RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C GCD7P32502 381 aaPredicted RBP8.86□□□□□ -0.99
UME1YPL139C YNG2P38806 282 aaKnown RBP8.86□□□□□ -0.99
UME1YPL139C SEN54Q02825 467 aaPredicted RBP8.86□□□□□ -0.99
UME1YPL139C GSC2P40989 1895 aa8.85□□□□□ -0.99
UME1YPL139C SNF3P10870 884 aa8.85□□□□□ -0.99
UME1YPL139C LEO1P38439 464 aa8.85□□□□□ -0.99
UME1YPL139C YFH7P43591 353 aa8.85□□□□□ -0.99
UME1YPL139C PML39Q03760 334 aa8.85□□□□□ -0.99
UME1YPL139C JJJ2P46997 583 aa8.84□□□□□ -0.99
UME1YPL139C INM2Q05533 292 aa8.84□□□□□ -0.99
UME1YPL139C TYW1Q08960 810 aaKnown RBP8.84□□□□□ -0.99
UME1YPL139C NUG1P40010 520 aaKnown RBP8.83□□□□□ -1
UME1YPL139C CSR2Q12734 1121 aa8.83□□□□□ -1
UME1YPL139C SUP35P05453 685 aaKnown RBP8.82□□□□□ -1
UME1YPL139C HVG1P0CE11 249 aa8.82□□□□□ -1
UME1YPL139C PTK1P36002 662 aaPredicted RBP8.82□□□□□ -1
UME1YPL139C YRB30P53107 440 aaPredicted RBP8.82□□□□□ -1
UME1YPL139C KEL1P38853 1164 aaKnown RBP8.81□□□□□ -1
UME1YPL139C ARH1P48360 493 aa8.81□□□□□ -1
UME1YPL139C ACK1Q07622 623 aaPredicted RBP8.81□□□□□ -1
UME1YPL139C POL32P47110 350 aa8.8□□□□□ -1
UME1YPL139C PUS6P53294 404 aa8.8□□□□□ -1
UME1YPL139C RAD2P07276 1031 aa8.79□□□□□ -1
UME1YPL139C PCS60P38137 543 aaKnown RBP RIP-Chip data8.79□□□□□ -1not detected
UME1YPL139C BDP1P46678 594 aa8.79□□□□□ -1
UME1YPL139C PUF6Q04373 656 aaKnown RBP8.79□□□□□ -1
UME1YPL139C GRX7P38068 203 aa8.78□□□□□ -1
UME1YPL139C SSF1P38789 453 aaPredicted RBP8.78□□□□□ -1
UME1YPL139C PEX29Q03370 554 aa8.78□□□□□ -1
UME1YPL139C RRI2Q12348 645 aa8.78□□□□□ -1
UME1YPL139C NIT1P40447 199 aa8.77□□□□□ -1.01
UME1YPL139C PSF3Q12146 194 aa8.77□□□□□ -1.01
UME1YPL139C PFK2P16862 959 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
UME1YPL139C MDL2P33311 773 aa8.76□□□□□ -1.01
UME1YPL139C APL6P46682 809 aa8.76□□□□□ -1.01
UME1YPL139C MOT2P34909 587 aaKnown RBP8.75□□□□□ -1.01
UME1YPL139C YGL242CP53066 181 aa8.75□□□□□ -1.01
UME1YPL139C ALO1P54783 526 aaKnown RBP8.75□□□□□ -1.01
UME1YPL139C TIF6Q12522 245 aaKnown RBP8.75□□□□□ -1.01
UME1YPL139C RAD53P22216 821 aa8.74□□□□□ -1.01
UME1YPL139C HGH1P48362 394 aaKnown RBP8.74□□□□□ -1.01
UME1YPL139C RRT6P53117 311 aaPredicted RBP8.74□□□□□ -1.01
UME1YPL139C PIB2P53191 635 aa8.74□□□□□ -1.01
UME1YPL139C PPM2Q08282 695 aa8.74□□□□□ -1.01
UME1YPL139C VPS13Q07878 3144 aa8.74□□□□□ -1.01
UME1YPL139C NOT3P06102 836 aaKnown RBP8.73□□□□□ -1.01
UME1YPL139C BSD2P38356 321 aa8.73□□□□□ -1.01
UME1YPL139C YMR147WP40218 223 aaKnown RBP8.73□□□□□ -1.01
UME1YPL139C CST9Q06032 482 aa8.73□□□□□ -1.01
UME1YPL139C TUB2P02557 457 aaKnown RBP8.73□□□□□ -1.01
UME1YPL139C PIF1P07271 859 aa8.73□□□□□ -1.01
UME1YPL139C ADP1P25371 1049 aa8.73□□□□□ -1.01
UME1YPL139C SPT23P35210 1082 aa8.73□□□□□ -1.01
UME1YPL139C NMD2P38798 1089 aaKnown RBP8.73□□□□□ -1.01
UME1YPL139C APE3P37302 537 aaKnown RBP8.72□□□□□ -1.01
UME1YPL139C BOI1P38041 980 aaKnown RBP8.72□□□□□ -1.01
UME1YPL139C SRF1Q12516 437 aa8.72□□□□□ -1.01
UME1YPL139C PMA1P05030 918 aaKnown RBP8.71□□□□□ -1.02
UME1YPL139C ECM21P38167 1117 aaKnown RBP8.71□□□□□ -1.02
UME1YPL139C GAL2P13181 574 aa8.7□□□□□ -1.02
UME1YPL139C RMD1Q03441 430 aa8.7□□□□□ -1.02
UME1YPL139C GIN4Q12263 1142 aa8.7□□□□□ -1.02
UME1YPL139C NCB2Q92317 146 aa8.7□□□□□ -1.02
UME1YPL139C PDR18P53756 1333 aa8.69□□□□□ -1.02
UME1YPL139C ASH1P34233 588 aa8.69□□□□□ -1.02
UME1YPL139C RBA50Q04418 439 aa8.69□□□□□ -1.02
UME1YPL139C KAR5Q04746 504 aa8.69□□□□□ -1.02
UME1YPL139C CYB2P00175 591 aa8.68□□□□□ -1.02
UME1YPL139C YDJ1P25491 409 aaKnown RBP8.68□□□□□ -1.02
UME1YPL139C YHL050CP38721 697 aa8.68□□□□□ -1.02
UME1YPL139C MRPS35P53292 345 aa8.68□□□□□ -1.02
UME1YPL139C LAM4P38800 1345 aa8.67□□□□□ -1.02
UME1YPL139C YBL028CP38202 106 aa8.67□□□□□ -1.02
UME1YPL139C TPS3P38426 1054 aaKnown RBP8.67□□□□□ -1.02
UME1YPL139C PIP2P52960 996 aa8.67□□□□□ -1.02
UME1YPL139C MLC1P53141 149 aa8.67□□□□□ -1.02
UME1YPL139C KIN1P13185 1064 aa8.66□□□□□ -1.02
UME1YPL139C IXR1P33417 597 aa8.66□□□□□ -1.02
UME1YPL139C ACA1P39970 489 aa8.66□□□□□ -1.02
UME1YPL139C NCS6P53088 359 aa8.66□□□□□ -1.02
UME1YPL139C PCL8Q08966 492 aa8.66□□□□□ -1.02
UME1YPL139C SDH2P21801 266 aa8.65□□□□□ -1.02
UME1YPL139C PKH3Q03306 898 aaPredicted RBP8.65□□□□□ -1.02
UME1YPL139C YDL124WQ07551 312 aaKnown RBP8.65□□□□□ -1.02
UME1YPL139C KEL3Q08979 651 aaPredicted RBP8.65□□□□□ -1.02
UME1YPL139C CHO2P05374 869 aaKnown RBP8.64□□□□□ -1.03
UME1YPL139C FBP1P09201 348 aa8.64□□□□□ -1.03
UME1YPL139C KRS1P15180 591 aaKnown RBP8.64□□□□□ -1.03
UME1YPL139C PAM1P37304 830 aaKnown RBP8.64□□□□□ -1.03
UME1YPL139C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
UME1YPL139C CDC16P09798 840 aa8.63□□□□□ -1.03
UME1YPL139C PBY1P38254 753 aa8.63□□□□□ -1.03
UME1YPL139C NOP2P40991 618 aaKnown RBP8.63□□□□□ -1.03
UME1YPL139C IRC8P47046 822 aa8.63□□□□□ -1.03
UME1YPL139C COQ1P18900 473 aa8.62□□□□□ -1.03
UME1YPL139C TIF4631P39935 952 aaKnown RBP8.62□□□□□ -1.03
UME1YPL139C MSH4P40965 878 aaPredicted RBP8.62□□□□□ -1.03
UME1YPL139C SGD1Q06132 899 aa8.62□□□□□ -1.03
UME1YPL139C RFC1P38630 861 aaKnown RBP8.61□□□□□ -1.03
UME1YPL139C RSC30P38781 883 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms