RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W KAR5Q04746 504 aa7.96□□□□□ -1.14
LSC1YOR142W NKP2Q06162 153 aa7.96□□□□□ -1.14
LSC1YOR142W PMA1P05030 918 aaKnown RBP7.95□□□□□ -1.14
LSC1YOR142W GAL2P13181 574 aa7.95□□□□□ -1.14
LSC1YOR142W PBY1P38254 753 aa7.95□□□□□ -1.14
LSC1YOR142W BSD2P38356 321 aa7.95□□□□□ -1.14
LSC1YOR142W PEX29Q03370 554 aa7.95□□□□□ -1.14
LSC1YOR142W PPM2Q08282 695 aa7.95□□□□□ -1.14
LSC1YOR142W LAM4P38800 1345 aa7.95□□□□□ -1.14
LSC1YOR142W TUB2P02557 457 aaKnown RBP7.94□□□□□ -1.14
LSC1YOR142W BBC1P47068 1157 aa7.94□□□□□ -1.14
LSC1YOR142W PCL8Q08966 492 aa7.94□□□□□ -1.14
LSC1YOR142W KTR1P27810 393 aaKnown RBP7.93□□□□□ -1.14
LSC1YOR142W YBL028CP38202 106 aa7.93□□□□□ -1.14
LSC1YOR142W NOP2P40991 618 aaKnown RBP7.93□□□□□ -1.14
LSC1YOR142W IRC8P47046 822 aa7.93□□□□□ -1.14
LSC1YOR142W PKH3Q03306 898 aaPredicted RBP7.93□□□□□ -1.14
LSC1YOR142W CST9Q06032 482 aa7.93□□□□□ -1.14
LSC1YOR142W BRE1Q07457 700 aaKnown RBP7.93□□□□□ -1.14
LSC1YOR142W TIF6Q12522 245 aaKnown RBP7.93□□□□□ -1.14
LSC1YOR142W KIN1P13185 1064 aa7.92□□□□□ -1.14
LSC1YOR142W GEF1P37020 779 aa7.92□□□□□ -1.14
LSC1YOR142W TPS3P38426 1054 aaKnown RBP7.92□□□□□ -1.14
LSC1YOR142W YHL050CP38721 697 aa7.92□□□□□ -1.14
LSC1YOR142W KEL3Q08979 651 aaPredicted RBP7.92□□□□□ -1.14
LSC1YOR142W GIN4Q12263 1142 aa7.92□□□□□ -1.14
LSC1YOR142W NPL4P33755 580 aa7.91□□□□□ -1.14
LSC1YOR142W MOT2P34909 587 aaKnown RBP7.91□□□□□ -1.14
LSC1YOR142W FPR3P38911 411 aaKnown RBP7.91□□□□□ -1.14
LSC1YOR142W MSH4P40965 878 aaPredicted RBP7.91□□□□□ -1.14
LSC1YOR142W IOC3P43596 787 aa7.91□□□□□ -1.14
LSC1YOR142W YDL124WQ07551 312 aaKnown RBP7.91□□□□□ -1.14
LSC1YOR142W COQ1P18900 473 aa7.9□□□□□ -1.14
LSC1YOR142W APE3P37302 537 aaKnown RBP7.9□□□□□ -1.14
LSC1YOR142W OSH3P38713 996 aaKnown RBP7.9□□□□□ -1.14
LSC1YOR142W ACA1P39970 489 aa7.9□□□□□ -1.14
LSC1YOR142W RBA50Q04418 439 aa7.9□□□□□ -1.14
LSC1YOR142W TAH18Q12181 623 aa7.9□□□□□ -1.14
LSC1YOR142W VPS13Q07878 3144 aa7.9□□□□□ -1.14
LSC1YOR142W RAD50P12753 1312 aa7.89□□□□□ -1.15
LSC1YOR142W CHO2P05374 869 aaKnown RBP7.89□□□□□ -1.15
LSC1YOR142W STM1P39015 273 aaKnown RBP7.89□□□□□ -1.15
LSC1YOR142W YPL260WQ08977 551 aa7.89□□□□□ -1.15
LSC1YOR142W RIM20Q12033 661 aa7.89□□□□□ -1.15
LSC1YOR142W SRF1Q12516 437 aa7.89□□□□□ -1.15
LSC1YOR142W PRE8P23639 250 aa7.88□□□□□ -1.15
LSC1YOR142W JIP4Q03361 876 aa7.88□□□□□ -1.15
LSC1YOR142W ECM16Q04217 1267 aaKnown RBP7.88□□□□□ -1.15
LSC1YOR142W FBP1P09201 348 aa7.87□□□□□ -1.15
LSC1YOR142W MPH3P0CE00 602 aa7.87□□□□□ -1.15
LSC1YOR142W OPI1P21957 404 aa7.87□□□□□ -1.15
LSC1YOR142W YDJ1P25491 409 aaKnown RBP7.87□□□□□ -1.15
LSC1YOR142W ASH1P34233 588 aa7.87□□□□□ -1.15
LSC1YOR142W AAP1P37898 856 aaKnown RBP7.87□□□□□ -1.15
LSC1YOR142W VID27P40157 782 aa7.87□□□□□ -1.15
LSC1YOR142W ENP2P48234 707 aaKnown RBP7.87□□□□□ -1.15
LSC1YOR142W VAS1P07806 1104 aaKnown RBP7.86□□□□□ -1.15
LSC1YOR142W KRS1P15180 591 aaKnown RBP7.86□□□□□ -1.15
LSC1YOR142W SRM1P21827 482 aa7.86□□□□□ -1.15
LSC1YOR142W CST26P38226 397 aa7.86□□□□□ -1.15
LSC1YOR142W RSC30P38781 883 aa7.86□□□□□ -1.15
LSC1YOR142W RTS1P38903 757 aa7.86□□□□□ -1.15
LSC1YOR142W SNU71P53207 620 aaKnown RBP7.86□□□□□ -1.15
LSC1YOR142W SKG3Q06315 1026 aa7.86□□□□□ -1.15
LSC1YOR142W LAP2Q10740 671 aa7.86□□□□□ -1.15
LSC1YOR142W RAD61Q99359 647 aa7.86□□□□□ -1.15
LSC1YOR142W CHS3P29465 1165 aa7.85□□□□□ -1.15
LSC1YOR142W PRO3P32263 286 aaKnown RBP7.85□□□□□ -1.15
LSC1YOR142W IXR1P33417 597 aa7.85□□□□□ -1.15
LSC1YOR142W OCT1P35999 772 aa7.85□□□□□ -1.15
LSC1YOR142W MET1P36150 593 aa7.85□□□□□ -1.15
LSC1YOR142W BRN1P38170 754 aa7.85□□□□□ -1.15
LSC1YOR142W SLN1P39928 1220 aaPredicted RBP7.85□□□□□ -1.15
LSC1YOR142W TIF4631P39935 952 aaKnown RBP7.85□□□□□ -1.15
LSC1YOR142W ECM29P38737 1868 aa7.85□□□□□ -1.15
LSC1YOR142W MYO1P08964 1928 aa7.84□□□□□ -1.15
LSC1YOR142W RRP8P38961 392 aaKnown RBP7.84□□□□□ -1.15
LSC1YOR142W NCS6P53088 359 aa7.84□□□□□ -1.15
LSC1YOR142W HDA1P53973 706 aa7.84□□□□□ -1.15
LSC1YOR142W UFD2P54860 961 aa7.84□□□□□ -1.15
LSC1YOR142W RPS15Q01855 142 aaKnown RBP7.84□□□□□ -1.15
LSC1YOR142W MRD1Q06106 887 aaKnown RBP7.84□□□□□ -1.15
LSC1YOR142W NET1P47035 1189 aa7.83□□□□□ -1.16
LSC1YOR142W YJL007CP47080 104 aa7.83□□□□□ -1.16
LSC1YOR142W HXT17P53631 564 aa7.83□□□□□ -1.16
LSC1YOR142W ACE2P21192 770 aa7.82□□□□□ -1.16
LSC1YOR142W MYO3P36006 1272 aa7.82□□□□□ -1.16
LSC1YOR142W ERG7P38604 731 aa7.82□□□□□ -1.16
LSC1YOR142W SPR3P41901 512 aa7.82□□□□□ -1.16
LSC1YOR142W PTK2P47116 818 aaKnown RBP7.82□□□□□ -1.16
LSC1YOR142W FPR4Q06205 392 aaPredicted RBP7.82□□□□□ -1.16
LSC1YOR142W TUS1Q06412 1307 aa7.81□□□□□ -1.16
LSC1YOR142W SAM2P19358 384 aaKnown RBP7.81□□□□□ -1.16
LSC1YOR142W SPB4P25808 606 aaPredicted RBP7.81□□□□□ -1.16
LSC1YOR142W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
LSC1YOR142W HXT13P39924 564 aa7.81□□□□□ -1.16
LSC1YOR142W LYS14P40971 790 aa7.81□□□□□ -1.16
LSC1YOR142W RSM7P47150 247 aa7.81□□□□□ -1.16
LSC1YOR142W GCR2Q01722 534 aa7.81□□□□□ -1.16
LSC1YOR142W YML037CQ03703 340 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms