RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Pmfbp1Q9WVQ0 1022 aa17.2■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Nat10Q8K224 1024 aaKnown RBP17.2■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Tspyl2Q7TQI8 677 aa17.19■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Arhgef12Q8R4H2 1543 aaKnown RBP17.19■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Ppp4r3bQ922R5 820 aa17.19■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 PalmQ9Z0P4 383 aa17.19■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Plb1Q3TTY0 1478 aa17.19■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Tmco3Q8BH01 678 aa17.19■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Jakmip1Q8BVL9 626 aa17.19■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Cabp2Q9JLK4 216 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Srgap3Q812A2 1099 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Top1mtQ8R4U6 593 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Rbm10Q99KG3 930 aaKnown RBP17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Ttc21bQ0HA38 1315 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Cfap58B2RW38 873 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Pip4k2aO70172 405 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Stk38Q91VJ4 465 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 TefQ9JLC6 301 aa17.18■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Nap1l1P28656 391 aaKnown RBP17.17■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Tbc1d32Q3URV1 1296 aa17.17■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 PaskQ8CEE6 1383 aa17.17■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Cct4P80315 539 aaKnown RBP17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 IbspQ61711 324 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Ptpdc1Q6NZK8 747 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Grin2aP35436 1464 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 A0A0U1RNP2 1173 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Liat1Q810M6 228 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Gimap6Q8K349 305 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Tfip11Q9ERA6 838 aaKnown RBP17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Samd1D3YXK1 519 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Cnnm3Q32NY4 713 aa17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Rbm28Q8CGC6 750 aaKnown RBP17.16■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Cwc27Q3TKY6 469 aa17.15■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Sycp1Q62209 993 aa17.15■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Otud6bQ8K2H2 294 aa17.15■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Wdr33Q8K4P0 1330 aaKnown RBP17.15■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 MpripP97434 1024 aa17.15■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Phldb2Q8K1N2 1249 aa17.15■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Ppip5k1A2ARP1 1436 aa17.14■□□□□ 0.34
Pcdha11-202ENSMUST00000115657 Eva1cP58659 440 aa17.14■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Eif4g1Q6NZJ6 1600 aaKnown RBP17.14■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Cdc45Q9Z1X9 566 aa17.14■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Terf2O35144 541 aa17.14■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 3425401B19RikD3Z1D3 1412 aa17.13■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 CalrP14211 416 aaKnown RBP17.13■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 FosbP13346 338 aa17.13■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Gtf2f1Q3THK3 508 aaKnown RBP17.13■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Fmnl2A2APV2 1086 aa17.13■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Jakmip2D3YXK0 820 aa17.13■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Paf1Q8K2T8 535 aa17.12■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Strn4P58404 760 aa17.12■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Stk11ipQ3TAA7 1072 aa17.12■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Cep112Q5PR68 954 aa17.12■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Stard3nlQ9DCI3 235 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Mctp1E9PV86 951 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Cdkl5Q3UTQ8 938 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Plekhm2Q80TQ5 1018 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Rapgef6Q5NCJ1 1609 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Gpatch8A2A6A1 1505 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Bag1Q60739 355 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Syce3B5KM66 88 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Kiaa0753Q6A000 959 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 CastP51125 788 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Hvcn1Q3U2S8 269 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Mum1Q6DID5 682 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Dennd6aQ8BH65 605 aa17.11■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Peg3Q3URU2 1571 aa17.1■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Uspl1Q3ULM6 1089 aa17.1■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Commd10Q8JZY2 202 aa17.1■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Rcan3Q9JKK0 239 aa17.09■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Luc7lQ9CYI4 371 aaKnown RBP17.09■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Def6Q8C2K1 630 aa17.08■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Gse1Q3U3C9 1213 aa17.08■□□□□ 0.33
Pcdha11-202ENSMUST00000115657 Prl7d1P04769 244 aa17.08■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 TmpoQ61033 693 aaKnown RBP17.08■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Ercc6lQ8BHK9 1240 aa17.08■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Erc1Q99MI1 1120 aa17.08■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 CenpqQ9CPQ5 267 aa17.08■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Agtpbp1Q641K1 1218 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 AI481877A2ALV5 1481 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Cpsf1Q9EPU4 1441 aaKnown RBP17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 SelenooQ9DBC0 667 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Zmym3Q9JLM4 1370 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Gm10471E9Q1C7 252 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Erlin2Q8BFZ9 340 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 NefhP19246 1090 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 BcanQ61361 883 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Slu7Q8BHJ9 585 aa17.07■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Pdia4P08003 638 aaKnown RBP17.06■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Spag5Q7TME2 1165 aa17.06■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Ankrd44B2RXR6 993 aa17.06■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Ccdc102aQ3TMW1 549 aa17.06■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Mrvi1Q9WUX5 899 aaKnown RBP17.06■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Zpr1Q62384 459 aa17.06■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 ImmtQ8CAQ8 757 aaKnown RBP17.06■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 TnnQ80Z71 1560 aa17.05■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Wdr63B2RY71 923 aa17.05■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Samm50Q8BGH2 469 aa17.05■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Bag4Q8CI61 457 aa17.05■□□□□ 0.32
Pcdha11-202ENSMUST00000115657 Cfap45Q9D9U9 551 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms