RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 AU019823E9PUQ3 292 aa10.41□□□□□ -0.74
Syne1-202ENSMUST00000095899 Pdlim2Q8R1G6 349 aa10.41□□□□□ -0.74
Syne1-202ENSMUST00000095899 Sirt1Q923E4 737 aa10.41□□□□□ -0.74
Syne1-202ENSMUST00000095899 Parp14Q2EMV9 1817 aa10.41□□□□□ -0.74
Syne1-202ENSMUST00000095899 Nsd3Q6P2L6 1439 aa10.41□□□□□ -0.74
Syne1-202ENSMUST00000095899 Rsph6aQ8CDR2 708 aa10.4□□□□□ -0.74
Syne1-202ENSMUST00000095899 Kcnn1Q9EQR3 537 aa10.4□□□□□ -0.74
Syne1-202ENSMUST00000095899 Ccdc183A2AJB1 534 aa10.4□□□□□ -0.75
Syne1-202ENSMUST00000095899 Atp1b4Q99ME6 356 aa10.4□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ak7Q9D2H2 614 aa10.4□□□□□ -0.75
Syne1-202ENSMUST00000095899 Robo1O89026 1612 aa10.4□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ptpn23Q6PB44 1692 aa10.39□□□□□ -0.75
Syne1-202ENSMUST00000095899 CemipQ8BI06 1361 aa10.39□□□□□ -0.75
Syne1-202ENSMUST00000095899 Vamp4O70480 141 aa10.39□□□□□ -0.75
Syne1-202ENSMUST00000095899 Kif2cQ922S8 721 aa10.39□□□□□ -0.75
Syne1-202ENSMUST00000095899 Rbm25B2RY56 838 aaKnown RBP10.39□□□□□ -0.75
Syne1-202ENSMUST00000095899 Col18a1P39061 1774 aa10.39□□□□□ -0.75
Syne1-202ENSMUST00000095899 Txndc2Q6P902 515 aa10.38□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ppp1r9bQ6R891 817 aaKnown RBP10.38□□□□□ -0.75
Syne1-202ENSMUST00000095899 Maco1Q7TQE6 664 aaKnown RBP10.38□□□□□ -0.75
Syne1-202ENSMUST00000095899 Swt1Q9DBQ9 907 aa10.38□□□□□ -0.75
Syne1-202ENSMUST00000095899 Col14a1Q80X19 1797 aa10.38□□□□□ -0.75
Syne1-202ENSMUST00000095899 Hoxb7P09024 217 aa10.38□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ahnak2E9PYB0 1738 aaKnown RBP10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ppp2r3aB2RXC8 1150 aa10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 Sart3Q9JLI8 962 aaKnown RBP10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 Cdk12Q14AX6 1484 aaKnown RBP10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ccdc171E9Q1U1 1324 aa10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 Psme1P97371 249 aa10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 Hs1bp3Q3TC93 395 aa10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 Q3UPC7 1272 aa10.37□□□□□ -0.75
Syne1-202ENSMUST00000095899 MarsQ68FL6 902 aaKnown RBP10.36□□□□□ -0.75
Syne1-202ENSMUST00000095899 Mcm10Q0VBD2 885 aa10.36□□□□□ -0.75
Syne1-202ENSMUST00000095899 Phf23Q8BSN5 401 aa10.36□□□□□ -0.75
Syne1-202ENSMUST00000095899 Znf335A2A5K6 1337 aa10.36□□□□□ -0.75
Syne1-202ENSMUST00000095899 Phlpp2Q8BXA7 1320 aa10.36□□□□□ -0.75
Syne1-202ENSMUST00000095899 Cdc37l1Q9CZP7 335 aa10.36□□□□□ -0.75
Syne1-202ENSMUST00000095899 Tbc1d32Q3URV1 1296 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 4933416C03RikQ3V063 378 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ipo8Q7TMY7 1010 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Plekhm2Q80TQ5 1018 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Gtf3c5Q8R2T8 520 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Astn2Q80Z10 1352 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Arfgef2A2A5R2 1792 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Sipa1l2Q80TE4 1722 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Atl3Q91YH5 541 aa10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Eif2s2Q99L45 331 aaKnown RBP10.35□□□□□ -0.75
Syne1-202ENSMUST00000095899 Eif4a2P10630 407 aa10.34□□□□□ -0.75
Syne1-202ENSMUST00000095899 Dnai1Q8C0M8 701 aa10.34□□□□□ -0.75
Syne1-202ENSMUST00000095899 Ccdc60Q8C4J0 545 aa10.34□□□□□ -0.75
Syne1-202ENSMUST00000095899 Trim26Q99PN3 545 aa10.34□□□□□ -0.75
Syne1-202ENSMUST00000095899 Wnk3Q80XP9 1757 aa10.34□□□□□ -0.75
Syne1-202ENSMUST00000095899 KarsQ99MN1 595 aaKnown RBP10.33□□□□□ -0.76
Syne1-202ENSMUST00000095899 Gli3Q61602 1583 aa10.33□□□□□ -0.76
Syne1-202ENSMUST00000095899 C3P01027 1663 aa10.33□□□□□ -0.76
Syne1-202ENSMUST00000095899 Pdcl3Q8BVF2 240 aa10.33□□□□□ -0.76
Syne1-202ENSMUST00000095899 HnrnpmQ9D0E1 729 aaKnown RBP10.33□□□□□ -0.76
Syne1-202ENSMUST00000095899 Mre11Q61216 706 aa10.33□□□□□ -0.76
Syne1-202ENSMUST00000095899 Dlg5E9Q9R9 1921 aa10.32□□□□□ -0.76
Syne1-202ENSMUST00000095899 4930567H17RikQ3V0K5 233 aa10.32□□□□□ -0.76
Syne1-202ENSMUST00000095899 Aldh1l1Q8R0Y6 902 aa10.32□□□□□ -0.76
Syne1-202ENSMUST00000095899 DaxxO35613 739 aa10.32□□□□□ -0.76
Syne1-202ENSMUST00000095899 Znf316Q6PGE4 1016 aa10.32□□□□□ -0.76
Syne1-202ENSMUST00000095899 Kif24Q6NWW5 1356 aa10.32□□□□□ -0.76
Syne1-202ENSMUST00000095899 CanxP35564 591 aaKnown RBP10.32□□□□□ -0.76
Syne1-202ENSMUST00000095899 Msh6P54276 1358 aaKnown RBP10.31□□□□□ -0.76
Syne1-202ENSMUST00000095899 Brd1E9PZ26 1189 aaKnown RBP10.31□□□□□ -0.76
Syne1-202ENSMUST00000095899 G3bp1P97855 465 aaKnown RBP10.31□□□□□ -0.76
Syne1-202ENSMUST00000095899 Cavin2Q63918 418 aaKnown RBP10.31□□□□□ -0.76
Syne1-202ENSMUST00000095899 Birc3O08863 600 aa10.31□□□□□ -0.76
Syne1-202ENSMUST00000095899 Armcx1Q9CX83 456 aa10.31□□□□□ -0.76
Syne1-202ENSMUST00000095899 Cabp2Q9JLK4 216 aa10.31□□□□□ -0.76
Syne1-202ENSMUST00000095899 Klhdc4Q921I2 584 aa10.3□□□□□ -0.76
Syne1-202ENSMUST00000095899 Ankrd44B2RXR6 993 aa10.3□□□□□ -0.76
Syne1-202ENSMUST00000095899 Ppm1gQ61074 542 aa10.3□□□□□ -0.76
Syne1-202ENSMUST00000095899 Polr3glQ8R0C0 218 aa10.3□□□□□ -0.76
Syne1-202ENSMUST00000095899 Q3UJC8 639 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Nutm1Q8BHP2 1126 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Nfat5Q9WV30 1534 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Trim30dE9PWL0 497 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Nectin2P32507 530 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Chl1P70232 1209 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 MvpQ9EQK5 861 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Tns3Q5SSZ5 1440 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Sptbn5F6UCX4 1208 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Idi1P58044 227 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 FancaQ9JL70 1439 aa10.29□□□□□ -0.76
Syne1-202ENSMUST00000095899 Gnai1B2RSH2 354 aa10.28□□□□□ -0.76
Syne1-202ENSMUST00000095899 Gnai3Q9DC51 354 aa10.28□□□□□ -0.76
Syne1-202ENSMUST00000095899 Ecm2Q5FW85 670 aa10.28□□□□□ -0.76
Syne1-202ENSMUST00000095899 BcorQ8CGN4 1759 aa10.28□□□□□ -0.76
Syne1-202ENSMUST00000095899 Siglec1Q62230 1695 aa10.27□□□□□ -0.76
Syne1-202ENSMUST00000095899 Znf330Q922H9 316 aa10.27□□□□□ -0.76
Syne1-202ENSMUST00000095899 Gtf2a1Q99PM3 378 aa10.27□□□□□ -0.76
Syne1-202ENSMUST00000095899 Antxr1Q9CZ52 562 aa10.27□□□□□ -0.76
Syne1-202ENSMUST00000095899 Sos1Q62245 1319 aa10.27□□□□□ -0.76
Syne1-202ENSMUST00000095899 Aplp1Q03157 653 aa10.27□□□□□ -0.77
Syne1-202ENSMUST00000095899 Cluap1Q8R3P7 413 aa10.27□□□□□ -0.77
Syne1-202ENSMUST00000095899 LifrP42703 1092 aa10.27□□□□□ -0.77
Syne1-202ENSMUST00000095899 Kif18aQ91WD7 886 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms