RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Cdc37l1Q9CZP7 335 aa13.82□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Ccdc171E9Q1U1 1324 aa13.81□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Gm21190A0A0G2JGJ6 266 aa13.81□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Cabp4Q8VHC5 271 aa13.81□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Duxf3A0A0N4SV92 674 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Ttll13A4Q9F6 804 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Egfem1Q8C088 590 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Smc5Q8CG46 1101 aaKnown RBP13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Stk31Q99MW1 1018 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Slit2Q9R1B9 1521 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Gnai1B2RSH2 354 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 AampJ3QN89 436 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Gnai3Q9DC51 354 aa13.8□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Ccdc60Q8C4J0 545 aa13.79□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Plin1Q8CGN5 517 aa13.79□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Iqcf3Q9D498 203 aa13.79□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Ppp1r3fQ9JIG4 799 aa13.79□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Scaf1Q5U4C3 1256 aaKnown RBP13.78□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Rad17Q6NXW6 688 aa13.78□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Ptpn23Q6PB44 1692 aa13.78□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Ano8Q6PB70 1060 aa13.78□□□□□ -0.2
Ttc39a-202ENSMUST00000106618 Vamp4O70480 141 aa13.77□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Eya1P97767 591 aa13.77□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 G3bp1P97855 465 aaKnown RBP13.77□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Tet3Q8BG87 1668 aa13.77□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Rlbp1Q9Z275 317 aa13.76□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Robo1O89026 1612 aa13.76□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Ncapd2Q8K2Z4 1392 aa13.76□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Hoxc9P09633 260 aa13.76□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Zfp777B9EKF4 885 aa13.75□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 B4galnt3Q6L8S8 986 aa13.75□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Slain2Q8CI08 581 aa13.75□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Col18a1P39061 1774 aa13.75□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Nfat5Q9WV30 1534 aa13.75□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Ncoa4Q5U4H9 625 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 TmpoQ61033 693 aaKnown RBP13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 EspnQ9ET47 871 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Trpm3Q5F4S9 1721 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Wdr17E9Q271 1322 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Wnk3Q80XP9 1757 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Ccne1Q61457 408 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Plekhm2Q80TQ5 1018 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Dbr1Q923B1 550 aa13.74□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Sos1Q62245 1319 aa13.73□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Gm6268A2A3U9 297 aa13.73□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Usp16Q99LG0 825 aa13.73□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Chmp5Q9D7S9 219 aa13.73□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Nsd3Q6P2L6 1439 aa13.73□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Tmem132eQ6IEE6 982 aa13.72□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Klhdc4Q921I2 584 aa13.72□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Scn4aQ9ER60 1841 aa13.72□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Fyb1O35601 819 aa13.72□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Maco1Q7TQE6 664 aaKnown RBP13.72□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 TimelessQ9R1X4 1197 aa13.72□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 KarsQ99MN1 595 aaKnown RBP13.71□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Senp3Q9EP97 568 aaKnown RBP13.71□□□□□ -0.21
Ttc39a-202ENSMUST00000106618 Adgrb1Q3UHD1 1582 aa13.71□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Gimap6Q8K349 305 aa13.71□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Siglec1Q62230 1695 aa13.71□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Ahnak2E9PYB0 1738 aaKnown RBP13.7□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Evi5lH3BKQ3 813 aa13.7□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Nectin2P32507 530 aa13.7□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Q3UPC7 1272 aa13.7□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 U2surpQ6NV83 1029 aaKnown RBP13.7□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Arfgef2A2A5R2 1792 aa13.7□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Rangap1P46061 589 aaKnown RBP13.69□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Cavin2Q63918 418 aaKnown RBP13.69□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Znf330Q922H9 316 aa13.69□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Tmco5bQ80X59 307 aa13.69□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Aldh1l1Q8R0Y6 902 aa13.69□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Rapgef3Q8VCC8 918 aa13.69□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Brwd3A2AHJ4 1799 aa13.68□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Kcna6Q61923 529 aa13.68□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Snap23O09044 210 aa13.67□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 MarsQ68FL6 902 aaKnown RBP13.67□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Nutm1Q8BHP2 1126 aa13.67□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Rab11fip3Q8CHD8 1047 aa13.67□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 TatQ8QZR1 454 aa13.67□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Prim1P20664 417 aa13.66□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Ggnbp2Q5SV77 696 aa13.66□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Farp2Q91VS8 1065 aa13.66□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Kcnh5Q920E3 988 aa13.66□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Ltbp4Q8K4G1 1666 aa13.66□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.65□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 HypkQ9CR41 129 aa13.65□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Dnajc10Q9DC23 793 aa13.65□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Rtf1A2AQ19 715 aaKnown RBP13.65□□□□□ -0.22
Ttc39a-202ENSMUST00000106618 Kdm6aO70546 1401 aa13.64□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Armcx1Q9CX83 456 aa13.64□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Gli3Q61602 1583 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Chl1P70232 1209 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 MvpQ9EQK5 861 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Myo5bP21271 1818 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Fmnl2A2APV2 1086 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Ankrd44B2RXR6 993 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 GnpatP98192 678 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Hs1bp3Q3TC93 395 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Atl3Q91YH5 541 aa13.63□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Nup153E9Q3G8 1462 aaKnown RBP13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 AU019823E9PUQ3 292 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 141.3 ms