RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 MvpQ9EQK5 861 aa23.13■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Synj2Q9D2G5 1434 aa23.11■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 U2surpQ6NV83 1029 aaKnown RBP23.11■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Ankrd44B2RXR6 993 aa23.11■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Rsph6aQ8CDR2 708 aa23.1■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Usp16Q99LG0 825 aa23.1■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Ppp1r18Q8BQ30 594 aa23.08■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Rfx1P48377 963 aa23.08■■□□□ 1.29
Ccdc3-201ENSMUST00000027988 Tfip11Q9ERA6 838 aaKnown RBP23.07■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Wdr63B2RY71 923 aa23.07■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Gnai1B2RSH2 354 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Gnai3Q9DC51 354 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Aifm3Q3TY86 605 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Dmrtc1Q9D9R7 182 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Spef2Q8C9J3 1734 aa23.06■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Ddit3P35639 168 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Trim27Q62158 513 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Ssh1Q76I79 1042 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 GorabQ8BRM2 368 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Tbc1d9Q3UYK3 1264 aa23.05■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Chd4Q6PDQ2 1915 aaKnown RBP23.04■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Zc3h13E9Q784 1729 aaKnown RBP23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 LifrP42703 1092 aa23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 KnstrnQ9D9Z1 312 aaKnown RBP23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 CarsQ9ER72 831 aaKnown RBP23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Nek4Q9Z1J2 792 aa23.03■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 MpripP97434 1024 aa23.02■■□□□ 1.28
Ccdc3-201ENSMUST00000027988 Gm10093D3YYI8 482 aa23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Hdac1O09106 482 aaKnown RBP23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Idi2Q8BFZ6 227 aa23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Kif1aP33173 1695 aa23.01■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Psme1P97371 249 aa23■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 MarsQ68FL6 902 aaKnown RBP23■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Kif24Q6NWW5 1356 aa23■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Dip2aQ8BWT5 1523 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 1700019A02RikA0A087WPV9 146 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Eif4a2P10630 407 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Mcm4P49717 862 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Wwc1Q5SXA9 1104 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Txndc2Q6P902 515 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Amer1Q7TS75 1132 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Ric3Q8BPM6 367 aa22.99■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Ccdc146E9Q9F7 977 aa22.98■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 PtpruB1AUH1 1446 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Pibf1E9Q6K3 756 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 FanclQ9CR14 375 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 RictorQ6QI06 1708 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Pik3c2bE9QAN8 1632 aa22.97■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 NpatQ8BMA5 1420 aa22.96■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Triml2E9PW10 424 aa22.95■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Dnttip2Q8R2M2 758 aaKnown RBP22.95■■□□□ 1.27
Ccdc3-201ENSMUST00000027988 Il4rP16382 810 aa22.95■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Stk11ipQ3TAA7 1072 aa22.95■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Cetn4Q8K4K1 168 aa22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Ipo4Q8VI75 1082 aa22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Gemin5Q8BX17 1502 aaKnown RBP22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Smarca5Q91ZW3 1051 aaKnown RBP22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 HnrnpmQ9D0E1 729 aaKnown RBP22.94■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Plcb2A3KGF7 1181 aa22.93■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Kif20bQ80WE4 1774 aaKnown RBP22.93■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Dnajc5gQ8C632 165 aa22.92■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 4930407I10RikD3Z5T8 1512 aa22.91■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Snap23O09044 210 aa22.91■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 CatipB9EKE5 520 aa22.91■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Stk31Q99MW1 1018 aa22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Ggnbp2Q5SV77 696 aa22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Cavin2Q63918 418 aaKnown RBP22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 NgefQ8CHT1 710 aa22.9■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Kcnn1Q9EQR3 537 aa22.89■■□□□ 1.26
Ccdc3-201ENSMUST00000027988 Dip2bQ3UH60 1574 aa22.88■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Prim1P20664 417 aa22.88■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Fam13aQ8BGI4 693 aa22.88■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Sos1Q62245 1319 aa22.87■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Chl1P70232 1209 aa22.87■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Cps1Q8C196 1500 aa22.87■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Tet3Q8BG87 1668 aa22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 EngaseQ8BX80 734 aa22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Eif4g2Q62448 906 aaKnown RBP22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Tnrc6bQ8BKI2 1810 aaKnown RBP22.86■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Rsph4aQ8BYM7 716 aa22.85■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Adgrb1Q3UHD1 1582 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Aldh8a1Q8BH00 487 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Tm6sf1P58749 370 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Rab11fip3Q8CHD8 1047 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 CenppQ9CZ92 286 aa22.84■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Med1Q925J9 1575 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Prkar2bP31324 416 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 CalcaP70160 136 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Ppp6r3Q922D4 844 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Mdc1Q5PSV9 1707 aa22.83■■□□□ 1.25
Ccdc3-201ENSMUST00000027988 Ncapd2Q8K2Z4 1392 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Hoxb7P09024 217 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Rsph3aQ3UFY4 516 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 TmpoQ61033 693 aaKnown RBP22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Phf23Q8BSN5 401 aa22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Chmp4bQ9D8B3 224 aaKnown RBP22.83■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Kdm4cQ8VCD7 1054 aa22.82■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Cc2d1aQ8K1A6 943 aa22.81■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Fgd1P52734 960 aa22.81■■□□□ 1.24
Ccdc3-201ENSMUST00000027988 Parp14Q2EMV9 1817 aa22.8■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms