RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C BUD14P27637 709 aa3.7□□□□□ -1.82
SQS1YNL224C GLN1P32288 370 aaKnown RBP3.7□□□□□ -1.82
SQS1YNL224C TFC3P34111 1160 aa3.7□□□□□ -1.82
SQS1YNL224C PRE3P38624 215 aa3.7□□□□□ -1.82
SQS1YNL224C HPC2Q01448 625 aa3.7□□□□□ -1.82
SQS1YNL224C RSM28Q03430 361 aa3.7□□□□□ -1.82
SQS1YNL224C TAP42Q04372 366 aa3.7□□□□□ -1.82
SQS1YNL224C SVF1Q05515 481 aa3.7□□□□□ -1.82
SQS1YNL224C RRI2Q12348 645 aa3.7□□□□□ -1.82
SQS1YNL224C SWI6P09959 803 aa3.7□□□□□ -1.82
SQS1YNL224C SAP30P38429 201 aa3.7□□□□□ -1.82
SQS1YNL224C OTU2P38747 307 aaKnown RBP3.7□□□□□ -1.82
SQS1YNL224C HSE1P38753 452 aa3.7□□□□□ -1.82
SQS1YNL224C GGA2P38817 585 aaKnown RBP3.7□□□□□ -1.82
SQS1YNL224C ALG2P43636 503 aa3.7□□□□□ -1.82
SQS1YNL224C YJR142WP47173 342 aa3.7□□□□□ -1.82
SQS1YNL224C YGR021WP53212 290 aa3.7□□□□□ -1.82
SQS1YNL224C ZDS2P54786 942 aa3.7□□□□□ -1.82
SQS1YNL224C ITT1Q04638 464 aa3.7□□□□□ -1.82
SQS1YNL224C YLH47Q06493 454 aa3.7□□□□□ -1.82
SQS1YNL224C AOS1Q06624 347 aa3.7□□□□□ -1.82
SQS1YNL224C HMI1Q12039 706 aa3.7□□□□□ -1.82
SQS1YNL224C TRP5P00931 707 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C MER1P16523 270 aa3.69□□□□□ -1.82
SQS1YNL224C SMY1P32364 656 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C SFA1P32771 386 aa3.69□□□□□ -1.82
SQS1YNL224C YEL1P34225 687 aa3.69□□□□□ -1.82
SQS1YNL224C UBP14P38237 781 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C APD1P38281 316 aa3.69□□□□□ -1.82
SQS1YNL224C DOT6P40059 670 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C ESF1Q06344 628 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C SWA2Q06677 668 aa3.69□□□□□ -1.82
SQS1YNL224C ISA1Q07821 250 aaPredicted RBP3.69□□□□□ -1.82
SQS1YNL224C TCB1Q12466 1186 aa3.69□□□□□ -1.82
SQS1YNL224C TRP2P00899 507 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C ZUO1P32527 433 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C VPH1P32563 840 aaKnown RBP3.69□□□□□ -1.82
SQS1YNL224C YBL028CP38202 106 aa3.69□□□□□ -1.82
SQS1YNL224C CAJ1P39101 391 aa3.69□□□□□ -1.82
SQS1YNL224C YTA6P40328 754 aa3.69□□□□□ -1.82
SQS1YNL224C RSM25P40496 264 aa3.69□□□□□ -1.82
SQS1YNL224C YJL055WP47044 245 aa3.69□□□□□ -1.82
SQS1YNL224C PEX8P53248 589 aa3.69□□□□□ -1.82
SQS1YNL224C PGC1Q08959 321 aa3.69□□□□□ -1.82
SQS1YNL224C SGS1P35187 1447 aa3.68□□□□□ -1.82
SQS1YNL224C PKC1P24583 1151 aa3.68□□□□□ -1.82
SQS1YNL224C PHO84P25297 587 aaKnown RBP3.68□□□□□ -1.82
SQS1YNL224C DAL80P26343 269 aa3.68□□□□□ -1.82
SQS1YNL224C GRX7P38068 203 aa3.68□□□□□ -1.82
SQS1YNL224C HSM3P38348 480 aa3.68□□□□□ -1.82
SQS1YNL224C CHZ1P40019 153 aaPredicted RBP3.68□□□□□ -1.82
SQS1YNL224C YMR1P47147 688 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
SQS1YNL224C SPO19Q03029 223 aa3.68□□□□□ -1.82
SQS1YNL224C KAR5Q04746 504 aa3.68□□□□□ -1.82
SQS1YNL224C ALR1Q08269 859 aa3.68□□□□□ -1.82
SQS1YNL224C AIM7Q12156 149 aa3.68□□□□□ -1.82
SQS1YNL224C THR4P16120 514 aaKnown RBP3.67□□□□□ -1.82
SQS1YNL224C SEC15P22224 910 aa3.67□□□□□ -1.82
SQS1YNL224C PTR2P32901 601 aa3.67□□□□□ -1.82
SQS1YNL224C SMY2P32909 740 aaKnown RBP3.67□□□□□ -1.82
SQS1YNL224C YAP1801P38856 637 aa3.67□□□□□ -1.82
SQS1YNL224C BFR1P38934 470 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82 RIP-Chip
SQS1YNL224C CCT3P39077 534 aaKnown RBP3.67□□□□□ -1.82
SQS1YNL224C TMN3P40071 706 aa3.67□□□□□ -1.82
SQS1YNL224C YIR042CP40586 236 aa3.67□□□□□ -1.82
SQS1YNL224C LAM5P43560 674 aa3.67□□□□□ -1.82
SQS1YNL224C SUM1P46676 1062 aa3.67□□□□□ -1.82
SQS1YNL224C YNR021WP53723 404 aaKnown RBP3.67□□□□□ -1.82
SQS1YNL224C FPK1P53739 893 aa3.67□□□□□ -1.82
SQS1YNL224C FOL1P53848 824 aa3.67□□□□□ -1.82
SQS1YNL224C GIC2Q06648 383 aa3.67□□□□□ -1.82
SQS1YNL224C OCA4P25366 362 aa3.67□□□□□ -1.82
SQS1YNL224C PEX6P33760 1030 aa3.67□□□□□ -1.82
SQS1YNL224C EXO84P38261 753 aa3.67□□□□□ -1.82
SQS1YNL224C ERC1P38767 581 aa3.67□□□□□ -1.82
SQS1YNL224C TFB3Q03290 321 aa3.67□□□□□ -1.82
SQS1YNL224C RED1P14291 827 aa3.66□□□□□ -1.82
SQS1YNL224C RPB4P20433 221 aaPredicted RBP3.66□□□□□ -1.82
SQS1YNL224C DIT1P21623 536 aa3.66□□□□□ -1.82
SQS1YNL224C MNR2P35724 969 aa3.66□□□□□ -1.82
SQS1YNL224C VRP1P37370 817 aa3.66□□□□□ -1.82
SQS1YNL224C HAS1Q03532 505 aaKnown RBP3.66□□□□□ -1.82
SQS1YNL224C ATG38Q05789 226 aaKnown RBP3.66□□□□□ -1.82
SQS1YNL224C PEX19Q07418 342 aa3.66□□□□□ -1.82
SQS1YNL224C SLX4Q12098 748 aa3.66□□□□□ -1.82
SQS1YNL224C SKI3P17883 1432 aaKnown RBP3.66□□□□□ -1.82
SQS1YNL224C PMS1P14242 873 aa3.66□□□□□ -1.82
SQS1YNL224C PRP22P24384 1145 aaKnown RBP3.66□□□□□ -1.82
SQS1YNL224C CDC3P32457 520 aaKnown RBP3.66□□□□□ -1.82
SQS1YNL224C TIF3P34167 436 aaKnown RBP3.66□□□□□ -1.82
SQS1YNL224C PEX18P38855 283 aa3.66□□□□□ -1.82
SQS1YNL224C YIL055CP40523 627 aaKnown RBP3.66□□□□□ -1.82
SQS1YNL224C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SQS1YNL224C TAF11Q04226 346 aa3.66□□□□□ -1.82
SQS1YNL224C YMR111CQ04461 462 aaPredicted RBP3.66□□□□□ -1.82
SQS1YNL224C UFO1Q04511 668 aa3.66□□□□□ -1.82
SQS1YNL224C MDM38Q08179 573 aa3.66□□□□□ -1.82
SQS1YNL224C STB3Q12427 513 aa3.66□□□□□ -1.82
SQS1YNL224C RTP1Q12751 981 aa3.66□□□□□ -1.82
SQS1YNL224C IKI3Q06706 1349 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms