RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Mcm2P97310 904 aa16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 SfswapQ3USH5 945 aaKnown RBP16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Trim34aQ99PP6 485 aa16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 CastP51125 788 aa16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Prkrip1Q9CWV6 186 aaKnown RBP16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Igf2bp2Q5SF07 592 aaKnown RBP16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 1700010I14RikQ7TPG0 532 aa16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Rrs1Q9CYH6 365 aaKnown RBP16.91■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Cavin4A2AMM0 362 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Psmd1Q3TXS7 953 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Cdk19Q8BWD8 501 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Tax1bp1Q3UKC1 814 aaKnown RBP16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Rapgef4Q9EQZ6 1011 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Jph4Q80WT0 628 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Arhgef18Q6P9R4 1021 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Mrvi1Q9WUX5 899 aaKnown RBP16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Tnni2P13412 182 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Homer1Q9Z2Y3 366 aa16.9■□□□□ 0.3
Col4a1-201ENSMUST00000033898 Dmrt2Q8BG36 561 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Map3k5O35099 1380 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Btbd11Q6GQW0 1109 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Zkscan1Q8BGS3 561 aaKnown RBP16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Znf131Q8K3J5 619 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Pde1cQ64338 706 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Vps37dQ810I0 261 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 ApobrQ8VBT6 942 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Krt85Q9Z2T6 507 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Ncoa2Q61026 1462 aa16.89■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Rnf187Q8BFX1 236 aa16.88■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Pip4k2aO70172 405 aa16.88■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Cyp26c1B2RXA7 518 aa16.88■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Ltv1Q6NSQ7 470 aaKnown RBP16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Ankib1Q6ZPS6 1085 aa16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Rnf216P58283 853 aa16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Luc7lQ9CYI4 371 aaKnown RBP16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Fam13aQ8BGI4 693 aa16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 TxlnbQ8VBT1 685 aa16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 NgdnQ9DB96 315 aaKnown RBP16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Hs1bp3Q3TC93 395 aa16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Trim25Q61510 634 aaKnown RBP16.87■□□□□ 0.29
Col4a1-201ENSMUST00000033898 AampJ3QN89 436 aa16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Q4VA45 678 aa16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Cdc45Q9Z1X9 566 aa16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 IncenpQ9WU62 880 aa16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Nup88Q8CEC0 753 aaKnown RBP16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Ces1hD3Z298 562 aa16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Ift57Q8BXG3 429 aa16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Rai14Q9EP71 979 aaKnown RBP16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 PalmQ9Z0P4 383 aa16.86■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Ncbp1Q3UYV9 790 aaKnown RBP16.85■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Cdc37l1Q9CZP7 335 aa16.85■□□□□ 0.29
Col4a1-201ENSMUST00000033898 PsapQ61207 557 aaKnown RBP16.85■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Dydc1Q9D9T0 175 aa16.85■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Dhx29Q6PGC1 1365 aaKnown RBP16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Kif18aQ91WD7 886 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Q9D5Q8 446 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Ccdc39Q9D5Y1 937 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Zfp444Q3TDV8 331 aaKnown RBP16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Adck5Q80V03 582 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Flad1Q8R123 492 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Nsd2Q8BVE8 1365 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Arhgap5P97393 1501 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Krt84Q99M73 603 aa16.84■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Plekhd1B2RPU2 505 aa16.83■□□□□ 0.29
Col4a1-201ENSMUST00000033898 Phldb1Q6PDH0 1371 aaKnown RBP16.83■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Smarca5Q91ZW3 1051 aaKnown RBP16.83■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Frat2Q8K025 231 aa16.83■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Rufy2Q8R4C2 606 aa16.83■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Dusp27Q148W8 1138 aa16.83■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cecr2E9Q2Z1 1453 aa16.83■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Slu7Q8BHJ9 585 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Tfip11Q9ERA6 838 aaKnown RBP16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Washc2Q6PGL7 1334 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Gsdma2Q32M21 443 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Brf1Q8CFK2 676 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Irgm2A0A140LIF8 407 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Fbf1A2A870 1173 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Afap1Q80YS6 731 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Nat10Q8K224 1024 aaKnown RBP16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Matr3Q8K310 846 aaKnown RBP16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 CenpqQ9CPQ5 267 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 GlmnQ8BZM1 596 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Acsbg1Q99PU5 721 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Fkbp5Q64378 456 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Phldb2Q8K1N2 1249 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Gps2Q921N8 327 aa16.82■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Tex19.1Q99MV2 351 aa16.81■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Zbtb22Q9Z0G7 638 aa16.81■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Gcc1Q9D4H2 778 aa16.81■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Nfxl1E9Q8I7 918 aaKnown RBP16.81■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Gas2l3Q3UWW6 683 aa16.81■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Znf428Q8C1M2 176 aa16.81■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Top1mtQ8R4U6 593 aa16.81■□□□□ 0.28
Col4a1-201ENSMUST00000033898 LrpprcQ6PB66 1392 aaKnown RBP16.8■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Rab3gap2Q8BMG7 1366 aa16.8■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cdkl5Q3UTQ8 938 aa16.8■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Pmfbp1Q9WVQ0 1022 aa16.8■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Ptpdc1Q6NZK8 747 aa16.8■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Cc2d1bQ8BRN9 848 aa16.8■□□□□ 0.28
Col4a1-201ENSMUST00000033898 Tbc1d7Q9D0K0 293 aa16.8■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms