RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C FUS1P11710 512 aa4.52□□□□□ -1.69
VTI1YMR197C RPB10P22139 70 aa4.52□□□□□ -1.69
VTI1YMR197C SAF1P38352 637 aa4.52□□□□□ -1.69
VTI1YMR197C BIO5P53744 561 aaKnown RBP4.52□□□□□ -1.69
VTI1YMR197C MED7Q08278 222 aa4.52□□□□□ -1.69
VTI1YMR197C SOG2Q08817 791 aa4.52□□□□□ -1.69
VTI1YMR197C NTA1P40354 457 aa4.51□□□□□ -1.69
VTI1YMR197C GUP1P53154 560 aa4.51□□□□□ -1.69
VTI1YMR197C CHS2P14180 963 aa4.5□□□□□ -1.69
VTI1YMR197C NAM7P30771 971 aaKnown RBP4.5□□□□□ -1.69
VTI1YMR197C RAD55P38953 406 aa4.5□□□□□ -1.69
VTI1YMR197C LEM3P42838 414 aa4.5□□□□□ -1.69
VTI1YMR197C YGR130CP53278 816 aa4.5□□□□□ -1.69
VTI1YMR197C REC8Q12188 680 aa4.5□□□□□ -1.69
VTI1YMR197C TIF6Q12522 245 aaKnown RBP4.5□□□□□ -1.69
VTI1YMR197C FUR4P05316 633 aaKnown RBP4.49□□□□□ -1.69
VTI1YMR197C LIP5P32875 414 aa4.49□□□□□ -1.69
VTI1YMR197C TOS1P38288 455 aa4.49□□□□□ -1.69
VTI1YMR197C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
VTI1YMR197C LSO1Q3E827 93 aa4.49□□□□□ -1.69
VTI1YMR197C SMC1P32908 1225 aa4.48□□□□□ -1.69
VTI1YMR197C MAE1P36013 669 aaKnown RBP4.48□□□□□ -1.69
VTI1YMR197C BOL3P39724 118 aa4.48□□□□□ -1.69
VTI1YMR197C POL5P39985 1022 aaKnown RBP4.48□□□□□ -1.69
VTI1YMR197C PSY2P40164 858 aa4.48□□□□□ -1.69
VTI1YMR197C NEO1P40527 1151 aa4.48□□□□□ -1.69
VTI1YMR197C IRS4P36115 615 aaKnown RBP4.47□□□□□ -1.69
VTI1YMR197C YNR065CP53751 1116 aa4.47□□□□□ -1.69
VTI1YMR197C SPO71Q03868 1245 aa4.47□□□□□ -1.69
VTI1YMR197C ELG1Q12050 791 aa4.47□□□□□ -1.69
VTI1YMR197C ERS1P17261 260 aa4.46□□□□□ -1.7
VTI1YMR197C YJR124CP47159 448 aa4.46□□□□□ -1.7
VTI1YMR197C SUB2Q07478 446 aaKnown RBP4.46□□□□□ -1.7
VTI1YMR197C PYC2P32327 1180 aaKnown RBP4.45□□□□□ -1.7
VTI1YMR197C PUB1P32588 453 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
VTI1YMR197C AVT1P47082 602 aa4.45□□□□□ -1.7
VTI1YMR197C CTH1P47976 325 aa4.45□□□□□ -1.7
VTI1YMR197C NCE103P53615 221 aa4.45□□□□□ -1.7
VTI1YMR197C HAS1Q03532 505 aaKnown RBP4.45□□□□□ -1.7
VTI1YMR197C BRE4Q07660 1125 aa4.45□□□□□ -1.7
VTI1YMR197C CYC7P00045 113 aa4.44□□□□□ -1.7
VTI1YMR197C HVG1P0CE11 249 aa4.44□□□□□ -1.7
VTI1YMR197C IRC24P40580 263 aa4.44□□□□□ -1.7
VTI1YMR197C SPO74P45819 413 aa4.44□□□□□ -1.7
VTI1YMR197C GLO4Q12320 285 aa4.44□□□□□ -1.7
VTI1YMR197C FET4P40988 552 aa4.43□□□□□ -1.7
VTI1YMR197C KIP3P53086 805 aaKnown RBP4.43□□□□□ -1.7
VTI1YMR197C MAG2Q06436 670 aaKnown RBP4.43□□□□□ -1.7
VTI1YMR197C MSB1P21339 1137 aaKnown RBP4.42□□□□□ -1.7
VTI1YMR197C GLO3P38682 493 aaKnown RBP4.41□□□□□ -1.7
VTI1YMR197C FAR11P53917 953 aa4.41□□□□□ -1.7
VTI1YMR197C KAR5Q04746 504 aa4.41□□□□□ -1.7
VTI1YMR197C GIC2Q06648 383 aa4.41□□□□□ -1.7
VTI1YMR197C RLF2Q12495 606 aa4.41□□□□□ -1.7
VTI1YMR197C RPL34AP87262 121 aaPredicted RBP4.4□□□□□ -1.71
VTI1YMR197C CTR9P89105 1077 aa4.4□□□□□ -1.71
VTI1YMR197C YMR074CQ04773 145 aa4.4□□□□□ -1.71
VTI1YMR197C QDR1P40475 563 aa4.39□□□□□ -1.71
VTI1YMR197C SDH1Q00711 640 aa4.39□□□□□ -1.71
VTI1YMR197C YOR223WQ12015 292 aa4.39□□□□□ -1.71
VTI1YMR197C COBP00163 385 aa4.38□□□□□ -1.71
VTI1YMR197C UFD2P54860 961 aa4.38□□□□□ -1.71
VTI1YMR197C GPT2P36148 743 aa4.37□□□□□ -1.71
VTI1YMR197C SEA4P38164 1038 aa4.37□□□□□ -1.71
VTI1YMR197C GCD1P09032 578 aaPredicted RBP4.36□□□□□ -1.71
VTI1YMR197C ECM2P38241 364 aaKnown RBP4.36□□□□□ -1.71
VTI1YMR197C MMM1P41800 426 aa4.36□□□□□ -1.71
VTI1YMR197C ATG1P53104 897 aa4.36□□□□□ -1.71
VTI1YMR197C RSC4Q02206 625 aa4.36□□□□□ -1.71
VTI1YMR197C AOS1Q06624 347 aa4.36□□□□□ -1.71
VTI1YMR197C NPR1P22211 790 aa4.35□□□□□ -1.71
VTI1YMR197C ELM1P32801 640 aa4.35□□□□□ -1.71
VTI1YMR197C WHI3P34761 661 aaKnown RBP4.35□□□□□ -1.71
VTI1YMR197C DOT1Q04089 582 aaKnown RBP4.35□□□□□ -1.71
VTI1YMR197C YIG1Q08956 461 aa4.35□□□□□ -1.71
VTI1YMR197C CMR1Q12510 522 aaKnown RBP4.35□□□□□ -1.71
VTI1YMR197C HTS1P07263 546 aaKnown RBP4.34□□□□□ -1.71
VTI1YMR197C DUR3P33413 735 aa4.34□□□□□ -1.71
VTI1YMR197C RIM11P38615 370 aa4.34□□□□□ -1.71
VTI1YMR197C CIT3P43635 486 aa4.34□□□□□ -1.71
VTI1YMR197C GCV1P48015 400 aa4.34□□□□□ -1.71
VTI1YMR197C YLL054CQ12244 843 aa4.34□□□□□ -1.71
VTI1YMR197C TRS120Q04183 1289 aa4.33□□□□□ -1.72
VTI1YMR197C LRG1P35688 1017 aa4.32□□□□□ -1.72
VTI1YMR197C POL12P38121 705 aaPredicted RBP4.32□□□□□ -1.72
VTI1YMR197C YHL008CP38750 627 aa4.32□□□□□ -1.72
VTI1YMR197C ACF4P47129 309 aa4.32□□□□□ -1.72
VTI1YMR197C BSC2Q05611 235 aa4.32□□□□□ -1.72
VTI1YMR197C NSI1Q12457 570 aa4.32□□□□□ -1.72
VTI1YMR197C PRP5P21372 849 aaPredicted RBP4.31□□□□□ -1.72
VTI1YMR197C RNQ1P25367 405 aa4.31□□□□□ -1.72
VTI1YMR197C SEG2P34250 1132 aa4.31□□□□□ -1.72
VTI1YMR197C RCM1P53972 490 aa4.31□□□□□ -1.72
VTI1YMR197C YNL011CP53980 444 aa4.31□□□□□ -1.72
VTI1YMR197C MSH6Q03834 1242 aa4.31□□□□□ -1.72
VTI1YMR197C SSA1P10591 642 aaKnown RBP4.3□□□□□ -1.72
VTI1YMR197C CDC55Q00362 526 aa4.3□□□□□ -1.72
VTI1YMR197C MEC3Q02574 474 aa4.3□□□□□ -1.72
VTI1YMR197C YOR059CQ08448 450 aaKnown RBP4.3□□□□□ -1.72
VTI1YMR197C ALG6Q12001 544 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms