RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Slit3Q9WVB4 1523 aa11.7□□□□□ -0.54
Usp28-201ENSMUST00000047349 Cgnl1Q6AW69 1298 aa11.69□□□□□ -0.54
Usp28-201ENSMUST00000047349 Vamp4O70480 141 aa11.69□□□□□ -0.54
Usp28-201ENSMUST00000047349 Rangap1P46061 589 aaKnown RBP11.69□□□□□ -0.54
Usp28-201ENSMUST00000047349 Q3UPC7 1272 aa11.69□□□□□ -0.54
Usp28-201ENSMUST00000047349 Usp16Q99LG0 825 aa11.69□□□□□ -0.54
Usp28-201ENSMUST00000047349 Nsd3Q6P2L6 1439 aa11.68□□□□□ -0.54
Usp28-201ENSMUST00000047349 Dip2bQ3UH60 1574 aa11.68□□□□□ -0.54
Usp28-201ENSMUST00000047349 Ankrd44B2RXR6 993 aa11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Rims2Q9EQZ7 1530 aa11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Kif18aQ91WD7 886 aa11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 HnrnpmQ9D0E1 729 aaKnown RBP11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Cabp2Q9JLK4 216 aa11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Mfap1aC0HKD8 439 aaKnown RBP11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Mfap1bC0HKD9 439 aaKnown RBP11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Q3UJC8 639 aa11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Tnrc6bQ8BKI2 1810 aaKnown RBP11.67□□□□□ -0.54
Usp28-201ENSMUST00000047349 Ppp1r3fQ9JIG4 799 aa11.66□□□□□ -0.54
Usp28-201ENSMUST00000047349 U2surpQ6NV83 1029 aaKnown RBP11.66□□□□□ -0.54
Usp28-201ENSMUST00000047349 Rab11fip3Q8CHD8 1047 aa11.66□□□□□ -0.54
Usp28-201ENSMUST00000047349 Mdc1Q5PSV9 1707 aa11.66□□□□□ -0.54
Usp28-201ENSMUST00000047349 AU019823E9PUQ3 292 aa11.66□□□□□ -0.54
Usp28-201ENSMUST00000047349 Nectin2P32507 530 aa11.65□□□□□ -0.54
Usp28-201ENSMUST00000047349 Chd2E9PZM4 1827 aaKnown RBP11.65□□□□□ -0.54
Usp28-201ENSMUST00000047349 Brd1E9PZ26 1189 aaKnown RBP11.65□□□□□ -0.55
Usp28-201ENSMUST00000047349 Pik3c2bE9QAN8 1632 aa11.64□□□□□ -0.55
Usp28-201ENSMUST00000047349 CemipQ8BI06 1361 aa11.64□□□□□ -0.55
Usp28-201ENSMUST00000047349 LifrP42703 1092 aa11.64□□□□□ -0.55
Usp28-201ENSMUST00000047349 Tnpo1Q8BFY9 898 aaKnown RBP11.64□□□□□ -0.55
Usp28-201ENSMUST00000047349 Nutm1Q8BHP2 1126 aa11.64□□□□□ -0.55
Usp28-201ENSMUST00000047349 Rreb1Q3UH06 1700 aaKnown RBP11.64□□□□□ -0.55
Usp28-201ENSMUST00000047349 Eif4a2P10630 407 aa11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 Scaf1Q5U4C3 1256 aaKnown RBP11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 Ric3Q8BPM6 367 aa11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 ArxO35085 564 aa11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 Rtf1A2AQ19 715 aaKnown RBP11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 Rad17Q6NXW6 688 aa11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 Aldh1l2Q8K009 923 aa11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 Arap3Q8R5G7 1538 aa11.63□□□□□ -0.55
Usp28-201ENSMUST00000047349 Eif4g2Q62448 906 aaKnown RBP11.62□□□□□ -0.55
Usp28-201ENSMUST00000047349 Mcm2P97310 904 aa11.62□□□□□ -0.55
Usp28-201ENSMUST00000047349 Fgd1P52734 960 aa11.62□□□□□ -0.55
Usp28-201ENSMUST00000047349 Cdk12Q14AX6 1484 aaKnown RBP11.61□□□□□ -0.55
Usp28-201ENSMUST00000047349 MpripP97434 1024 aa11.61□□□□□ -0.55
Usp28-201ENSMUST00000047349 MarsQ68FL6 902 aaKnown RBP11.61□□□□□ -0.55
Usp28-201ENSMUST00000047349 Cog6Q8R3I3 657 aa11.61□□□□□ -0.55
Usp28-201ENSMUST00000047349 Mcm10Q0VBD2 885 aa11.61□□□□□ -0.55
Usp28-201ENSMUST00000047349 NgefQ8CHT1 710 aa11.61□□□□□ -0.55
Usp28-201ENSMUST00000047349 Gcc1Q9D4H2 778 aa11.61□□□□□ -0.55
Usp28-201ENSMUST00000047349 Ap3b2Q9JME5 1082 aa11.6□□□□□ -0.55
Usp28-201ENSMUST00000047349 Irx3P81067 507 aa11.6□□□□□ -0.55
Usp28-201ENSMUST00000047349 CarsQ9ER72 831 aaKnown RBP11.6□□□□□ -0.55
Usp28-201ENSMUST00000047349 N4bp2F8VQG7 1678 aaKnown RBP11.6□□□□□ -0.55
Usp28-201ENSMUST00000047349 TmpoQ61033 693 aaKnown RBP11.59□□□□□ -0.55
Usp28-201ENSMUST00000047349 Med1Q925J9 1575 aa11.59□□□□□ -0.55
Usp28-201ENSMUST00000047349 Plin1Q8CGN5 517 aa11.59□□□□□ -0.55
Usp28-201ENSMUST00000047349 4930407I10RikD3Z5T8 1512 aa11.59□□□□□ -0.55
Usp28-201ENSMUST00000047349 Dennd6aQ8BH65 605 aa11.59□□□□□ -0.55
Usp28-201ENSMUST00000047349 Lmtk3Q5XJV6 1424 aa11.58□□□□□ -0.55
Usp28-201ENSMUST00000047349 Wdr63B2RY71 923 aa11.58□□□□□ -0.55
Usp28-201ENSMUST00000047349 Aldh8a1Q8BH00 487 aa11.58□□□□□ -0.55
Usp28-201ENSMUST00000047349 Kif20bQ80WE4 1774 aaKnown RBP11.58□□□□□ -0.56
Usp28-201ENSMUST00000047349 Pnmal2G3X9N3 661 aa11.58□□□□□ -0.56
Usp28-201ENSMUST00000047349 Trim27Q62158 513 aa11.58□□□□□ -0.56
Usp28-201ENSMUST00000047349 4933402E13RikQ9D4D2 429 aa11.58□□□□□ -0.56
Usp28-201ENSMUST00000047349 Pdlim2Q8R1G6 349 aa11.57□□□□□ -0.56
Usp28-201ENSMUST00000047349 IghaA0A0A6YXW6 389 aa11.57□□□□□ -0.56
Usp28-201ENSMUST00000047349 Cabp4Q8VHC5 271 aa11.57□□□□□ -0.56
Usp28-201ENSMUST00000047349 Chd4Q6PDQ2 1915 aaKnown RBP11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Ncapd2Q8K2Z4 1392 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Gm10093D3YYI8 482 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Hdac1O09106 482 aaKnown RBP11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Ecm2Q5FW85 670 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Adamtsl3G3UXC7 1706 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 1700019A02RikA0A087WPV9 146 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 NalcnQ8BXR5 1738 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Abcc10Q8R4P9 1501 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Chl1P70232 1209 aa11.56□□□□□ -0.56
Usp28-201ENSMUST00000047349 Gm21190A0A0G2JGJ6 266 aa11.55□□□□□ -0.56
Usp28-201ENSMUST00000047349 Hoxa7P02830 229 aa11.55□□□□□ -0.56
Usp28-201ENSMUST00000047349 ScaperF8VQ70 1398 aaKnown RBP11.55□□□□□ -0.56
Usp28-201ENSMUST00000047349 Slit2Q9R1B9 1521 aa11.55□□□□□ -0.56
Usp28-201ENSMUST00000047349 Anapc15-psA0A140T8L6 141 aa11.55□□□□□ -0.56
Usp28-201ENSMUST00000047349 Mon2Q80TL7 1715 aa11.55□□□□□ -0.56
Usp28-201ENSMUST00000047349 Triml2E9PW10 424 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Tm6sf1P58749 370 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Sox12Q04890 314 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Col16a1Q8BLX7 1580 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Frmpd2A0A140LI67 1392 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Kif24Q6NWW5 1356 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Gsdma3Q5Y4Y6 464 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Klhdc4Q921I2 584 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Terf2O35144 541 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Rsph3aQ3UFY4 516 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Sv2bQ8BG39 683 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 GphnQ8BUV3 769 aaKnown RBP11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 HypkQ9CR41 129 aa11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Senp3Q9EP97 568 aaKnown RBP11.54□□□□□ -0.56
Usp28-201ENSMUST00000047349 Ptpn23Q6PB44 1692 aa11.53□□□□□ -0.56
Usp28-201ENSMUST00000047349 Plppr3Q7TPB0 716 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 85 ms