RNA–Protein interactions for RNA: ENSMUST00000028062.7

Vim-201, Transcript of Vimentin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Vim, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-201ENSMUST00000028062 Cabp2Q9JLK4 216 aa20.73■□□□□ 0.91
Vim-201ENSMUST00000028062 Cdk12Q14AX6 1484 aaKnown RBP20.73■□□□□ 0.91
Vim-201ENSMUST00000028062 Mon2Q80TL7 1715 aa20.72■□□□□ 0.91
Vim-201ENSMUST00000028062 KarsQ99MN1 595 aaKnown RBP20.72■□□□□ 0.91
Vim-201ENSMUST00000028062 Abcc10Q8R4P9 1501 aa20.72■□□□□ 0.91
Vim-201ENSMUST00000028062 Mcm10Q0VBD2 885 aa20.72■□□□□ 0.91
Vim-201ENSMUST00000028062 Znf330Q922H9 316 aa20.72■□□□□ 0.91
Vim-201ENSMUST00000028062 Chmp4bQ9D8B3 224 aaKnown RBP20.72■□□□□ 0.91
Vim-201ENSMUST00000028062 AU019823E9PUQ3 292 aa20.71■□□□□ 0.91
Vim-201ENSMUST00000028062 Ppp1r9bQ6R891 817 aaKnown RBP20.71■□□□□ 0.91
Vim-201ENSMUST00000028062 Cluap1Q8R3P7 413 aa20.71■□□□□ 0.91
Vim-201ENSMUST00000028062 Eif2s2Q99L45 331 aaKnown RBP20.71■□□□□ 0.91
Vim-201ENSMUST00000028062 Stk31Q99MW1 1018 aa20.7■□□□□ 0.91
Vim-201ENSMUST00000028062 Zfp777B9EKF4 885 aa20.7■□□□□ 0.9
Vim-201ENSMUST00000028062 MvpQ9EQK5 861 aa20.7■□□□□ 0.9
Vim-201ENSMUST00000028062 Kif20bQ80WE4 1774 aaKnown RBP20.7■□□□□ 0.9
Vim-201ENSMUST00000028062 C5P06684 1680 aa20.7■□□□□ 0.9
Vim-201ENSMUST00000028062 Pik3c2aQ61194 1686 aa20.7■□□□□ 0.9
Vim-201ENSMUST00000028062 Als2Q920R0 1651 aa20.7■□□□□ 0.9
Vim-201ENSMUST00000028062 Tmco5bQ80X59 307 aa20.69■□□□□ 0.9
Vim-201ENSMUST00000028062 Ubr1O70481 1757 aa20.69■□□□□ 0.9
Vim-201ENSMUST00000028062 Col16a1Q8BLX7 1580 aa20.69■□□□□ 0.9
Vim-201ENSMUST00000028062 Map7O88735 730 aa20.68■□□□□ 0.9
Vim-201ENSMUST00000028062 Usp16Q99LG0 825 aa20.68■□□□□ 0.9
Vim-201ENSMUST00000028062 Ankrd44B2RXR6 993 aa20.68■□□□□ 0.9
Vim-201ENSMUST00000028062 Tbc1d32Q3URV1 1296 aa20.68■□□□□ 0.9
Vim-201ENSMUST00000028062 Nectin2P32507 530 aa20.67■□□□□ 0.9
Vim-201ENSMUST00000028062 SkilQ60665 675 aa20.67■□□□□ 0.9
Vim-201ENSMUST00000028062 Bcl9Q9D219 1425 aa20.67■□□□□ 0.9
Vim-201ENSMUST00000028062 Slit2Q9R1B9 1521 aa20.66■□□□□ 0.9
Vim-201ENSMUST00000028062 Hsp90aa1P07901 733 aaKnown RBP20.66■□□□□ 0.9
Vim-201ENSMUST00000028062 Wwc1Q5SXA9 1104 aa20.66■□□□□ 0.9
Vim-201ENSMUST00000028062 MarsQ68FL6 902 aaKnown RBP20.65■□□□□ 0.9
Vim-201ENSMUST00000028062 Scn7aB1AYL1 1681 aa20.65■□□□□ 0.9
Vim-201ENSMUST00000028062 MpripP97434 1024 aa20.65■□□□□ 0.9
Vim-201ENSMUST00000028062 Nutm1Q8BHP2 1126 aa20.65■□□□□ 0.9
Vim-201ENSMUST00000028062 Pnmal2G3X9N3 661 aa20.64■□□□□ 0.89
Vim-201ENSMUST00000028062 Ecm2Q5FW85 670 aa20.64■□□□□ 0.89
Vim-201ENSMUST00000028062 Map2P20357 1828 aa20.64■□□□□ 0.89
Vim-201ENSMUST00000028062 Rangap1P46061 589 aaKnown RBP20.63■□□□□ 0.89
Vim-201ENSMUST00000028062 Ccdc9Q8VC31 543 aaKnown RBP20.62■□□□□ 0.89
Vim-201ENSMUST00000028062 Brd1E9PZ26 1189 aaKnown RBP20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 Idi1P58044 227 aa20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 Rad17Q6NXW6 688 aa20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 Camta1A2A891 1682 aa20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 Tet3Q8BG87 1668 aa20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 Rabep1O35551 862 aa20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 U2surpQ6NV83 1029 aaKnown RBP20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 Kif18aQ91WD7 886 aa20.61■□□□□ 0.89
Vim-201ENSMUST00000028062 Adgrb1Q3UHD1 1582 aa20.6■□□□□ 0.89
Vim-201ENSMUST00000028062 4930407I10RikD3Z5T8 1512 aa20.6■□□□□ 0.89
Vim-201ENSMUST00000028062 Scaf1Q5U4C3 1256 aaKnown RBP20.6■□□□□ 0.89
Vim-201ENSMUST00000028062 Plppr3Q7TPB0 716 aa20.6■□□□□ 0.89
Vim-201ENSMUST00000028062 NgefQ8CHT1 710 aa20.6■□□□□ 0.89
Vim-201ENSMUST00000028062 Ptpn23Q6PB44 1692 aa20.59■□□□□ 0.89
Vim-201ENSMUST00000028062 Sptbn5F6UCX4 1208 aa20.59■□□□□ 0.89
Vim-201ENSMUST00000028062 TmpoQ61033 693 aaKnown RBP20.59■□□□□ 0.89
Vim-201ENSMUST00000028062 Dennd6aQ8BH65 605 aa20.59■□□□□ 0.89
Vim-201ENSMUST00000028062 Plin1Q8CGN5 517 aa20.58■□□□□ 0.89
Vim-201ENSMUST00000028062 Cetn4Q8K4K1 168 aa20.58■□□□□ 0.89
Vim-201ENSMUST00000028062 Klhdc4Q921I2 584 aa20.58■□□□□ 0.89
Vim-201ENSMUST00000028062 Nlgn1Q99K10 843 aa20.58■□□□□ 0.88
Vim-201ENSMUST00000028062 LifrP42703 1092 aa20.57■□□□□ 0.88
Vim-201ENSMUST00000028062 GphnQ8BUV3 769 aaKnown RBP20.57■□□□□ 0.88
Vim-201ENSMUST00000028062 Aldh1l2Q8K009 923 aa20.57■□□□□ 0.88
Vim-201ENSMUST00000028062 KnstrnQ9D9Z1 312 aaKnown RBP20.57■□□□□ 0.88
Vim-201ENSMUST00000028062 FancaQ9JL70 1439 aa20.57■□□□□ 0.88
Vim-201ENSMUST00000028062 Gm10563F6WIE4 79 aa20.56■□□□□ 0.88
Vim-201ENSMUST00000028062 Chl1P70232 1209 aa20.56■□□□□ 0.88
Vim-201ENSMUST00000028062 Trpm3Q5F4S9 1721 aa20.56■□□□□ 0.88
Vim-201ENSMUST00000028062 Parp14Q2EMV9 1817 aa20.55■□□□□ 0.88
Vim-201ENSMUST00000028062 Frmpd2A0A140LI67 1392 aa20.55■□□□□ 0.88
Vim-201ENSMUST00000028062 Ric3Q8BPM6 367 aa20.55■□□□□ 0.88
Vim-201ENSMUST00000028062 Ap3b2Q9JME5 1082 aa20.55■□□□□ 0.88
Vim-201ENSMUST00000028062 Kif24Q6NWW5 1356 aa20.55■□□□□ 0.88
Vim-201ENSMUST00000028062 PtprvP70289 1705 aa20.54■□□□□ 0.88
Vim-201ENSMUST00000028062 Sox12Q04890 314 aa20.53■□□□□ 0.88
Vim-201ENSMUST00000028062 Senp3Q9EP97 568 aaKnown RBP20.52■□□□□ 0.88
Vim-201ENSMUST00000028062 Rab11fip3Q8CHD8 1047 aa20.52■□□□□ 0.88
Vim-201ENSMUST00000028062 Cog6Q8R3I3 657 aa20.52■□□□□ 0.88
Vim-201ENSMUST00000028062 Cabp4Q8VHC5 271 aa20.52■□□□□ 0.88
Vim-201ENSMUST00000028062 Eya1P97767 591 aa20.51■□□□□ 0.87
Vim-201ENSMUST00000028062 Trim27Q62158 513 aa20.51■□□□□ 0.87
Vim-201ENSMUST00000028062 HnrnpuQ8VEK3 800 aaKnown RBP20.51■□□□□ 0.87
Vim-201ENSMUST00000028062 Gm21190A0A0G2JGJ6 266 aa20.51■□□□□ 0.87
Vim-201ENSMUST00000028062 Mfap1aC0HKD8 439 aaKnown RBP20.51■□□□□ 0.87
Vim-201ENSMUST00000028062 Mfap1bC0HKD9 439 aaKnown RBP20.51■□□□□ 0.87
Vim-201ENSMUST00000028062 Tnpo1Q8BFY9 898 aaKnown RBP20.51■□□□□ 0.87
Vim-201ENSMUST00000028062 Cgnl1Q6AW69 1298 aa20.49■□□□□ 0.87
Vim-201ENSMUST00000028062 Ano8Q6PB70 1060 aa20.49■□□□□ 0.87
Vim-201ENSMUST00000028062 Bcl11aQ9QYE3 773 aa20.49■□□□□ 0.87
Vim-201ENSMUST00000028062 Rtf1A2AQ19 715 aaKnown RBP20.49■□□□□ 0.87
Vim-201ENSMUST00000028062 CarsQ9ER72 831 aaKnown RBP20.49■□□□□ 0.87
Vim-201ENSMUST00000028062 Igsf1Q7TQA1 1317 aa20.48■□□□□ 0.87
Vim-201ENSMUST00000028062 Tmem94Q7TSH8 1360 aa20.48■□□□□ 0.87
Vim-201ENSMUST00000028062 Nckap5lQ6GQX2 1323 aa20.48■□□□□ 0.87
Vim-201ENSMUST00000028062 Wdr63B2RY71 923 aa20.48■□□□□ 0.87
Vim-201ENSMUST00000028062 Aldh8a1Q8BH00 487 aa20.48■□□□□ 0.87
Vim-201ENSMUST00000028062 Phf23Q8BSN5 401 aa20.48■□□□□ 0.87
Vim-201ENSMUST00000028062 Tm6sf1P58749 370 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms