RNA–Protein interactions for RNA: ENSMUST00000113696.7

Tpm1-212, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-212ENSMUST00000113696 Robo1O89026 1612 aa27.01■■□□□ 1.91
Tpm1-212ENSMUST00000113696 Map4k4P97820 1233 aaKnown RBP26.99■■□□□ 1.91
Tpm1-212ENSMUST00000113696 MpripP97434 1024 aa26.99■■□□□ 1.91
Tpm1-212ENSMUST00000113696 Fchsd2Q3USJ8 740 aa26.99■■□□□ 1.91
Tpm1-212ENSMUST00000113696 Eya1P97767 591 aa26.97■■□□□ 1.91
Tpm1-212ENSMUST00000113696 Rtl5Q5DTT4 599 aa26.97■■□□□ 1.91
Tpm1-212ENSMUST00000113696 Tcerg1Q8CGF7 1100 aaKnown RBP26.97■■□□□ 1.91
Tpm1-212ENSMUST00000113696 PtprvP70289 1705 aa26.96■■□□□ 1.91
Tpm1-212ENSMUST00000113696 OptnQ8K3K8 584 aa26.93■■□□□ 1.9
Tpm1-212ENSMUST00000113696 Mapk8ip3Q9ESN9 1337 aa26.93■■□□□ 1.9
Tpm1-212ENSMUST00000113696 CrklP47941 303 aa26.93■■□□□ 1.9
Tpm1-212ENSMUST00000113696 Slx1bQ8BX32 270 aa26.93■■□□□ 1.9
Tpm1-212ENSMUST00000113696 TkfcQ8VC30 578 aa26.93■■□□□ 1.9
Tpm1-212ENSMUST00000113696 Nyap1Q6PFX7 833 aa26.92■■□□□ 1.9
Tpm1-212ENSMUST00000113696 Ptpn23Q6PB44 1692 aa26.9■■□□□ 1.9
Tpm1-212ENSMUST00000113696 Kdm6aO70546 1401 aa26.9■■□□□ 1.9
Tpm1-212ENSMUST00000113696 Apaf1O88879 1249 aa26.9■■□□□ 1.9
Tpm1-212ENSMUST00000113696 Slit2Q9R1B9 1521 aa26.89■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Pard3Q99NH2 1333 aa26.88■■□□□ 1.89
Tpm1-212ENSMUST00000113696 RgmbQ7TQ33 436 aa26.88■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Plin1Q8CGN5 517 aa26.88■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Usp19Q3UJD6 1360 aa26.87■■□□□ 1.89
Tpm1-212ENSMUST00000113696 TnikP83510 1323 aa26.87■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Mcm10Q0VBD2 885 aa26.87■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Uspl1Q3ULM6 1089 aa26.87■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Stk31Q99MW1 1018 aa26.87■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Iqcf3Q9D498 203 aa26.87■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Plekhd1B2RPU2 505 aa26.86■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Emilin2Q8K482 1074 aa26.86■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Sema6bO54951 886 aa26.85■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Col15a1O35206 1367 aa26.84■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Q4VA45 678 aa26.84■■□□□ 1.89
Tpm1-212ENSMUST00000113696 CrbnQ8C7D2 445 aa26.84■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Rab11fip3Q8CHD8 1047 aa26.84■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Zeb2Q9R0G7 1215 aa26.84■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Gsdma3Q5Y4Y6 464 aa26.83■■□□□ 1.89
Tpm1-212ENSMUST00000113696 Gm10471E9Q1C7 252 aa26.82■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Pak3Q61036 559 aa26.82■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Zranb3Q6NZP1 1069 aa26.82■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Cntnap1O54991 1385 aa26.81■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Parp14Q2EMV9 1817 aa26.81■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Rad21Q61550 635 aaKnown RBP26.81■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Ciz1Q8VEH2 845 aa26.81■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Znf541Q0GGX2 1363 aa26.81■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Slit1Q80TR4 1531 aa26.8■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Cavin4A2AMM0 362 aa26.8■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Aplp2Q06335 707 aa26.8■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Zpr1Q62384 459 aa26.8■■□□□ 1.88
Tpm1-212ENSMUST00000113696 HypkQ9CR41 129 aa26.8■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Ofd1Q80Z25 1017 aa26.79■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Cabp2Q9JLK4 216 aa26.79■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Spef2Q8C9J3 1734 aa26.78■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Ppp1r37Q8BKR5 712 aa26.78■■□□□ 1.88
Tpm1-212ENSMUST00000113696 MypopQ8R4U1 393 aa26.77■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Speer4f1Q9D5Q6 258 aa26.77■■□□□ 1.88
Tpm1-212ENSMUST00000113696 Simc1E9Q6E9 1354 aa26.77■■□□□ 1.88
Tpm1-212ENSMUST00000113696 TmpoQ61033 693 aaKnown RBP26.74■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Ncbp3Q8BZR9 615 aaKnown RBP26.74■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Dusp27Q148W8 1138 aa26.73■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Larp1bA0A0A6YXJ7 370 aaKnown RBP26.73■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Psrc1Q9D0P7 329 aa26.73■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Swt1Q9DBQ9 907 aa26.73■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Zfp444Q3TDV8 331 aaKnown RBP26.72■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Ralbp1Q62172 648 aa26.72■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Fnbp4Q6ZQ03 1031 aa26.72■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Cc2d1aQ8K1A6 943 aa26.72■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Neurod2Q62414 383 aa26.71■■□□□ 1.87
Tpm1-212ENSMUST00000113696 Nhsl1Q8CAF4 1587 aa26.7■■□□□ 1.86
Tpm1-212ENSMUST00000113696 InhbeO08717 350 aa26.7■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Amotl1Q9D4H4 968 aa26.7■■□□□ 1.86
Tpm1-212ENSMUST00000113696 ThemisQ8BGW0 636 aa26.69■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Lrp6O88572 1613 aa26.68■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Uhrf1bp1B2KF50 1429 aa26.68■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Sf3b2Q3UJB0 878 aaKnown RBP26.68■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Eno4Q8C042 619 aa26.67■■□□□ 1.86
Tpm1-212ENSMUST00000113696 4930572O03RikQ8C5Y0 211 aa26.66■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Ccdc129Q14B48 1034 aa26.65■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Pm20d1Q8C165 503 aa26.65■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Fam50bQ9WTJ8 334 aa26.65■■□□□ 1.86
Tpm1-212ENSMUST00000113696 Rtf1A2AQ19 715 aaKnown RBP26.64■■□□□ 1.85
Tpm1-212ENSMUST00000113696 Shank2Q80Z38 1476 aa26.64■■□□□ 1.85
Tpm1-212ENSMUST00000113696 Cypt2Q6P924 180 aa26.62■■□□□ 1.85
Tpm1-212ENSMUST00000113696 Ccdc30Q8BVF4 654 aa26.62■■□□□ 1.85
Tpm1-212ENSMUST00000113696 FocadA2AKG8 1798 aa26.6■■□□□ 1.85
Tpm1-212ENSMUST00000113696 Atxn3Q9CVD2 355 aa26.59■■□□□ 1.85
Tpm1-212ENSMUST00000113696 Znf710Q3U288 666 aa26.59■■□□□ 1.85
Tpm1-212ENSMUST00000113696 Dmrt2Q8BG36 561 aa26.59■■□□□ 1.85
Tpm1-212ENSMUST00000113696 Speer4bQ9D9F7 267 aa26.56■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Ginm1Q91WR6 327 aa26.56■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Anks4bQ8K3X6 423 aa26.55■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Gm21680A0A0G2JGR8 267 aa26.54■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Nup153E9Q3G8 1462 aaKnown RBP26.54■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Aox2Q5SGK3 1345 aa26.54■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Snap23O09044 210 aa26.53■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Trpm3Q5F4S9 1721 aa26.53■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Eif3bQ8JZQ9 803 aaKnown RBP26.53■■□□□ 1.84
Tpm1-212ENSMUST00000113696 Kcnh4A2A5F7 1018 aa26.51■■□□□ 1.83
Tpm1-212ENSMUST00000113696 Adgrb1Q3UHD1 1582 aa26.51■■□□□ 1.83
Tpm1-212ENSMUST00000113696 Phkg2Q9DB30 406 aa26.51■■□□□ 1.83
Tpm1-212ENSMUST00000113696 Ankrd23Q812A3 306 aa26.51■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms