RNA–Protein interactions for RNA: ENSMUST00000185633.6

Xrn1-202, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 10,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-202ENSMUST00000185633 Usp35M0QWN7 1009 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 HnrnpuQ8VEK3 800 aaKnown RBP4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ipo9Q91YE6 1041 aa4.93□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Anapc15P60007 132 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Stard8Q8K031 1019 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ppm1eQ80TL0 749 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Tnks1bp1P58871 1720 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Rrp9Q91WM3 475 aaKnown RBP4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 InsrP15208 1372 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Eif4g2Q62448 906 aaKnown RBP4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Gpatch11Q3UFS4 262 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Tpm2P58774 284 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ak7Q9D2H2 614 aa4.92□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Sipa1l3G3X9J0 1776 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Sin3aQ60520 1274 aaKnown RBP4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Tcerg1Q8CGF7 1100 aaKnown RBP4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Paf1Q8K2T8 535 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Gtf3c5Q8R2T8 520 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Ccer1Q9CQL2 403 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 PalldQ9ET54 1408 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Mapk8ip3Q9ESN9 1337 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 AtrnQ9WU60 1428 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 ItpripQ3TNL8 555 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Atp7bQ64446 1462 aa4.91□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Spata24Q6P926 205 aa4.9□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Nid2O88322 1403 aa4.9□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Frmpd2A0A140LI67 1392 aa4.9□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Pde4cQ3UEI1 686 aa4.9□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Polr3gQ6NXY9 223 aa4.9□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Rtn4Q99P72 1162 aaKnown RBP4.9□□□□□ -1.62
Xrn1-202ENSMUST00000185633 Pnmal2G3X9N3 661 aa4.9□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Tiam2Q6ZPF3 1715 aa4.9□□□□□ -1.63
Xrn1-202ENSMUST00000185633 MypopQ8R4U1 393 aa4.9□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Sh3bp5Q9Z131 463 aa4.9□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Gm6268A2A3U9 297 aa4.9□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Ipo7Q9EPL8 1038 aaKnown RBP4.9□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Usp47Q8BY87 1376 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Gcom1E9PZ54 550 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 MyzapQ3UIJ9 466 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Hoxa7P02830 229 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 IqubQ8CDK3 788 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Tmem94Q7TSH8 1360 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Atp6v1dP57746 247 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Slc35g1Q8BY79 368 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Col16a1Q8BLX7 1580 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Ttll13A4Q9F6 804 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 GnpatP98192 678 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Arglu1Q3UL36 271 aaKnown RBP4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Kif3aP28741 701 aa4.89□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Abca15E9PWH4 1668 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 A0A1L1SQF0 893 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Brinp3Q499E0 766 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Sox12Q04890 314 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Znf521Q6KAS7 1311 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Sept11Q8C1B7 431 aaKnown RBP4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Rapgef3Q8VCC8 918 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Sept6Q9R1T4 434 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Prrc2bQ7TPM1 1486 aaKnown RBP4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 OptnQ8K3K8 584 aa4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 SafbD3YXK2 937 aaKnown RBP4.88□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Smc2Q8CG48 1191 aaKnown RBP4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Paip2Q9D6V8 124 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Rreb1Q3UH06 1700 aaKnown RBP4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Shank3Q4ACU6 1730 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Sart3Q9JLI8 962 aaKnown RBP4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Znf710Q3U288 666 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Tpd52l1O54818 204 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Sparcl1P70663 650 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Rsph3aQ3UFY4 516 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Pmfbp1Q9WVQ0 1022 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 AcrbpQ3V140 540 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Mterf4Q8BVN4 346 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Stk26Q99JT2 416 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Q9D9H8 365 aa4.87□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Mns1Q61884 491 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Rwdd1Q9CQK7 243 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Chmp5Q9D7S9 219 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 TimelessQ9R1X4 1197 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Myh10Q61879 1976 aaKnown RBP4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 4921530L21RikQ9CQ47 274 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Rad17Q6NXW6 688 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 PtpruB1AUH1 1446 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 EzrP26040 586 aaKnown RBP4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Rassf8Q8CJ96 419 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 EspnQ9ET47 871 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Nup155Q99P88 1391 aaKnown RBP4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 ScaperF8VQ70 1398 aaKnown RBP4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 HmmrQ00547 794 aaKnown RBP4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Peak1Q69Z38 1735 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Dydc1Q9D9T0 175 aa4.86□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Col18a1P39061 1774 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Plekhh1Q80TI1 1356 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Clstn1Q9EPL2 979 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Hmgn5Q9JL35 406 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Hook1Q8BIL5 728 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Iffo2Q8R2V2 512 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Dlg5E9Q9R9 1921 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Nsd3Q6P2L6 1439 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Ccdc173A0JLY1 547 aa4.85□□□□□ -1.63
Xrn1-202ENSMUST00000185633 Nup153E9Q3G8 1462 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms