RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Trpm3Q5F4S9 1721 aa14.56□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Robo1O89026 1612 aa14.55□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Gnai1B2RSH2 354 aa14.55□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Rbm25B2RY56 838 aaKnown RBP14.55□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Stk31Q99MW1 1018 aa14.55□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Gnai3Q9DC51 354 aa14.55□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Siglec1Q62230 1695 aa14.55□□□□□ -0.08
Vamp1-202ENSMUST00000063588 FancaQ9JL70 1439 aa14.54□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Sos1Q62245 1319 aa14.53□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Fam71e1A1L3C1 212 aa14.53□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Ncoa4Q5U4H9 625 aa14.53□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Ncapd2Q8K2Z4 1392 aa14.53□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Brwd3A2AHJ4 1799 aa14.53□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Liat1Q810M6 228 aa14.52□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Rab11fip3Q8CHD8 1047 aa14.52□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Gimap6Q8K349 305 aa14.52□□□□□ -0.08
Vamp1-202ENSMUST00000063588 Gm21190A0A0G2JGJ6 266 aa14.51□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Pank1Q8K4K6 548 aa14.51□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Cabp4Q8VHC5 271 aa14.51□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Cdc37l1Q9CZP7 335 aa14.51□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Arfgef2A2A5R2 1792 aa14.51□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Nfat5Q9WV30 1534 aa14.5□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Slc4a3P16283 1227 aa14.5□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Myo5bP21271 1818 aa14.5□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Polr3glQ8R0C0 218 aa14.49□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Cabp2Q9JLK4 216 aa14.49□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Wdr17E9Q271 1322 aa14.49□□□□□ -0.09
Vamp1-202ENSMUST00000063588 MpripP97434 1024 aa14.49□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Smc5Q8CG46 1101 aaKnown RBP14.49□□□□□ -0.09
Vamp1-202ENSMUST00000063588 TimelessQ9R1X4 1197 aa14.49□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Scn4aQ9ER60 1841 aa14.48□□□□□ -0.09
Vamp1-202ENSMUST00000063588 G3bp1P97855 465 aaKnown RBP14.48□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Mcm10Q0VBD2 885 aa14.48□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Cavin2Q63918 418 aaKnown RBP14.48□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Tspyl2Q7TQI8 677 aa14.48□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Ccdc60Q8C4J0 545 aa14.48□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Tet3Q8BG87 1668 aa14.47□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Fyb1O35601 819 aa14.47□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Hoxc9P09633 260 aa14.47□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Slain2Q8CI08 581 aa14.47□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Vamp4O70480 141 aa14.46□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Kcna6Q61923 529 aa14.46□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Slc35g1Q8BY79 368 aa14.46□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Kcnh5Q920E3 988 aa14.46□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Trim26Q99PN3 545 aa14.46□□□□□ -0.09
Vamp1-202ENSMUST00000063588 EspnQ9ET47 871 aa14.46□□□□□ -0.09
Vamp1-202ENSMUST00000063588 Nckap5lQ6GQX2 1323 aa14.46□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Ttll13A4Q9F6 804 aa14.45□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Eya1P97767 591 aa14.45□□□□□ -0.1
Vamp1-202ENSMUST00000063588 TmpoQ61033 693 aaKnown RBP14.45□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Amer1Q7TS75 1132 aa14.45□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Ahnak2E9PYB0 1738 aaKnown RBP14.44□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Duxf3A0A0N4SV92 674 aa14.44□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Rapgef3Q8VCC8 918 aa14.44□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Kdm6aO70546 1401 aa14.43□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Adgrb1Q3UHD1 1582 aa14.43□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Hs1bp3Q3TC93 395 aa14.42□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Plekhm2Q80TQ5 1018 aa14.42□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Usp16Q99LG0 825 aa14.42□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Gsdma3Q5Y4Y6 464 aa14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Ccne1Q61457 408 aa14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Aldh1l1Q8R0Y6 902 aa14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 KarsQ99MN1 595 aaKnown RBP14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 HypkQ9CR41 129 aa14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Chmp5Q9D7S9 219 aa14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Chmp4bQ9D8B3 224 aaKnown RBP14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Nsd3Q6P2L6 1439 aa14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Farp2Q91VS8 1065 aa14.41□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Gli3Q61602 1583 aa14.4□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Fmnl2A2APV2 1086 aa14.4□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Rtf1A2AQ19 715 aaKnown RBP14.4□□□□□ -0.1
Vamp1-202ENSMUST00000063588 TatQ8QZR1 454 aa14.4□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Atl3Q91YH5 541 aa14.4□□□□□ -0.1
Vamp1-202ENSMUST00000063588 Ltbp4Q8K4G1 1666 aa14.39□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Gm6268A2A3U9 297 aa14.39□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Igsf1Q7TQA1 1317 aa14.39□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Evi5lH3BKQ3 813 aa14.38□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Q3UPC7 1272 aa14.38□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Maco1Q7TQE6 664 aaKnown RBP14.38□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Plin1Q8CGN5 517 aa14.38□□□□□ -0.11
Vamp1-202ENSMUST00000063588 DccP70211 1447 aa14.38□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Dlg5E9Q9R9 1921 aa14.37□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Nid2O88322 1403 aa14.37□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Atf3Q60765 181 aa14.37□□□□□ -0.11
Vamp1-202ENSMUST00000063588 MarsQ68FL6 902 aaKnown RBP14.37□□□□□ -0.11
Vamp1-202ENSMUST00000063588 TnrQ8BYI9 1358 aa14.36□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Cyb5rlB1AS42 316 aa14.36□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Tmem132eQ6IEE6 982 aa14.36□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Amotl1Q9D4H4 968 aa14.36□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Rlbp1Q9Z275 317 aa14.36□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Nup153E9Q3G8 1462 aaKnown RBP14.35□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Pak3Q61036 559 aa14.35□□□□□ -0.11
Vamp1-202ENSMUST00000063588 U2surpQ6NV83 1029 aaKnown RBP14.35□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Egfem1Q8C088 590 aa14.35□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Abca15E9PWH4 1668 aa14.35□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Chl1P70232 1209 aa14.34□□□□□ -0.11
Vamp1-202ENSMUST00000063588 MvpQ9EQK5 861 aa14.34□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Ppp1r3fQ9JIG4 799 aa14.34□□□□□ -0.11
Vamp1-202ENSMUST00000063588 FocadA2AKG8 1798 aa14.34□□□□□ -0.11
Vamp1-202ENSMUST00000063588 Ankrd44B2RXR6 993 aa14.33□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms