RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 Slc12a5Q91V14 1138 aa16.86■□□□□ 0.29
Usf1-208ENSMUST00000161241 Tfip11Q9ERA6 838 aaKnown RBP16.86■□□□□ 0.29
Usf1-208ENSMUST00000161241 NinlQ6ZQ12 1394 aa16.86■□□□□ 0.29
Usf1-208ENSMUST00000161241 Cdc37l1Q9CZP7 335 aa16.85■□□□□ 0.29
Usf1-208ENSMUST00000161241 Stk26Q99JT2 416 aa16.85■□□□□ 0.29
Usf1-208ENSMUST00000161241 CarsQ9ER72 831 aaKnown RBP16.85■□□□□ 0.29
Usf1-208ENSMUST00000161241 Tmco5bQ80X59 307 aa16.84■□□□□ 0.29
Usf1-208ENSMUST00000161241 PalmQ9Z0P4 383 aa16.84■□□□□ 0.29
Usf1-208ENSMUST00000161241 Ptch1Q61115 1434 aa16.84■□□□□ 0.29
Usf1-208ENSMUST00000161241 Anapc15-psA0A140T8L6 141 aa16.84■□□□□ 0.29
Usf1-208ENSMUST00000161241 Casq1O09165 405 aa16.84■□□□□ 0.29
Usf1-208ENSMUST00000161241 Nek4Q9Z1J2 792 aa16.84■□□□□ 0.29
Usf1-208ENSMUST00000161241 Gnai1B2RSH2 354 aa16.83■□□□□ 0.28
Usf1-208ENSMUST00000161241 Cavin2Q63918 418 aaKnown RBP16.83■□□□□ 0.28
Usf1-208ENSMUST00000161241 Aldh8a1Q8BH00 487 aa16.83■□□□□ 0.28
Usf1-208ENSMUST00000161241 Gnai3Q9DC51 354 aa16.83■□□□□ 0.28
Usf1-208ENSMUST00000161241 SlkO54988 1233 aa16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 Nectin2P32507 530 aa16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 Trim27Q62158 513 aa16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 DekQ7TNV0 380 aaKnown RBP16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 HnrnpuQ8VEK3 800 aaKnown RBP16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 CenppQ9CZ92 286 aa16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 Aplp1Q03157 653 aa16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 Zranb1Q7M760 708 aa16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 Prrc2bQ7TPM1 1486 aaKnown RBP16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 Cep170bQ80U49 1574 aa16.82■□□□□ 0.28
Usf1-208ENSMUST00000161241 PtprmP28828 1452 aa16.81■□□□□ 0.28
Usf1-208ENSMUST00000161241 Rangap1P46061 589 aaKnown RBP16.81■□□□□ 0.28
Usf1-208ENSMUST00000161241 RereQ80TZ9 1558 aa16.81■□□□□ 0.28
Usf1-208ENSMUST00000161241 Trap1aP19473 224 aa16.81■□□□□ 0.28
Usf1-208ENSMUST00000161241 Mcm2P97310 904 aa16.81■□□□□ 0.28
Usf1-208ENSMUST00000161241 DmtnQ9WV69 405 aa16.81■□□□□ 0.28
Usf1-208ENSMUST00000161241 ScaperF8VQ70 1398 aaKnown RBP16.8■□□□□ 0.28
Usf1-208ENSMUST00000161241 Gcc1Q9D4H2 778 aa16.8■□□□□ 0.28
Usf1-208ENSMUST00000161241 NktrP30415 1453 aa16.8■□□□□ 0.28
Usf1-208ENSMUST00000161241 Ppp1r15aP17564 657 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 PogkQ80TC5 607 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 GorabQ8BRM2 368 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Tmx3Q8BXZ1 456 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Bag4Q8CI61 457 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Plekhg1F6S200 1446 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Spef2Q8C9J3 1734 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Dip2cE9PWR4 1557 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Synj2Q9D2G5 1434 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Eif4g2Q62448 906 aaKnown RBP16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Shq1Q7TMX5 569 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Cdk19Q8BWD8 501 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 EngaseQ8BX80 734 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Sos1Q62245 1319 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Abca14E9Q8F8 1683 aa16.79■□□□□ 0.28
Usf1-208ENSMUST00000161241 Tpm2P58774 284 aa16.78■□□□□ 0.28
Usf1-208ENSMUST00000161241 Qser1A2BIE1 1698 aa16.78■□□□□ 0.28
Usf1-208ENSMUST00000161241 Clcn1Q64347 994 aa16.78■□□□□ 0.28
Usf1-208ENSMUST00000161241 Aldh1l2Q8K009 923 aa16.77■□□□□ 0.28
Usf1-208ENSMUST00000161241 Ahdc1Q6PAL7 1594 aaKnown RBP16.77■□□□□ 0.28
Usf1-208ENSMUST00000161241 Bloc1s4Q8VED2 215 aa16.77■□□□□ 0.27
Usf1-208ENSMUST00000161241 PplQ9R269 1755 aa16.76■□□□□ 0.27
Usf1-208ENSMUST00000161241 ImpactO55091 318 aa16.76■□□□□ 0.27
Usf1-208ENSMUST00000161241 MarsQ68FL6 902 aaKnown RBP16.76■□□□□ 0.27
Usf1-208ENSMUST00000161241 Ppip5k2Q6ZQB6 1129 aa16.76■□□□□ 0.27
Usf1-208ENSMUST00000161241 Atp2b2Q9R0K7 1198 aa16.76■□□□□ 0.27
Usf1-208ENSMUST00000161241 Kif20bQ80WE4 1774 aaKnown RBP16.75■□□□□ 0.27
Usf1-208ENSMUST00000161241 Zkscan1Q8BGS3 561 aaKnown RBP16.75■□□□□ 0.27
Usf1-208ENSMUST00000161241 Atp1b4Q99ME6 356 aa16.75■□□□□ 0.27
Usf1-208ENSMUST00000161241 PtmsQ9D0J8 101 aaKnown RBP16.75■□□□□ 0.27
Usf1-208ENSMUST00000161241 Elp1Q7TT37 1333 aaKnown RBP16.74■□□□□ 0.27
Usf1-208ENSMUST00000161241 Pdcl2Q78Y63 240 aa16.74■□□□□ 0.27
Usf1-208ENSMUST00000161241 Znf692Q3U381 531 aa16.73■□□□□ 0.27
Usf1-208ENSMUST00000161241 Dnajc5gQ8C632 165 aa16.73■□□□□ 0.27
Usf1-208ENSMUST00000161241 Cul9Q80TT8 1865 aa16.73■□□□□ 0.27
Usf1-208ENSMUST00000161241 Dhx16G3X8X0 1044 aaKnown RBP16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Rab11fip3Q8CHD8 1047 aa16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Dmrtc1Q9D9R7 182 aa16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Kif1aP33173 1695 aa16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Nucb1Q02819 459 aaKnown RBP16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Utp14aQ640M1 767 aaKnown RBP16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Ppp6r3Q922D4 844 aa16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Usp16Q99LG0 825 aa16.72■□□□□ 0.27
Usf1-208ENSMUST00000161241 Tm6sf1P58749 370 aa16.71■□□□□ 0.27
Usf1-208ENSMUST00000161241 Tex2Q6ZPJ0 1128 aaKnown RBP16.71■□□□□ 0.27
Usf1-208ENSMUST00000161241 Ric3Q8BPM6 367 aa16.71■□□□□ 0.27
Usf1-208ENSMUST00000161241 Cdk12Q14AX6 1484 aaKnown RBP16.71■□□□□ 0.27
Usf1-208ENSMUST00000161241 Rasa1E9PYG6 1038 aa16.71■□□□□ 0.27
Usf1-208ENSMUST00000161241 Ccdc146E9Q9F7 977 aa16.71■□□□□ 0.27
Usf1-208ENSMUST00000161241 Pdia3P27773 505 aaKnown RBP16.7■□□□□ 0.26
Usf1-208ENSMUST00000161241 Mdc1Q5PSV9 1707 aa16.7■□□□□ 0.26
Usf1-208ENSMUST00000161241 Map3k19E9Q3S4 1311 aa16.7■□□□□ 0.26
Usf1-208ENSMUST00000161241 Fez1Q8K0X8 392 aa16.7■□□□□ 0.26
Usf1-208ENSMUST00000161241 Uhrf1bp1lA2RSJ4 1457 aa16.69■□□□□ 0.26
Usf1-208ENSMUST00000161241 FanclQ9CR14 375 aa16.68■□□□□ 0.26
Usf1-208ENSMUST00000161241 Rnf123Q5XPI3 1314 aa16.68■□□□□ 0.26
Usf1-208ENSMUST00000161241 Kif24Q6NWW5 1356 aa16.68■□□□□ 0.26
Usf1-208ENSMUST00000161241 VgfQ0VGU4 617 aa16.67■□□□□ 0.26
Usf1-208ENSMUST00000161241 Nwd1A6H603 1563 aa16.67■□□□□ 0.26
Usf1-208ENSMUST00000161241 Fam13aQ8BGI4 693 aa16.67■□□□□ 0.26
Usf1-208ENSMUST00000161241 Rsph6aQ8CDR2 708 aa16.67■□□□□ 0.26
Usf1-208ENSMUST00000161241 Rtn4Q99P72 1162 aaKnown RBP16.67■□□□□ 0.26
Usf1-208ENSMUST00000161241 Cyp27a1Q9DBG1 533 aa16.67■□□□□ 0.26
Usf1-208ENSMUST00000161241 Ush1cQ9ES64 910 aa16.67■□□□□ 0.26
Usf1-208ENSMUST00000161241 Alpk3Q924C5 1678 aa16.66■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms