RNA–Protein interactions for RNA: ENSMUST00000034880.9

Stra6-201, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-201ENSMUST00000034880 Lrrc7Q80TE7 1490 aa12.54□□□□□ -0.4
Stra6-201ENSMUST00000034880 Gzf1Q4VBD9 706 aa12.54□□□□□ -0.4
Stra6-201ENSMUST00000034880 Pnma3Q8JZW8 466 aa12.54□□□□□ -0.4
Stra6-201ENSMUST00000034880 Vamp4O70480 141 aa12.54□□□□□ -0.4
Stra6-201ENSMUST00000034880 Ppip5k2Q6ZQB6 1129 aa12.54□□□□□ -0.4
Stra6-201ENSMUST00000034880 4931400O07RikQ9D4M5 137 aa12.54□□□□□ -0.4
Stra6-201ENSMUST00000034880 PalmQ9Z0P4 383 aa12.54□□□□□ -0.4
Stra6-201ENSMUST00000034880 PtprtQ99M80 1454 aa12.53□□□□□ -0.4
Stra6-201ENSMUST00000034880 Rnf214Q8BFU3 668 aaKnown RBP12.53□□□□□ -0.4
Stra6-201ENSMUST00000034880 Cdc37l1Q9CZP7 335 aa12.53□□□□□ -0.4
Stra6-201ENSMUST00000034880 Swt1Q9DBQ9 907 aa12.53□□□□□ -0.4
Stra6-201ENSMUST00000034880 Gdpd2Q9ESM6 539 aa12.53□□□□□ -0.4
Stra6-201ENSMUST00000034880 Adgrb3Q80ZF8 1522 aa12.53□□□□□ -0.4
Stra6-201ENSMUST00000034880 FanclQ9CR14 375 aa12.53□□□□□ -0.4
Stra6-201ENSMUST00000034880 Ino80Q6ZPV2 1559 aa12.52□□□□□ -0.4
Stra6-201ENSMUST00000034880 Zdhhc9P59268 364 aa12.52□□□□□ -0.4
Stra6-201ENSMUST00000034880 Zkscan1Q8BGS3 561 aaKnown RBP12.52□□□□□ -0.4
Stra6-201ENSMUST00000034880 Med14A2ABV5 1459 aaKnown RBP12.52□□□□□ -0.4
Stra6-201ENSMUST00000034880 Skint5A7XUY5 1461 aa12.52□□□□□ -0.4
Stra6-201ENSMUST00000034880 Ehbp1l1Q99MS7 1716 aa12.52□□□□□ -0.41
Stra6-201ENSMUST00000034880 Syce3B5KM66 88 aa12.52□□□□□ -0.41
Stra6-201ENSMUST00000034880 ImpactO55091 318 aa12.52□□□□□ -0.41
Stra6-201ENSMUST00000034880 Chmp4cQ9D7F7 232 aa12.52□□□□□ -0.41
Stra6-201ENSMUST00000034880 Nom1Q3UFM5 854 aaKnown RBP12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 Fez1Q8K0X8 392 aa12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 Smarca5Q91ZW3 1051 aaKnown RBP12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 Znf518aB2RRF6 1478 aaKnown RBP12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 MaddQ80U28 1577 aa12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 Gadd45bP22339 160 aa12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 Mdc1Q5PSV9 1707 aa12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 Becn1O88597 448 aa12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 Ppp6r3Q922D4 844 aa12.51□□□□□ -0.41
Stra6-201ENSMUST00000034880 CenppQ9CZ92 286 aa12.5□□□□□ -0.41
Stra6-201ENSMUST00000034880 Uhrf1bp1B2KF50 1429 aa12.5□□□□□ -0.41
Stra6-201ENSMUST00000034880 Prex1Q69ZK0 1650 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Zscan25B2RX31 543 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Triml2E9PW10 424 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Eif4g2Q62448 906 aaKnown RBP12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Nrxn1Q9CS84 1514 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Pdia3P27773 505 aaKnown RBP12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 CalcaP70160 136 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Pdcl2Q78Y63 240 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Gys2Q8VCB3 704 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Ciz1Q8VEH2 845 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 Cyp27a1Q9DBG1 533 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 PaskQ8CEE6 1383 aa12.49□□□□□ -0.41
Stra6-201ENSMUST00000034880 U2surpQ6NV83 1029 aaKnown RBP12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 Atp1b4Q99ME6 356 aa12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 Dhx30Q99PU8 1217 aaKnown RBP12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 Rcan3Q9JKK0 239 aa12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 NinlQ6ZQ12 1394 aa12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 Eif2ak4Q9QZ05 1648 aa12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 E4f1Q8CCE9 783 aa12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 Plxnc1Q9QZC2 1574 aa12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 Nucb1Q02819 459 aaKnown RBP12.48□□□□□ -0.41
Stra6-201ENSMUST00000034880 Cul9Q80TT8 1865 aa12.47□□□□□ -0.41
Stra6-201ENSMUST00000034880 Klhdc4Q921I2 584 aa12.47□□□□□ -0.41
Stra6-201ENSMUST00000034880 OvosQ3UU35 1456 aa12.47□□□□□ -0.41
Stra6-201ENSMUST00000034880 Plin1Q8CGN5 517 aa12.47□□□□□ -0.41
Stra6-201ENSMUST00000034880 Anapc15-psA0A140T8L6 141 aa12.46□□□□□ -0.41
Stra6-201ENSMUST00000034880 Mcm10Q0VBD2 885 aa12.46□□□□□ -0.41
Stra6-201ENSMUST00000034880 Aifm3Q3TY86 605 aa12.46□□□□□ -0.42
Stra6-201ENSMUST00000034880 Usp16Q99LG0 825 aa12.46□□□□□ -0.42
Stra6-201ENSMUST00000034880 Ric3Q8BPM6 367 aa12.45□□□□□ -0.42
Stra6-201ENSMUST00000034880 Cgnl1Q6AW69 1298 aa12.45□□□□□ -0.42
Stra6-201ENSMUST00000034880 Ptch1Q61115 1434 aa12.45□□□□□ -0.42
Stra6-201ENSMUST00000034880 Birc3O08863 600 aa12.45□□□□□ -0.42
Stra6-201ENSMUST00000034880 Mindy4Q3UQI9 744 aa12.45□□□□□ -0.42
Stra6-201ENSMUST00000034880 Aldh8a1Q8BH00 487 aa12.45□□□□□ -0.42
Stra6-201ENSMUST00000034880 Fam13aQ8BGI4 693 aa12.44□□□□□ -0.42
Stra6-201ENSMUST00000034880 ScaperF8VQ70 1398 aaKnown RBP12.44□□□□□ -0.42
Stra6-201ENSMUST00000034880 Cdc42bpgQ80UW5 1551 aa12.44□□□□□ -0.42
Stra6-201ENSMUST00000034880 Cpa2Q504N0 417 aa12.44□□□□□ -0.42
Stra6-201ENSMUST00000034880 Chd1lQ9CXF7 900 aa12.44□□□□□ -0.42
Stra6-201ENSMUST00000034880 Q9D2X8 372 aa12.44□□□□□ -0.42
Stra6-201ENSMUST00000034880 Atp7bQ64446 1462 aa12.44□□□□□ -0.42
Stra6-201ENSMUST00000034880 Ift172Q6VH22 1749 aa12.43□□□□□ -0.42
Stra6-201ENSMUST00000034880 Zkscan16A2ALW2 728 aa12.43□□□□□ -0.42
Stra6-201ENSMUST00000034880 Chmp4bQ9D8B3 224 aaKnown RBP12.43□□□□□ -0.42
Stra6-201ENSMUST00000034880 Cabp2Q9JLK4 216 aa12.43□□□□□ -0.42
Stra6-201ENSMUST00000034880 Gnai1B2RSH2 354 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Fchsd2Q3USJ8 740 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Gcc1Q9D4H2 778 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Gnai3Q9DC51 354 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 1700019A02RikA0A087WPV9 146 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Kdm4aQ8BW72 1064 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Gripap1Q8VD04 806 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Gli2Q0VGT2 1544 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Lekr1B2RVN1 116 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Slc52a2Q9D8F3 450 aa12.42□□□□□ -0.42
Stra6-201ENSMUST00000034880 Shq1Q7TMX5 569 aa12.41□□□□□ -0.42
Stra6-201ENSMUST00000034880 HnrnpuQ8VEK3 800 aaKnown RBP12.41□□□□□ -0.42
Stra6-201ENSMUST00000034880 Elp1Q7TT37 1333 aaKnown RBP12.41□□□□□ -0.42
Stra6-201ENSMUST00000034880 Ythdc1E9Q5K9 736 aaKnown RBP12.41□□□□□ -0.42
Stra6-201ENSMUST00000034880 Prune1Q8BIW1 454 aa12.41□□□□□ -0.42
Stra6-201ENSMUST00000034880 Kif24Q6NWW5 1356 aa12.41□□□□□ -0.42
Stra6-201ENSMUST00000034880 Prdm2A2A7B5 1709 aaKnown RBP12.4□□□□□ -0.42
Stra6-201ENSMUST00000034880 Gsto1O09131 240 aa12.4□□□□□ -0.42
Stra6-201ENSMUST00000034880 Kif4P33174 1231 aa12.4□□□□□ -0.42
Stra6-201ENSMUST00000034880 Trim28Q62318 834 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms