RNA–Protein interactions for RNA: snR58

snR58, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR58, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR58snR58 RPP1AP05318 106 aaPredicted RBP-0.56□□□□□ -2.5
snR58snR58 CLB5P30283 435 aa-0.56□□□□□ -2.5
snR58snR58 MAF1P41910 395 aa-0.56□□□□□ -2.5
snR58snR58 MCM6P53091 1017 aaKnown RBP-0.56□□□□□ -2.5
snR58snR58 IDI1P15496 288 aa-0.57□□□□□ -2.5
snR58snR58 UTR2P32623 467 aa-0.57□□□□□ -2.5
snR58snR58 DEF1P35732 738 aaKnown RBP-0.57□□□□□ -2.5
snR58snR58 PAN5P38787 379 aa-0.57□□□□□ -2.5
snR58snR58 RIX1P38883 763 aaPredicted RBP-0.57□□□□□ -2.5
snR58snR58 SUT2Q12286 268 aa-0.57□□□□□ -2.5
snR58snR58 MLF3P32047 452 aa-0.58□□□□□ -2.5
snR58snR58 PPZ2P33329 710 aa-0.58□□□□□ -2.5
snR58snR58 LST4P34239 828 aa-0.58□□□□□ -2.5
snR58snR58 NCL1P38205 684 aaKnown RBP-0.58□□□□□ -2.5
snR58snR58 PTC7P38797 343 aa-0.58□□□□□ -2.5
snR58snR58 PEX7P39108 375 aa-0.58□□□□□ -2.5
snR58snR58 KIP3P53086 805 aaKnown RBP-0.58□□□□□ -2.5
snR58snR58 SNO2P53823 222 aa-0.58□□□□□ -2.5
snR58snR58 MTH1P35198 433 aa-0.59□□□□□ -2.5
snR58snR58 YIL169CP40442 995 aa-0.59□□□□□ -2.5
snR58snR58 REF2P42073 533 aaPredicted RBP-0.59□□□□□ -2.5
snR58snR58 SCW10Q04951 389 aa-0.59□□□□□ -2.5
snR58snR58 YPQ2Q06328 317 aa-0.59□□□□□ -2.5
snR58snR58 TRE1Q08919 783 aa-0.59□□□□□ -2.5
snR58snR58 COX6P00427 148 aa-0.6□□□□□ -2.51
snR58snR58 PMA1P05030 918 aaKnown RBP-0.6□□□□□ -2.51
snR58snR58 SPT2P06843 333 aaPredicted RBP-0.6□□□□□ -2.51
snR58snR58 PSE1P32337 1089 aaKnown RBP-0.6□□□□□ -2.51
snR58snR58 MAE1P36013 669 aaKnown RBP-0.6□□□□□ -2.51
snR58snR58 GPT2P36148 743 aa-0.6□□□□□ -2.51
snR58snR58 GTS1P40956 396 aa-0.6□□□□□ -2.51
snR58snR58 GND2P53319 492 aa-0.6□□□□□ -2.51
snR58snR58 EAR1Q03212 550 aa-0.6□□□□□ -2.51
snR58snR58 NDD1Q08887 554 aa-0.6□□□□□ -2.51
snR58snR58 TEC1P18412 486 aa-0.61□□□□□ -2.51
snR58snR58 FAA2P39518 744 aa-0.61□□□□□ -2.51
snR58snR58 POL5P39985 1022 aaKnown RBP-0.61□□□□□ -2.51
snR58snR58 STB4P50104 949 aa-0.61□□□□□ -2.51
snR58snR58 CUS1Q02554 436 aaPredicted RBP-0.61□□□□□ -2.51
snR58snR58 GCN5Q03330 439 aa-0.61□□□□□ -2.51
snR58snR58 YMR196WQ04336 1088 aa-0.61□□□□□ -2.51
snR58snR58 MCH5Q08777 521 aa-0.61□□□□□ -2.51
snR58snR58 TUB1P09733 447 aaKnown RBP-0.62□□□□□ -2.51
snR58snR58 YJU3P28321 313 aa-0.62□□□□□ -2.51
snR58snR58 SPC42P36094 363 aa-0.62□□□□□ -2.51
snR58snR58 TBS1P38114 1094 aa-0.62□□□□□ -2.51
snR58snR58 MTO1P53070 669 aa-0.62□□□□□ -2.51
snR58snR58 YMR206WQ03695 313 aa-0.62□□□□□ -2.51
snR58snR58 ISR1Q06098 443 aaKnown RBP-0.62□□□□□ -2.51
snR58snR58 YOR059CQ08448 450 aaKnown RBP-0.62□□□□□ -2.51
snR58snR58 HAL5P38970 855 aaKnown RBP-0.63□□□□□ -2.51
snR58snR58 MEF2P39677 819 aa-0.63□□□□□ -2.51
snR58snR58 SLX8P40072 274 aa-0.63□□□□□ -2.51
snR58snR58 SIM1P40472 476 aa-0.63□□□□□ -2.51
snR58snR58 YJL181WP46987 611 aa-0.63□□□□□ -2.51
snR58snR58 SKP1P52286 194 aa-0.63□□□□□ -2.51
snR58snR58 NEW1Q08972 1196 aaKnown RBP-0.63□□□□□ -2.51
snR58snR58 ELG1Q12050 791 aa-0.63□□□□□ -2.51
snR58snR58 ESS1P22696 170 aa-0.64□□□□□ -2.51
snR58snR58 ATS1P31386 333 aa-0.64□□□□□ -2.51
snR58snR58 APM2P38700 605 aa-0.64□□□□□ -2.51
snR58snR58 YTA6P40328 754 aa-0.64□□□□□ -2.51
snR58snR58 TEA1P47988 759 aa-0.64□□□□□ -2.51
snR58snR58 STE11P23561 717 aa-0.65□□□□□ -2.51
snR58snR58 RSC30P38781 883 aa-0.65□□□□□ -2.51
snR58snR58 LAM1P38851 1228 aa-0.65□□□□□ -2.51
snR58snR58 URN1Q06525 465 aaKnown RBP-0.65□□□□□ -2.51
snR58snR58 MSL5Q12186 476 aaKnown RBP RIP-Chip data-0.65□□□□□ -2.51not detected
snR58snR58 YVC1Q12324 675 aa-0.65□□□□□ -2.51
snR58snR58 RPS4AP0CX35 261 aaKnown RBP-0.66□□□□□ -2.52
snR58snR58 RPS4BP0CX36 261 aaKnown RBP-0.66□□□□□ -2.52
snR58snR58 CDC20P26309 610 aa-0.66□□□□□ -2.52
snR58snR58 HRR25P29295 494 aaKnown RBP-0.66□□□□□ -2.52
snR58snR58 LEO1P38439 464 aa-0.66□□□□□ -2.52
snR58snR58 IGO1P53897 168 aa-0.66□□□□□ -2.52
snR58snR58 ROT1Q03691 256 aa-0.66□□□□□ -2.52
snR58snR58 RIM13Q03792 727 aa-0.66□□□□□ -2.52
snR58snR58 DUS4Q06063 367 aa-0.66□□□□□ -2.52
snR58snR58 Q0182Q9ZZW1 134 aa-0.66□□□□□ -2.52
snR58snR58 SEC23P15303 768 aaKnown RBP-0.67□□□□□ -2.52
snR58snR58 DCG1P32460 244 aa-0.67□□□□□ -2.52
snR58snR58 TFA2P36145 328 aa-0.67□□□□□ -2.52
snR58snR58 EXO84P38261 753 aa-0.67□□□□□ -2.52
snR58snR58 ENP2P48234 707 aaKnown RBP-0.67□□□□□ -2.52
snR58snR58 ITC1P53125 1264 aa-0.67□□□□□ -2.52
snR58snR58 YPL068CQ02749 293 aa-0.67□□□□□ -2.52
snR58snR58 SGD1Q06132 899 aa-0.67□□□□□ -2.52
snR58snR58 KIN1P13185 1064 aa-0.68□□□□□ -2.52
snR58snR58 TDP1P38319 544 aa-0.68□□□□□ -2.52
snR58snR58 YER156CP40093 338 aaKnown RBP-0.68□□□□□ -2.52
snR58snR58 BNA3P47039 444 aaKnown RBP-0.68□□□□□ -2.52
snR58snR58 HST2P53686 357 aa-0.68□□□□□ -2.52
snR58snR58 HPC2Q01448 625 aa-0.68□□□□□ -2.52
snR58snR58 PLB2Q03674 706 aa-0.68□□□□□ -2.52
snR58snR58 YTH1Q06102 208 aaPredicted RBP-0.68□□□□□ -2.52
snR58snR58 ARO10Q06408 635 aa-0.68□□□□□ -2.52
snR58snR58 MAK21Q12176 1025 aaKnown RBP-0.68□□□□□ -2.52
snR58snR58 PTP1P25044 335 aa-0.69□□□□□ -2.52
snR58snR58 PUF4P25339 888 aaKnown RBP RIP-Chip data-0.69□□□□□ -2.52not detected
snR58snR58 GUT2P32191 649 aa-0.69□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms