RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W SIS2P36024 562 aa10.84□□□□□ -0.67
BRR1YPR057W SLN1P39928 1220 aaPredicted RBP10.84□□□□□ -0.67
BRR1YPR057W CIR1P42940 261 aa10.84□□□□□ -0.67
BRR1YPR057W PEX14P53112 341 aa10.84□□□□□ -0.67
BRR1YPR057W RPS15Q01855 142 aaKnown RBP10.84□□□□□ -0.67
BRR1YPR057W PRP42Q03776 544 aaKnown RBP10.84□□□□□ -0.67
BRR1YPR057W EST2Q06163 884 aa10.84□□□□□ -0.67
BRR1YPR057W CPA2P03965 1118 aaKnown RBP10.83□□□□□ -0.68
BRR1YPR057W ICL1P28240 557 aaPredicted RBP10.83□□□□□ -0.68
BRR1YPR057W TIF4632P39936 914 aaKnown RBP10.83□□□□□ -0.68
BRR1YPR057W UFD2P54860 961 aa10.83□□□□□ -0.68
BRR1YPR057W YLR407WQ06070 228 aa10.83□□□□□ -0.68
BRR1YPR057W ARG82P07250 355 aa10.82□□□□□ -0.68
BRR1YPR057W KEX1P09620 729 aa10.82□□□□□ -0.68
BRR1YPR057W RTS1P38903 757 aa10.82□□□□□ -0.68
BRR1YPR057W YER156CP40093 338 aaKnown RBP10.82□□□□□ -0.68
BRR1YPR057W GSM1P42950 618 aa10.82□□□□□ -0.68
BRR1YPR057W ENT3P47160 408 aa10.82□□□□□ -0.68
BRR1YPR057W PIP2P52960 996 aa10.82□□□□□ -0.68
BRR1YPR057W PEX19Q07418 342 aa10.82□□□□□ -0.68
BRR1YPR057W GAS5Q08193 484 aa10.82□□□□□ -0.68
BRR1YPR057W APL6P46682 809 aa10.81□□□□□ -0.68
BRR1YPR057W UBP10P53874 792 aaPredicted RBP10.81□□□□□ -0.68
BRR1YPR057W DPL1Q05567 589 aa10.81□□□□□ -0.68
BRR1YPR057W AIM44Q99299 758 aa10.81□□□□□ -0.68
BRR1YPR057W FAS2P19097 1887 aaKnown RBP10.81□□□□□ -0.68
BRR1YPR057W MPH3P0CE00 602 aa10.8□□□□□ -0.68
BRR1YPR057W ELM1P32801 640 aa10.8□□□□□ -0.68
BRR1YPR057W YHL050CP38721 697 aa10.8□□□□□ -0.68
BRR1YPR057W BUD6P41697 788 aa10.8□□□□□ -0.68
BRR1YPR057W MRD1Q06106 887 aaKnown RBP10.8□□□□□ -0.68
BRR1YPR057W MBR1P23493 339 aa10.79□□□□□ -0.68
BRR1YPR057W KNS1P32350 737 aaPredicted RBP10.79□□□□□ -0.68
BRR1YPR057W ANP1P32629 500 aa10.79□□□□□ -0.68
BRR1YPR057W RSM25P40496 264 aa10.79□□□□□ -0.68
BRR1YPR057W PUS6P53294 404 aa10.79□□□□□ -0.68
BRR1YPR057W RRG1Q12167 365 aaPredicted RBP10.79□□□□□ -0.68
BRR1YPR057W PFK2P16862 959 aaKnown RBP RIP-Chip data10.78□□□□□ -0.68not detected
BRR1YPR057W MYO3P36006 1272 aa10.78□□□□□ -0.68
BRR1YPR057W MAL33P38157 468 aa10.78□□□□□ -0.68
BRR1YPR057W RVS167P39743 482 aaKnown RBP10.78□□□□□ -0.68
BRR1YPR057W EPL1P43572 832 aa10.78□□□□□ -0.68
BRR1YPR057W NSG2P53898 299 aa10.78□□□□□ -0.68
BRR1YPR057W HDA1P53973 706 aa10.78□□□□□ -0.68
BRR1YPR057W TFC6Q06339 672 aa10.78□□□□□ -0.68
BRR1YPR057W ACK1Q07622 623 aaPredicted RBP10.78□□□□□ -0.68
BRR1YPR057W YPL260WQ08977 551 aa10.78□□□□□ -0.68
BRR1YPR057W RPS9BP05755 195 aaKnown RBP10.77□□□□□ -0.69
BRR1YPR057W RDS1P25611 832 aa10.77□□□□□ -0.69
BRR1YPR057W RPS7AP26786 190 aaKnown RBP10.77□□□□□ -0.69
BRR1YPR057W RPN12P32496 274 aa10.77□□□□□ -0.69
BRR1YPR057W RFC5P38251 354 aa10.77□□□□□ -0.69
BRR1YPR057W PTK2P47116 818 aaKnown RBP10.77□□□□□ -0.69
BRR1YPR057W KRE33P53914 1056 aaKnown RBP10.77□□□□□ -0.69
BRR1YPR057W APC11Q12157 165 aa10.77□□□□□ -0.69
BRR1YPR057W DIP2Q12220 943 aaPredicted RBP10.77□□□□□ -0.69
BRR1YPR057W RAD61Q99359 647 aa10.77□□□□□ -0.69
BRR1YPR057W SHC1P39000 512 aa10.76□□□□□ -0.69
BRR1YPR057W AKR1P39010 764 aa10.76□□□□□ -0.69
BRR1YPR057W CCT5P40413 562 aaKnown RBP10.76□□□□□ -0.69
BRR1YPR057W ISW2Q08773 1120 aa10.76□□□□□ -0.69
BRR1YPR057W FLO1P32768 1537 aa10.75□□□□□ -0.69
BRR1YPR057W CBP3P21560 335 aa10.75□□□□□ -0.69
BRR1YPR057W DIT2P21595 489 aa10.75□□□□□ -0.69
BRR1YPR057W VID27P40157 782 aa10.75□□□□□ -0.69
BRR1YPR057W TOP1P04786 769 aa10.74□□□□□ -0.69
BRR1YPR057W PGI1P12709 554 aaKnown RBP10.74□□□□□ -0.69
BRR1YPR057W FRS2P15625 503 aaKnown RBP10.74□□□□□ -0.69
BRR1YPR057W AFG2P32794 780 aa10.74□□□□□ -0.69
BRR1YPR057W BMH2P34730 273 aaKnown RBP10.74□□□□□ -0.69
BRR1YPR057W RPN10P38886 268 aaKnown RBP10.74□□□□□ -0.69
BRR1YPR057W ETT1Q08421 412 aaKnown RBP10.74□□□□□ -0.69
BRR1YPR057W FLO11P08640 1367 aa10.74□□□□□ -0.69
BRR1YPR057W HKR1P41809 1802 aa10.73□□□□□ -0.69
BRR1YPR057W HCA4P20448 770 aaKnown RBP10.73□□□□□ -0.69
BRR1YPR057W MAK31P23059 88 aa10.73□□□□□ -0.69
BRR1YPR057W RIT1P23796 513 aa10.73□□□□□ -0.69
BRR1YPR057W SWI4P25302 1093 aaKnown RBP10.73□□□□□ -0.69
BRR1YPR057W MAL31P38156 614 aa10.73□□□□□ -0.69
BRR1YPR057W MSH4P40965 878 aaPredicted RBP10.73□□□□□ -0.69
BRR1YPR057W ALG2P43636 503 aa10.73□□□□□ -0.69
BRR1YPR057W KEL3Q08979 651 aaPredicted RBP10.73□□□□□ -0.69
BRR1YPR057W HSP82P02829 709 aaKnown RBP10.72□□□□□ -0.69
BRR1YPR057W DID4P36108 232 aa10.72□□□□□ -0.69
BRR1YPR057W RSC1P53236 928 aa10.72□□□□□ -0.69
BRR1YPR057W PIL1P53252 339 aaKnown RBP10.72□□□□□ -0.69
BRR1YPR057W MYO5Q04439 1219 aaKnown RBP10.72□□□□□ -0.69
BRR1YPR057W DDP1Q99321 188 aaKnown RBP10.72□□□□□ -0.69
BRR1YPR057W PRO3P32263 286 aaKnown RBP10.71□□□□□ -0.69
BRR1YPR057W RKM3P38222 552 aa10.71□□□□□ -0.69
BRR1YPR057W CSM2P40465 213 aa10.71□□□□□ -0.69
BRR1YPR057W YJL171CP46992 396 aa10.71□□□□□ -0.69
BRR1YPR057W LCD1Q04377 747 aa10.71□□□□□ -0.69
BRR1YPR057W CRF1Q04930 467 aa10.71□□□□□ -0.69
BRR1YPR057W PCL8Q08966 492 aa10.71□□□□□ -0.69
BRR1YPR057W RNR3P21672 869 aaKnown RBP10.7□□□□□ -0.7
BRR1YPR057W YOR111WQ99210 232 aa10.7□□□□□ -0.7
BRR1YPR057W MSM1P22438 575 aa10.69□□□□□ -0.7
BRR1YPR057W RFT1P38206 574 aaPredicted RBP10.69□□□□□ -0.7
BRR1YPR057W VPS8P39702 1274 aa10.69□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms