RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W NAF1P53919 492 aaKnown RBP4.46□□□□□ -1.7
ECM16YMR128W AIM44Q99299 758 aa4.46□□□□□ -1.7
ECM16YMR128W NUD1P32336 851 aa4.45□□□□□ -1.7
ECM16YMR128W MNR2P35724 969 aa4.45□□□□□ -1.7
ECM16YMR128W PIL1P53252 339 aaKnown RBP4.45□□□□□ -1.7
ECM16YMR128W HST1P53685 503 aa4.45□□□□□ -1.7
ECM16YMR128W TOS4Q06266 489 aa4.45□□□□□ -1.7
ECM16YMR128W ADE6P38972 1358 aaKnown RBP4.45□□□□□ -1.7
ECM16YMR128W ZDS2P54786 942 aa4.45□□□□□ -1.7
ECM16YMR128W FRT1Q99332 602 aa4.45□□□□□ -1.7
ECM16YMR128W URB1P34241 1764 aaKnown RBP4.45□□□□□ -1.7
ECM16YMR128W VAS1P07806 1104 aaKnown RBP4.45□□□□□ -1.7
ECM16YMR128W FRS2P15625 503 aaKnown RBP4.45□□□□□ -1.7
ECM16YMR128W TIM50Q02776 476 aa4.45□□□□□ -1.7
ECM16YMR128W ARG8P18544 423 aa4.44□□□□□ -1.7
ECM16YMR128W HSP104P31539 908 aaKnown RBP4.44□□□□□ -1.7
ECM16YMR128W BOI1P38041 980 aaKnown RBP4.44□□□□□ -1.7
ECM16YMR128W ERP5P38819 212 aa4.44□□□□□ -1.7
ECM16YMR128W ENT3P47160 408 aa4.44□□□□□ -1.7
ECM16YMR128W TIF11P38912 153 aaKnown RBP4.44□□□□□ -1.7
ECM16YMR128W YGR130CP53278 816 aa4.44□□□□□ -1.7
ECM16YMR128W YNR029CP53729 429 aaKnown RBP4.44□□□□□ -1.7
ECM16YMR128W COG8Q04632 607 aa4.44□□□□□ -1.7
ECM16YMR128W BIK1P11709 440 aa4.44□□□□□ -1.7
ECM16YMR128W ACS2P52910 683 aaKnown RBP4.44□□□□□ -1.7
ECM16YMR128W ISU2Q12056 156 aa4.44□□□□□ -1.7
ECM16YMR128W WSC3Q12215 556 aa4.44□□□□□ -1.7
ECM16YMR128W TRS33Q99394 268 aa4.44□□□□□ -1.7
ECM16YMR128W MFT1P33441 392 aaKnown RBP4.43□□□□□ -1.7
ECM16YMR128W MIC60P36112 540 aa4.43□□□□□ -1.7
ECM16YMR128W BDP1P46678 594 aa4.43□□□□□ -1.7
ECM16YMR128W ECM16Q04217 1267 aaKnown RBP4.43□□□□□ -1.7
ECM16YMR128W LYS2P07702 1392 aa4.43□□□□□ -1.7
ECM16YMR128W RNR2P09938 399 aaKnown RBP4.43□□□□□ -1.7
ECM16YMR128W RRN6P32786 894 aa4.43□□□□□ -1.7
ECM16YMR128W KRI1P42846 591 aaKnown RBP4.43□□□□□ -1.7
ECM16YMR128W PRP43P53131 767 aaKnown RBP4.43□□□□□ -1.7
ECM16YMR128W LAM6Q08001 693 aa4.43□□□□□ -1.7
ECM16YMR128W PDC1P06169 563 aaKnown RBP4.42□□□□□ -1.7
ECM16YMR128W MET4P32389 672 aa4.42□□□□□ -1.7
ECM16YMR128W GCD7P32502 381 aaPredicted RBP4.42□□□□□ -1.7
ECM16YMR128W EMP47P43555 445 aa4.42□□□□□ -1.7
ECM16YMR128W TPM2P40414 161 aa4.42□□□□□ -1.7
ECM16YMR128W ULI1P43604 169 aa4.42□□□□□ -1.7
ECM16YMR128W FKS3Q04952 1785 aa4.42□□□□□ -1.7
ECM16YMR128W MAG2Q06436 670 aaKnown RBP4.42□□□□□ -1.7
ECM16YMR128W SLA1P32790 1244 aa4.42□□□□□ -1.7
ECM16YMR128W MRPL10P36520 322 aa4.42□□□□□ -1.7
ECM16YMR128W AAP1P37898 856 aaKnown RBP4.42□□□□□ -1.7
ECM16YMR128W BOI2P39969 1040 aa4.42□□□□□ -1.7
ECM16YMR128W PIB2P53191 635 aa4.42□□□□□ -1.7
ECM16YMR128W YPR097WQ06839 1073 aa4.42□□□□□ -1.7
ECM16YMR128W PEX19Q07418 342 aa4.42□□□□□ -1.7
ECM16YMR128W HAT1Q12341 374 aa4.42□□□□□ -1.7
ECM16YMR128W LDB19Q12502 818 aa4.42□□□□□ -1.7
ECM16YMR128W CYC8P14922 966 aa4.41□□□□□ -1.7
ECM16YMR128W SPT5P27692 1063 aaKnown RBP4.41□□□□□ -1.7
ECM16YMR128W MAM1P40065 302 aa4.41□□□□□ -1.7
ECM16YMR128W RSM25P40496 264 aa4.41□□□□□ -1.7
ECM16YMR128W HOS3Q02959 697 aaKnown RBP4.41□□□□□ -1.7
ECM16YMR128W SES1P07284 462 aaKnown RBP4.41□□□□□ -1.7
ECM16YMR128W GAL2P13181 574 aa4.41□□□□□ -1.7
ECM16YMR128W KTR3P38130 404 aaPredicted RBP4.41□□□□□ -1.7
ECM16YMR128W AIM9P40053 627 aaKnown RBP4.41□□□□□ -1.7
ECM16YMR128W HXT10P43581 546 aa4.41□□□□□ -1.7
ECM16YMR128W PUS6P53294 404 aa4.41□□□□□ -1.7
ECM16YMR128W CWC22P53333 577 aaKnown RBP4.41□□□□□ -1.7
ECM16YMR128W YNL035CP53962 389 aaKnown RBP4.41□□□□□ -1.7
ECM16YMR128W ECM23Q02710 187 aa4.41□□□□□ -1.7
ECM16YMR128W RIM20Q12033 661 aa4.41□□□□□ -1.7
ECM16YMR128W TAT2P38967 592 aa4.41□□□□□ -1.7
ECM16YMR128W FYV10P40492 516 aa4.41□□□□□ -1.7
ECM16YMR128W YGL082WP53155 381 aa4.41□□□□□ -1.7
ECM16YMR128W MRPS35P53292 345 aa4.41□□□□□ -1.7
ECM16YMR128W YDL206WQ12424 762 aa4.41□□□□□ -1.7
ECM16YMR128W RAD4P14736 754 aa4.4□□□□□ -1.7
ECM16YMR128W HYR1P40581 163 aaKnown RBP4.4□□□□□ -1.7
ECM16YMR128W ARH1P48360 493 aa4.4□□□□□ -1.7
ECM16YMR128W VMS1Q04311 632 aaKnown RBP4.4□□□□□ -1.7
ECM16YMR128W CDC3P32457 520 aaKnown RBP4.4□□□□□ -1.71
ECM16YMR128W CTF18P49956 741 aa4.4□□□□□ -1.71
ECM16YMR128W VAC17P25591 423 aa4.4□□□□□ -1.71
ECM16YMR128W SEC61P32915 480 aa4.4□□□□□ -1.71
ECM16YMR128W NPR3P38742 1146 aa4.4□□□□□ -1.71
ECM16YMR128W MPE1P35728 441 aaKnown RBP4.39□□□□□ -1.71
ECM16YMR128W OCA5P38738 679 aa4.39□□□□□ -1.71
ECM16YMR128W PRX1P34227 261 aaKnown RBP4.39□□□□□ -1.71
ECM16YMR128W EAP1P36041 632 aaKnown RBP4.39□□□□□ -1.71
ECM16YMR128W VID28P40547 921 aa4.39□□□□□ -1.71
ECM16YMR128W YDR306CQ06640 478 aa4.39□□□□□ -1.71
ECM16YMR128W PGA3Q12746 312 aaKnown RBP4.39□□□□□ -1.71
ECM16YMR128W MRP7P12687 371 aa4.39□□□□□ -1.71
ECM16YMR128W UTP13Q05946 817 aaKnown RBP4.39□□□□□ -1.71
ECM16YMR128W ESC2Q06340 456 aa4.39□□□□□ -1.71
ECM16YMR128W YOL057WQ08225 711 aa4.39□□□□□ -1.71
ECM16YMR128W MSC6Q08818 692 aaKnown RBP4.39□□□□□ -1.71
ECM16YMR128W AIR2Q12476 344 aaKnown RBP4.39□□□□□ -1.71
ECM16YMR128W CPA2P03965 1118 aaKnown RBP4.38□□□□□ -1.71
ECM16YMR128W RPL19AP0CX82 189 aaKnown RBP4.38□□□□□ -1.71
ECM16YMR128W RPL19BP0CX83 189 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms