RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C NTE1Q04958 1679 aa6.74□□□□□ -1.33
SNF8YPL002C POL1P13382 1468 aa6.73□□□□□ -1.33
SNF8YPL002C YNR040WP53736 256 aa6.73□□□□□ -1.33
SNF8YPL002C HEH2Q03281 663 aa6.73□□□□□ -1.33
SNF8YPL002C RPO21P04050 1733 aaKnown RBP6.73□□□□□ -1.33
SNF8YPL002C NUP170P38181 1502 aa6.72□□□□□ -1.33
SNF8YPL002C RPC31P17890 251 aa6.72□□□□□ -1.33
SNF8YPL002C UBX7P38349 436 aa6.72□□□□□ -1.33
SNF8YPL002C CAB1Q04430 367 aa6.72□□□□□ -1.33
SNF8YPL002C NCL1P38205 684 aaKnown RBP6.71□□□□□ -1.34
SNF8YPL002C QDR2P40474 542 aa6.71□□□□□ -1.34
SNF8YPL002C TRS33Q99394 268 aa6.71□□□□□ -1.34
SNF8YPL002C YOR1P53049 1477 aa6.71□□□□□ -1.34
SNF8YPL002C VTH1P40438 1549 aa6.71□□□□□ -1.34
SNF8YPL002C VTH2P40890 1549 aa6.71□□□□□ -1.34
SNF8YPL002C PUP1P25043 261 aa6.7□□□□□ -1.34
SNF8YPL002C MCA1Q08601 432 aa6.7□□□□□ -1.34
SNF8YPL002C STU1P38198 1513 aa6.7□□□□□ -1.34
SNF8YPL002C PGM2P37012 569 aaKnown RBP6.69□□□□□ -1.34
SNF8YPL002C APM2P38700 605 aa6.69□□□□□ -1.34
SNF8YPL002C CWH41P53008 833 aa6.69□□□□□ -1.34
SNF8YPL002C NAB2P32505 525 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SNF8YPL002C PRY1P47032 299 aa6.68□□□□□ -1.34
SNF8YPL002C FOX2Q02207 900 aaKnown RBP6.68□□□□□ -1.34
SNF8YPL002C ALG14P38242 237 aa6.67□□□□□ -1.34
SNF8YPL002C NHA1Q99271 985 aa6.67□□□□□ -1.34
SNF8YPL002C YOR093CQ12275 1648 aa6.67□□□□□ -1.34
SNF8YPL002C SNT2P53127 1403 aa6.67□□□□□ -1.34
SNF8YPL002C MYO4P32492 1471 aa6.66□□□□□ -1.34
SNF8YPL002C MRPL33P20084 86 aa6.66□□□□□ -1.34
SNF8YPL002C NAR1P23503 491 aaKnown RBP6.66□□□□□ -1.34
SNF8YPL002C VMA3P25515 160 aa6.66□□□□□ -1.34
SNF8YPL002C AMN1P38285 549 aaPredicted RBP6.66□□□□□ -1.34
SNF8YPL002C YBR197CP38306 217 aa6.66□□□□□ -1.34
SNF8YPL002C MRP10O75012 95 aa6.65□□□□□ -1.34
SNF8YPL002C TAT1P38085 619 aa6.65□□□□□ -1.34
SNF8YPL002C ITC1P53125 1264 aa6.65□□□□□ -1.34
SNF8YPL002C GIS4Q04233 774 aa6.65□□□□□ -1.34
SNF8YPL002C SBP1P10080 294 aaKnown RBP6.64□□□□□ -1.35
SNF8YPL002C IDI1P15496 288 aa6.64□□□□□ -1.35
SNF8YPL002C TPS3P38426 1054 aaKnown RBP6.64□□□□□ -1.35
SNF8YPL002C ULS1Q08562 1619 aa6.64□□□□□ -1.35
SNF8YPL002C SPO14P36126 1683 aa6.64□□□□□ -1.35
SNF8YPL002C STH1P32597 1359 aa6.63□□□□□ -1.35
SNF8YPL002C LSB6P42951 607 aa6.63□□□□□ -1.35
SNF8YPL002C ALD4P46367 519 aaKnown RBP6.63□□□□□ -1.35
SNF8YPL002C BSD2P38356 321 aa6.62□□□□□ -1.35
SNF8YPL002C YML083CQ04526 418 aa6.62□□□□□ -1.35
SNF8YPL002C YOR296WQ08748 1289 aa6.62□□□□□ -1.35
SNF8YPL002C DOP1Q03921 1698 aa6.61□□□□□ -1.35
SNF8YPL002C BUD9P53226 547 aa6.61□□□□□ -1.35
SNF8YPL002C NRD1P53617 575 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35 RIP-Chip
SNF8YPL002C ISC10P32645 267 aa6.6□□□□□ -1.35
SNF8YPL002C DYS1P38791 387 aa6.6□□□□□ -1.35
SNF8YPL002C YER156CP40093 338 aaKnown RBP6.6□□□□□ -1.35
SNF8YPL002C PUN1Q06991 263 aa6.6□□□□□ -1.35
SNF8YPL002C GAS5Q08193 484 aa6.59□□□□□ -1.35
SNF8YPL002C NOB1Q08444 459 aaKnown RBP6.59□□□□□ -1.35
SNF8YPL002C PDR10P51533 1564 aa6.59□□□□□ -1.35
SNF8YPL002C TRM3Q07527 1436 aa6.59□□□□□ -1.36
SNF8YPL002C LDH1P38139 375 aa6.58□□□□□ -1.36
SNF8YPL002C YPL034WQ03083 165 aa6.58□□□□□ -1.36
SNF8YPL002C PUF6Q04373 656 aaKnown RBP6.58□□□□□ -1.36
SNF8YPL002C SNQ2P32568 1501 aaKnown RBP6.58□□□□□ -1.36
SNF8YPL002C GIP1P38229 639 aa6.57□□□□□ -1.36
SNF8YPL002C IQG1Q12280 1495 aa6.56□□□□□ -1.36
SNF8YPL002C RRM3P38766 723 aa6.56□□□□□ -1.36
SNF8YPL002C YTA7P40340 1379 aa6.56□□□□□ -1.36
SNF8YPL002C BUD3P25558 1636 aa6.55□□□□□ -1.36
SNF8YPL002C AI3P03877 415 aa6.55□□□□□ -1.36
SNF8YPL002C SRS2P12954 1174 aa6.55□□□□□ -1.36
SNF8YPL002C CWC15Q03772 175 aaKnown RBP6.55□□□□□ -1.36
SNF8YPL002C PDR12Q02785 1511 aa6.55□□□□□ -1.36
SNF8YPL002C MSN1P22148 382 aa6.54□□□□□ -1.36
SNF8YPL002C SSA4P22202 642 aaKnown RBP6.54□□□□□ -1.36
SNF8YPL002C ISW1P38144 1129 aa6.54□□□□□ -1.36
SNF8YPL002C NUP157P40064 1391 aaKnown RBP6.53□□□□□ -1.36
SNF8YPL002C YIL165CP40446 119 aa6.52□□□□□ -1.37
SNF8YPL002C PPT1P53043 513 aa6.52□□□□□ -1.37
SNF8YPL002C KTR2P33550 425 aa6.51□□□□□ -1.37
SNF8YPL002C TED1P40533 473 aa6.51□□□□□ -1.37
SNF8YPL002C YJL181WP46987 611 aa6.51□□□□□ -1.37
SNF8YPL002C SLP1Q12232 587 aa6.51□□□□□ -1.37
SNF8YPL002C GDB1Q06625 1536 aa6.5□□□□□ -1.37
SNF8YPL002C SAC7P17121 654 aa6.5□□□□□ -1.37
SNF8YPL002C BOI1P38041 980 aaKnown RBP6.5□□□□□ -1.37
SNF8YPL002C YAP3P38749 330 aa6.5□□□□□ -1.37
SNF8YPL002C PNP1Q05788 311 aa6.5□□□□□ -1.37
SNF8YPL002C PGM1P33401 570 aaKnown RBP6.49□□□□□ -1.37
SNF8YPL002C SOK2P53438 785 aaPredicted RBP6.49□□□□□ -1.37
SNF8YPL002C EMG1Q06287 252 aaKnown RBP6.49□□□□□ -1.37
SNF8YPL002C RSC2Q06488 889 aa6.49□□□□□ -1.37
SNF8YPL002C PDR15Q04182 1529 aaKnown RBP6.49□□□□□ -1.37
SNF8YPL002C GIP2P40036 548 aa6.48□□□□□ -1.37
SNF8YPL002C ARI1P53111 347 aaKnown RBP6.48□□□□□ -1.37
SNF8YPL002C ALO1P54783 526 aaKnown RBP6.48□□□□□ -1.37
SNF8YPL002C MLP2P40457 1679 aa6.47□□□□□ -1.37
SNF8YPL002C DNF3Q12674 1656 aa6.47□□□□□ -1.37
SNF8YPL002C TY4B-PA0A0B7P3V8 1104 aa6.47□□□□□ -1.37
SNF8YPL002C SFA1P32771 386 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms