RNA–Protein interactions for RNA: YNL163C

RIA1, Transcript of Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis, yeast

Gene RIA1, Length 3,333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIA1	YNL163C	ZDS2	P54786	942 aa		4.86	□□□□□ -1.63
RIA1	YNL163C	BMS1	Q08965	1183 aa	Known RBP	4.86	□□□□□ -1.63
RIA1	YNL163C	SER1	P33330	395 aa	Known RBP	4.85	□□□□□ -1.63
RIA1	YNL163C	TIF4632	P39936	914 aa	Known RBP	4.85	□□□□□ -1.63
RIA1	YNL163C	VHR2	P40041	505 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	SMC3	P47037	1230 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	BBC1	P47068	1157 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	RNR2	P09938	399 aa	Known RBP	4.85	□□□□□ -1.63
RIA1	YNL163C	DIT2	P21595	489 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	RSC30	P38781	883 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	PEX19	Q07418	342 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	NOP8	Q08287	484 aa	Predicted RBP	4.85	□□□□□ -1.63
RIA1	YNL163C	THS1	P04801	734 aa	Known RBP	4.85	□□□□□ -1.63
RIA1	YNL163C	YGL140C	P53120	1219 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	HST1	P53685	503 aa		4.85	□□□□□ -1.63
RIA1	YNL163C	ACK1	Q07622	623 aa	Predicted RBP	4.85	□□□□□ -1.63
RIA1	YNL163C	MBR1	P23493	339 aa		4.84	□□□□□ -1.63
RIA1	YNL163C	SPL2	P38839	148 aa		4.84	□□□□□ -1.63
RIA1	YNL163C	CTF18	P49956	741 aa		4.84	□□□□□ -1.63
RIA1	YNL163C	DOS2	P54858	310 aa		4.84	□□□□□ -1.63
RIA1	YNL163C	RRB1	Q04225	511 aa	Known RBP	4.84	□□□□□ -1.63
RIA1	YNL163C	GAL2	P13181	574 aa		4.84	□□□□□ -1.63
RIA1	YNL163C	BDH2	P39713	417 aa		4.84	□□□□□ -1.63
RIA1	YNL163C	MTC3	P53077	123 aa		4.84	□□□□□ -1.63
RIA1	YNL163C	PET123	P17558	318 aa		4.84	□□□□□ -1.64
RIA1	YNL163C	GEF1	P37020	779 aa		4.84	□□□□□ -1.64
RIA1	YNL163C	ECM1	P39715	212 aa		4.84	□□□□□ -1.64
RIA1	YNL163C	SET4	P42948	560 aa		4.84	□□□□□ -1.64
RIA1	YNL163C	ARG82	P07250	355 aa		4.83	□□□□□ -1.64
RIA1	YNL163C	LCB1	P25045	558 aa	Known RBP	4.83	□□□□□ -1.64
RIA1	YNL163C	FRD1	P32614	470 aa	Known RBP	4.83	□□□□□ -1.64
RIA1	YNL163C	APE3	P37302	537 aa	Known RBP	4.83	□□□□□ -1.64
RIA1	YNL163C	MSH4	P40965	878 aa	Predicted RBP	4.83	□□□□□ -1.64
RIA1	YNL163C	SLD2	P34252	453 aa		4.83	□□□□□ -1.64
RIA1	YNL163C	PCH2	P38126	564 aa		4.83	□□□□□ -1.64
RIA1	YNL163C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RIA1	YNL163C	RPN1	P38764	993 aa	Known RBP	4.83	□□□□□ -1.64
RIA1	YNL163C	WRS1	Q12109	432 aa	Known RBP	4.83	□□□□□ -1.64
RIA1	YNL163C	PRX1	P34227	261 aa	Known RBP	4.82	□□□□□ -1.64
RIA1	YNL163C	MAC1	P35192	417 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	MED8	P38304	223 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	NPR3	P38742	1146 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	YMR102C	Q03177	834 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	YKL068W-A	Q3E826	78 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	NOP14	Q99207	810 aa	Known RBP	4.82	□□□□□ -1.64
RIA1	YNL163C	KEX1	P09620	729 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	RPL19A	P0CX82	189 aa	Known RBP	4.82	□□□□□ -1.64
RIA1	YNL163C	RPL19B	P0CX83	189 aa	Predicted RBP	4.82	□□□□□ -1.64
RIA1	YNL163C	CDC15	P27636	974 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	PSE1	P32337	1089 aa	Known RBP	4.82	□□□□□ -1.64
RIA1	YNL163C	APL2	P36000	726 aa	Predicted RBP	4.82	□□□□□ -1.64
RIA1	YNL163C	VPS60	Q03390	229 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	SAS4	Q04003	481 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	GYL1	Q04322	720 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	ATE1	P16639	503 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	HOT1	Q03213	719 aa		4.82	□□□□□ -1.64
RIA1	YNL163C	YER130C	P39959	443 aa		4.81	□□□□□ -1.64
RIA1	YNL163C	CCT5	P40413	562 aa	Known RBP	4.81	□□□□□ -1.64
RIA1	YNL163C	RBA50	Q04418	439 aa		4.81	□□□□□ -1.64
RIA1	YNL163C	PIB2	P53191	635 aa		4.81	□□□□□ -1.64
RIA1	YNL163C	KRE33	P53914	1056 aa	Known RBP	4.81	□□□□□ -1.64
RIA1	YNL163C	PRP42	Q03776	544 aa	Known RBP	4.81	□□□□□ -1.64
RIA1	YNL163C	PPM2	Q08282	695 aa		4.81	□□□□□ -1.64
RIA1	YNL163C	RDS1	P25611	832 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	RTT107	P38850	1070 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
RIA1	YNL163C	CPA2	P03965	1118 aa	Known RBP	4.8	□□□□□ -1.64
RIA1	YNL163C	MRP7	P12687	371 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	SDH2	P21801	266 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	TCD1	P38756	429 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	STU2	P46675	888 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	APL4	Q12028	832 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	RPS19A	P07280	144 aa	Known RBP	4.8	□□□□□ -1.64
RIA1	YNL163C	RPS19B	P07281	144 aa	Predicted RBP	4.8	□□□□□ -1.64
RIA1	YNL163C	GPA1	P08539	472 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	GLO3	P38682	493 aa	Known RBP	4.8	□□□□□ -1.64
RIA1	YNL163C	CIN4	P39110	191 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	RIM20	Q12033	661 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	TUS1	Q06412	1307 aa		4.8	□□□□□ -1.64
RIA1	YNL163C	SNF3	P10870	884 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	MSH3	P25336	1018 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	NUP133	P36161	1157 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	NET1	P47035	1189 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	PEX14	P53112	341 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	PIL1	P53252	339 aa	Known RBP	4.79	□□□□□ -1.64
RIA1	YNL163C	ECM16	Q04217	1267 aa	Known RBP	4.79	□□□□□ -1.64
RIA1	YNL163C	YOL098C	Q12496	1037 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	MGM1	P32266	881 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	PES4	P39684	611 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	HXT10	P43581	546 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	GAS5	Q08193	484 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	PSH1	Q12161	406 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	PDR18	P53756	1333 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	JIP3	O13555	125 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	CYB2	P00175	591 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	GCD7	P32502	381 aa	Predicted RBP	4.79	□□□□□ -1.64
RIA1	YNL163C	WHI3	P34761	661 aa	Known RBP	4.79	□□□□□ -1.64
RIA1	YNL163C	CIC1	P38779	376 aa	Known RBP	4.79	□□□□□ -1.64
RIA1	YNL163C	VPS41	P38959	992 aa		4.79	□□□□□ -1.64
RIA1	YNL163C	WAR1	Q03631	944 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms