RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	DNM1	P54861	757 aa		3.9	□□□□□ -1.79
SKP2	YNL311C	YDJ1	P25491	409 aa	Known RBP	3.89	□□□□□ -1.79
SKP2	YNL311C	MGA2	P40578	1113 aa		3.89	□□□□□ -1.79
SKP2	YNL311C	JJJ2	P46997	583 aa		3.89	□□□□□ -1.79
SKP2	YNL311C	FOL2	P51601	243 aa	Known RBP	3.89	□□□□□ -1.79
SKP2	YNL311C	YAF9	P53930	226 aa		3.89	□□□□□ -1.79
SKP2	YNL311C	MGM1	P32266	881 aa		3.88	□□□□□ -1.79
SKP2	YNL311C	STB3	Q12427	513 aa		3.88	□□□□□ -1.79
SKP2	YNL311C	PMA1	P05030	918 aa	Known RBP	3.88	□□□□□ -1.79
SKP2	YNL311C	POL3	P15436	1097 aa		3.88	□□□□□ -1.79
SKP2	YNL311C	IDI1	P15496	288 aa		3.88	□□□□□ -1.79
SKP2	YNL311C	LCB1	P25045	558 aa	Known RBP	3.87	□□□□□ -1.79
SKP2	YNL311C	PER1	P25625	357 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	BCS1	P32839	456 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	BOI1	P38041	980 aa	Known RBP	3.87	□□□□□ -1.79
SKP2	YNL311C	ACA1	P39970	489 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	NUG1	P40010	520 aa	Known RBP	3.87	□□□□□ -1.79
SKP2	YNL311C	PKH1	Q03407	766 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	TOR2	P32600	2474 aa	Known RBP	3.87	□□□□□ -1.79
SKP2	YNL311C	EUG1	P32474	517 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	RTG3	P38165	486 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	PUS6	P53294	404 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	IRC4	Q03036	179 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	VPS64	Q03944	604 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	TOS4	Q06266	489 aa		3.87	□□□□□ -1.79
SKP2	YNL311C	SUB2	Q07478	446 aa	Known RBP	3.87	□□□□□ -1.79
SKP2	YNL311C	ADP1	P25371	1049 aa		3.86	□□□□□ -1.79
SKP2	YNL311C	SYN8	P31377	255 aa		3.86	□□□□□ -1.79
SKP2	YNL311C	KTR4	P38131	464 aa		3.86	□□□□□ -1.79
SKP2	YNL311C	DSF2	P38213	736 aa		3.86	□□□□□ -1.79
SKP2	YNL311C	STM1	P39015	273 aa	Known RBP	3.86	□□□□□ -1.79
SKP2	YNL311C	THI3	Q07471	609 aa		3.86	□□□□□ -1.79
SKP2	YNL311C	SWI1	P09547	1314 aa		3.86	□□□□□ -1.79
SKP2	YNL311C	POL5	P39985	1022 aa	Known RBP	3.86	□□□□□ -1.79
SKP2	YNL311C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
SKP2	YNL311C	YDR524C-B	Q3E6R4	66 aa		3.86	□□□□□ -1.79
SKP2	YNL311C	FAB1	P34756	2278 aa		3.85	□□□□□ -1.79
SKP2	YNL311C	CAN1	P04817	590 aa		3.85	□□□□□ -1.79
SKP2	YNL311C	SPT2	P06843	333 aa	Predicted RBP	3.85	□□□□□ -1.79
SKP2	YNL311C	GPB2	P39717	880 aa		3.85	□□□□□ -1.79
SKP2	YNL311C	HUL4	P40985	892 aa		3.85	□□□□□ -1.79
SKP2	YNL311C	SNU71	P53207	620 aa	Known RBP	3.85	□□□□□ -1.79
SKP2	YNL311C	KTR2	P33550	425 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	POA1	P38218	177 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	HXT5	P38695	592 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	ULI1	P43604	169 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	SRC1	Q03707	834 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	RGA2	Q06407	1009 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	SUP35	P05453	685 aa	Known RBP	3.84	□□□□□ -1.79
SKP2	YNL311C	SPB4	P25808	606 aa	Predicted RBP	3.84	□□□□□ -1.79
SKP2	YNL311C	NGR1	P32831	672 aa	Known RBP	3.84	□□□□□ -1.79
SKP2	YNL311C	NPL4	P33755	580 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	EAP1	P36041	632 aa	Known RBP	3.84	□□□□□ -1.79
SKP2	YNL311C	YKR018C	P36114	725 aa		3.84	□□□□□ -1.79
SKP2	YNL311C	MSH4	P40965	878 aa	Predicted RBP	3.84	□□□□□ -1.79
SKP2	YNL311C	PAP2	P53632	584 aa	Known RBP	3.84	□□□□□ -1.79
SKP2	YNL311C	UBR2	Q07963	1872 aa		3.83	□□□□□ -1.8
SKP2	YNL311C	TIM23	P32897	222 aa		3.83	□□□□□ -1.8
SKP2	YNL311C	BRL1	P38770	471 aa		3.83	□□□□□ -1.8
SKP2	YNL311C	APL6	P46682	809 aa		3.83	□□□□□ -1.8
SKP2	YNL311C	YNL050C	P53952	270 aa		3.83	□□□□□ -1.8
SKP2	YNL311C	VMA2	P16140	517 aa	Known RBP	3.83	□□□□□ -1.8
SKP2	YNL311C	DBP1	P24784	617 aa	Known RBP	3.83	□□□□□ -1.8
SKP2	YNL311C	NOP2	P40991	618 aa	Known RBP	3.83	□□□□□ -1.8
SKP2	YNL311C	TOM71	P38825	639 aa	Known RBP	3.82	□□□□□ -1.8
SKP2	YNL311C	NOC2	P39744	710 aa	Known RBP	3.82	□□□□□ -1.8
SKP2	YNL311C	YFH7	P43591	353 aa		3.82	□□□□□ -1.8
SKP2	YNL311C	MPP10	P47083	593 aa	Known RBP	3.82	□□□□□ -1.8
SKP2	YNL311C	PTK2	P47116	818 aa	Known RBP	3.82	□□□□□ -1.8
SKP2	YNL311C	FCP1	Q03254	732 aa		3.82	□□□□□ -1.8
SKP2	YNL311C	PCL8	Q08966	492 aa		3.82	□□□□□ -1.8
SKP2	YNL311C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
SKP2	YNL311C	HAL5	P38970	855 aa	Known RBP	3.82	□□□□□ -1.8
SKP2	YNL311C	YJR008W	P47085	338 aa		3.82	□□□□□ -1.8
SKP2	YNL311C	AIR2	Q12476	344 aa	Known RBP	3.82	□□□□□ -1.8
SKP2	YNL311C	GUA1	P38625	525 aa	Known RBP	3.81	□□□□□ -1.8
SKP2	YNL311C	VPS29	P38759	282 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	YNL034W	P53963	612 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	YNL018C	P53976	612 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	UBX5	Q06682	500 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	LAM4	P38800	1345 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	CDC19	P00549	500 aa	Known RBP	3.81	□□□□□ -1.8
SKP2	YNL311C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
SKP2	YNL311C	GPT2	P36148	743 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	YBL028C	P38202	106 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	SET1	P38827	1080 aa	Known RBP	3.81	□□□□□ -1.8
SKP2	YNL311C	SKP2	P42843	763 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	HEH2	Q03281	663 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	MTC5	Q03897	1148 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	YOL036W	Q08206	761 aa		3.81	□□□□□ -1.8
SKP2	YNL311C	TUB2	P02557	457 aa	Known RBP	3.8	□□□□□ -1.8
SKP2	YNL311C	ERG12	P07277	443 aa		3.8	□□□□□ -1.8
SKP2	YNL311C	KIN1	P13185	1064 aa		3.8	□□□□□ -1.8
SKP2	YNL311C	IRC10	Q08118	586 aa		3.8	□□□□□ -1.8
SKP2	YNL311C	RTP1	Q12751	981 aa		3.8	□□□□□ -1.8
SKP2	YNL311C	FUN12	P39730	1002 aa	Known RBP	3.79	□□□□□ -1.8
SKP2	YNL311C	MAM1	P40065	302 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	CST6	P40535	587 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	MET13	P53128	600 aa		3.79	□□□□□ -1.8
SKP2	YNL311C	SKY1	Q03656	742 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms