RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Cdc37l1Q9CZP7 335 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 PalmQ9Z0P4 383 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Synj2Q9D2G5 1434 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Cgnl1Q6AW69 1298 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Shq1Q7TMX5 569 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Cdk19Q8BWD8 501 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Dnajc5gQ8C632 165 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Znf330Q922H9 316 aa16.38■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Gnai1B2RSH2 354 aa16.37■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Spryd3E9Q9B3 442 aa16.37■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Il4rP16382 810 aa16.37■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Gnai3Q9DC51 354 aa16.37■□□□□ 0.21
Ssr1-203ENSMUST00000225246 PplQ9R269 1755 aa16.36■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Aldh8a1Q8BH00 487 aa16.36■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Tbc1d9Q3UYK3 1264 aa16.35■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Spef2Q8C9J3 1734 aa16.35■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Sos1Q62245 1319 aa16.35■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Anapc15-psA0A140T8L6 141 aa16.35■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Trim27Q62158 513 aa16.34■□□□□ 0.21
Ssr1-203ENSMUST00000225246 1700010I14RikQ7TPG0 532 aa16.34■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Atp2b2Q9R0K7 1198 aa16.34■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Plcb2A3KGF7 1181 aa16.33■□□□□ 0.21
Ssr1-203ENSMUST00000225246 MarsQ68FL6 902 aaKnown RBP16.33■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Aldh1l2Q8K009 923 aa16.33■□□□□ 0.21
Ssr1-203ENSMUST00000225246 CenppQ9CZ92 286 aa16.33■□□□□ 0.21
Ssr1-203ENSMUST00000225246 CarsQ9ER72 831 aaKnown RBP16.33■□□□□ 0.21
Ssr1-203ENSMUST00000225246 Nutm1Q8BHP2 1126 aa16.33■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Cul9Q80TT8 1865 aa16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Rfx1P48377 963 aa16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Nwd1A6H603 1563 aa16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Map3k19E9Q3S4 1311 aa16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Mcm2P97310 904 aa16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Tmco5bQ80X59 307 aa16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 HnrnpuQ8VEK3 800 aaKnown RBP16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Gcc1Q9D4H2 778 aa16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Cdk12Q14AX6 1484 aaKnown RBP16.31■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Kif1aP33173 1695 aa16.3■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Nectin2P32507 530 aa16.3■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Utp14aQ640M1 767 aaKnown RBP16.3■□□□□ 0.2
Ssr1-203ENSMUST00000225246 EngaseQ8BX80 734 aa16.3■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Tfip11Q9ERA6 838 aaKnown RBP16.3■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Nek4Q9Z1J2 792 aa16.3■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Itsn1Q9Z0R4 1714 aa16.3■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Rsph4aQ8BYM7 716 aa16.29■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Yeats2Q3TUF7 1407 aa16.29■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Aplp1Q03157 653 aa16.29■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Hoxb7P09024 217 aa16.28■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Eif4g2Q62448 906 aaKnown RBP16.28■□□□□ 0.2
Ssr1-203ENSMUST00000225246 MlecQ6ZQI3 291 aaKnown RBP16.28■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Pknox2Q8BG99 474 aa16.28■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Casq1O09165 405 aa16.27■□□□□ 0.2
Ssr1-203ENSMUST00000225246 Kif13aQ9EQW7 1749 aa16.27■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Kif20bQ80WE4 1774 aaKnown RBP16.26■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Tm6sf1P58749 370 aa16.26■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Rnf123Q5XPI3 1314 aa16.26■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Paxip1Q6NZQ4 1056 aa16.26■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Rrp12Q6P5B0 1295 aaKnown RBP16.26■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Atp1b4Q99ME6 356 aa16.26■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Q9D9H8 365 aa16.26■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Rsph6aQ8CDR2 708 aa16.25■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Rab11fip3Q8CHD8 1047 aa16.25■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Elp1Q7TT37 1333 aaKnown RBP16.25■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Mdc1Q5PSV9 1707 aa16.25■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Uhrf1bp1lA2RSJ4 1457 aa16.24■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Ppip5k2Q6ZQB6 1129 aa16.24■□□□□ 0.19
Ssr1-203ENSMUST00000225246 PtpruB1AUH1 1446 aa16.24■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Phf23Q8BSN5 401 aa16.24■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Tmx3Q8BXZ1 456 aa16.24■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Bag4Q8CI61 457 aa16.24■□□□□ 0.19
Ssr1-203ENSMUST00000225246 ScaperF8VQ70 1398 aaKnown RBP16.23■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Kif24Q6NWW5 1356 aa16.23■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Nucb1Q02819 459 aaKnown RBP16.23■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Usp16Q99LG0 825 aa16.23■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Zc3h13E9Q784 1729 aaKnown RBP16.22■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Ddrgk1Q80WW9 315 aa16.22■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Idi2Q8BFZ6 227 aa16.22■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Ppp6r3Q922D4 844 aa16.22■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Adgrb1Q3UHD1 1582 aa16.22■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Ric3Q8BPM6 367 aa16.22■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Bloc1s4Q8VED2 215 aa16.22■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Dip2aQ8BWT5 1523 aa16.21■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Cyb5rlB1AS42 316 aa16.21■□□□□ 0.19
Ssr1-203ENSMUST00000225246 ImpactO55091 318 aa16.21■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Zkscan1Q8BGS3 561 aaKnown RBP16.21■□□□□ 0.19
Ssr1-203ENSMUST00000225246 GorabQ8BRM2 368 aa16.21■□□□□ 0.19
Ssr1-203ENSMUST00000225246 Pdia3P27773 505 aaKnown RBP16.2■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Rangap1P46061 589 aaKnown RBP16.2■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Chl1P70232 1209 aa16.2■□□□□ 0.18
Ssr1-203ENSMUST00000225246 PtmsQ9D0J8 101 aaKnown RBP16.2■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Trim44Q9QXA7 346 aa16.2■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Frmpd2A0A140LI67 1392 aa16.19■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Fam13aQ8BGI4 693 aa16.19■□□□□ 0.18
Ssr1-203ENSMUST00000225246 FanclQ9CR14 375 aa16.19■□□□□ 0.18
Ssr1-203ENSMUST00000225246 4930407I10RikD3Z5T8 1512 aa16.19■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Tet3Q8BG87 1668 aa16.18■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Cabp2Q9JLK4 216 aa16.18■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Brwd3A2AHJ4 1799 aa16.18■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Birc3O08863 600 aa16.17■□□□□ 0.18
Ssr1-203ENSMUST00000225246 SlkO54988 1233 aa16.17■□□□□ 0.18
Ssr1-203ENSMUST00000225246 Med1Q925J9 1575 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms