RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W PAN5P38787 379 aa6.65□□□□□ -1.35
UBP8YMR223W ALD3P54114 506 aa6.65□□□□□ -1.35
UBP8YMR223W YLR122CQ12312 125 aa6.65□□□□□ -1.35
UBP8YMR223W KTR2P33550 425 aa6.64□□□□□ -1.35
UBP8YMR223W FUR4P05316 633 aaKnown RBP6.63□□□□□ -1.35
UBP8YMR223W IRS4P36115 615 aaKnown RBP6.63□□□□□ -1.35
UBP8YMR223W BOI1P38041 980 aaKnown RBP6.63□□□□□ -1.35
UBP8YMR223W SUT1P53032 299 aaKnown RBP6.63□□□□□ -1.35
UBP8YMR223W TFA2P36145 328 aa6.62□□□□□ -1.35
UBP8YMR223W RAD55P38953 406 aa6.62□□□□□ -1.35
UBP8YMR223W POL5P39985 1022 aaKnown RBP6.62□□□□□ -1.35
UBP8YMR223W SPO71Q03868 1245 aa6.62□□□□□ -1.35
UBP8YMR223W REC8Q12188 680 aa6.62□□□□□ -1.35
UBP8YMR223W CHS2P14180 963 aa6.61□□□□□ -1.35
UBP8YMR223W MAE1P36013 669 aaKnown RBP6.61□□□□□ -1.35
UBP8YMR223W RLF2Q12495 606 aa6.6□□□□□ -1.35
UBP8YMR223W TIF6Q12522 245 aaKnown RBP6.6□□□□□ -1.35
UBP8YMR223W TRP3P00937 484 aa6.59□□□□□ -1.35
UBP8YMR223W YKR073CP36153 106 aa6.59□□□□□ -1.35
UBP8YMR223W PSY2P40164 858 aa6.59□□□□□ -1.35
UBP8YMR223W SUB2Q07478 446 aaKnown RBP6.59□□□□□ -1.35
UBP8YMR223W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
UBP8YMR223W HVG1P0CE11 249 aa6.58□□□□□ -1.36
UBP8YMR223W RPB10P22139 70 aa6.58□□□□□ -1.36
UBP8YMR223W PUB1P32588 453 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
UBP8YMR223W ELG1Q12050 791 aa6.58□□□□□ -1.36
UBP8YMR223W AKR1P39010 764 aa6.57□□□□□ -1.36
UBP8YMR223W SPO74P45819 413 aa6.57□□□□□ -1.36
UBP8YMR223W NCE103P53615 221 aa6.57□□□□□ -1.36
UBP8YMR223W YNR065CP53751 1116 aa6.57□□□□□ -1.36
UBP8YMR223W GLO4Q12320 285 aa6.57□□□□□ -1.36
UBP8YMR223W TOS1P38288 455 aa6.56□□□□□ -1.36
UBP8YMR223W BOL3P39724 118 aa6.56□□□□□ -1.36
UBP8YMR223W IRC24P40580 263 aa6.56□□□□□ -1.36
UBP8YMR223W YJR124CP47159 448 aa6.56□□□□□ -1.36
UBP8YMR223W MSB1P21339 1137 aaKnown RBP6.55□□□□□ -1.36
UBP8YMR223W NAM7P30771 971 aaKnown RBP6.55□□□□□ -1.36
UBP8YMR223W NEO1P40527 1151 aa6.55□□□□□ -1.36
UBP8YMR223W YGR130CP53278 816 aa6.55□□□□□ -1.36
UBP8YMR223W PYC2P32327 1180 aaKnown RBP6.54□□□□□ -1.36
UBP8YMR223W FAR11P53917 953 aa6.54□□□□□ -1.36
UBP8YMR223W HAS1Q03532 505 aaKnown RBP6.54□□□□□ -1.36
UBP8YMR223W LIP5P32875 414 aa6.53□□□□□ -1.36
UBP8YMR223W FET4P40988 552 aa6.53□□□□□ -1.36
UBP8YMR223W BRE4Q07660 1125 aa6.53□□□□□ -1.36
UBP8YMR223W UFD2P54860 961 aa6.52□□□□□ -1.37
UBP8YMR223W CYC7P00045 113 aa6.51□□□□□ -1.37
UBP8YMR223W CTH1P47976 325 aa6.51□□□□□ -1.37
UBP8YMR223W RSC4Q02206 625 aa6.5□□□□□ -1.37
UBP8YMR223W MAG2Q06436 670 aaKnown RBP6.5□□□□□ -1.37
UBP8YMR223W GIC2Q06648 383 aa6.5□□□□□ -1.37
UBP8YMR223W ERS1P17261 260 aa6.5□□□□□ -1.37
UBP8YMR223W KIP3P53086 805 aaKnown RBP6.5□□□□□ -1.37
UBP8YMR223W YLL054CQ12244 843 aa6.5□□□□□ -1.37
UBP8YMR223W AVT1P47082 602 aa6.49□□□□□ -1.37
UBP8YMR223W RPL34AP87262 121 aaPredicted RBP6.49□□□□□ -1.37
UBP8YMR223W YOR223WQ12015 292 aa6.49□□□□□ -1.37
UBP8YMR223W CTR9P89105 1077 aa6.48□□□□□ -1.37
UBP8YMR223W KAR5Q04746 504 aa6.48□□□□□ -1.37
UBP8YMR223W GLO3P38682 493 aaKnown RBP6.47□□□□□ -1.37
UBP8YMR223W ACF4P47129 309 aa6.47□□□□□ -1.37
UBP8YMR223W ATG1P53104 897 aa6.47□□□□□ -1.37
UBP8YMR223W AOS1Q06624 347 aa6.47□□□□□ -1.37
UBP8YMR223W PRP5P21372 849 aaPredicted RBP6.45□□□□□ -1.38
UBP8YMR223W ELM1P32801 640 aa6.45□□□□□ -1.38
UBP8YMR223W QDR1P40475 563 aa6.45□□□□□ -1.38
UBP8YMR223W GCV1P48015 400 aa6.45□□□□□ -1.38
UBP8YMR223W ECM2P38241 364 aaKnown RBP6.44□□□□□ -1.38
UBP8YMR223W RIM11P38615 370 aa6.44□□□□□ -1.38
UBP8YMR223W YIG1Q08956 461 aa6.44□□□□□ -1.38
UBP8YMR223W MSH6Q03834 1242 aa6.43□□□□□ -1.38
UBP8YMR223W YMR074CQ04773 145 aa6.43□□□□□ -1.38
UBP8YMR223W NPR1P22211 790 aa6.42□□□□□ -1.38
UBP8YMR223W MMM1P41800 426 aa6.42□□□□□ -1.38
UBP8YMR223W YNL011CP53980 444 aa6.42□□□□□ -1.38
UBP8YMR223W YOR059CQ08448 450 aaKnown RBP6.42□□□□□ -1.38
UBP8YMR223W NSI1Q12457 570 aa6.42□□□□□ -1.38
UBP8YMR223W COBP00163 385 aa6.42□□□□□ -1.38
UBP8YMR223W HTS1P07263 546 aaKnown RBP6.42□□□□□ -1.38
UBP8YMR223W TRS120Q04183 1289 aa6.42□□□□□ -1.38
UBP8YMR223W CMR1Q12510 522 aaKnown RBP6.42□□□□□ -1.38
UBP8YMR223W CIT3P43635 486 aa6.41□□□□□ -1.38
UBP8YMR223W GPT2P36148 743 aa6.4□□□□□ -1.39
UBP8YMR223W SAP155P43612 1002 aa6.4□□□□□ -1.39
UBP8YMR223W MEC3Q02574 474 aa6.4□□□□□ -1.39
UBP8YMR223W DOT1Q04089 582 aaKnown RBP6.4□□□□□ -1.39
UBP8YMR223W SSA1P10591 642 aaKnown RBP6.39□□□□□ -1.39
UBP8YMR223W CDC55Q00362 526 aa6.39□□□□□ -1.39
UBP8YMR223W BSC2Q05611 235 aa6.39□□□□□ -1.39
UBP8YMR223W MNL2Q12205 849 aa6.38□□□□□ -1.39
UBP8YMR223W UTP22P53254 1237 aaPredicted RBP6.37□□□□□ -1.39
UBP8YMR223W PMT7Q06644 662 aa6.37□□□□□ -1.39
UBP8YMR223W FLP1P03870 423 aa6.36□□□□□ -1.39
UBP8YMR223W TRL1P09880 827 aaKnown RBP6.36□□□□□ -1.39
UBP8YMR223W DUR3P33413 735 aa6.36□□□□□ -1.39
UBP8YMR223W ARL1P38116 183 aaKnown RBP6.36□□□□□ -1.39
UBP8YMR223W ECL1P48235 211 aa6.36□□□□□ -1.39
UBP8YMR223W SDH1Q00711 640 aa6.36□□□□□ -1.39
UBP8YMR223W GCD1P09032 578 aaPredicted RBP6.35□□□□□ -1.39
UBP8YMR223W YHL008CP38750 627 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms