RNA–Protein interactions for RNA: YLR401C

DUS3, Transcript of Dihydrouridine synthase, yeastyeast

Gene DUS3, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DUS3YLR401C YEL043WP32618 956 aa8.89□□□□□ -0.99
DUS3YLR401C TPS3P38426 1054 aaKnown RBP8.89□□□□□ -0.99
DUS3YLR401C VID28P40547 921 aa8.89□□□□□ -0.99
DUS3YLR401C MGA2P40578 1113 aa8.89□□□□□ -0.99
DUS3YLR401C PRE10P21242 288 aaKnown RBP RIP-Chip data8.88□□□□□ -0.99not detected
DUS3YLR401C YME2P32843 850 aa8.88□□□□□ -0.99
DUS3YLR401C YJR079WP47126 109 aa8.88□□□□□ -0.99
DUS3YLR401C PSK2Q08217 1101 aa8.88□□□□□ -0.99
DUS3YLR401C PDR18P53756 1333 aa8.88□□□□□ -0.99
DUS3YLR401C RPS24AP0CX31 135 aaKnown RBP8.88□□□□□ -0.99
DUS3YLR401C RPS24BP0CX32 135 aaKnown RBP8.88□□□□□ -0.99
DUS3YLR401C PHO13P19881 312 aa8.88□□□□□ -0.99
DUS3YLR401C SEC26P41810 973 aaKnown RBP8.88□□□□□ -0.99
DUS3YLR401C ALD2P47771 506 aa8.88□□□□□ -0.99
DUS3YLR401C RRP15Q06511 250 aaPredicted RBP8.88□□□□□ -0.99
DUS3YLR401C PDC1P06169 563 aaKnown RBP8.87□□□□□ -0.99
DUS3YLR401C CCC2P38995 1004 aa8.87□□□□□ -0.99
DUS3YLR401C MIC19P43594 170 aa8.87□□□□□ -0.99
DUS3YLR401C ALF1P53904 254 aa8.87□□□□□ -0.99
DUS3YLR401C SPO19Q03029 223 aa8.87□□□□□ -0.99
DUS3YLR401C BRE1Q07457 700 aaKnown RBP8.87□□□□□ -0.99
DUS3YLR401C PXL1P36166 706 aa8.87□□□□□ -0.99
DUS3YLR401C BOP3P53958 396 aa8.87□□□□□ -0.99
DUS3YLR401C STE23Q06010 1027 aa8.87□□□□□ -0.99
DUS3YLR401C CMS1Q07897 291 aaKnown RBP8.87□□□□□ -0.99
DUS3YLR401C SLP1Q12232 587 aa8.87□□□□□ -0.99
DUS3YLR401C PMR1P13586 950 aa8.86□□□□□ -0.99
DUS3YLR401C KRS1P15180 591 aaKnown RBP8.86□□□□□ -0.99
DUS3YLR401C REB1P21538 810 aa8.86□□□□□ -0.99
DUS3YLR401C YKT6P36015 200 aaKnown RBP8.86□□□□□ -0.99
DUS3YLR401C RFT1P38206 574 aaPredicted RBP8.86□□□□□ -0.99
DUS3YLR401C YHL017WP38745 532 aa8.86□□□□□ -0.99
DUS3YLR401C MRP7P12687 371 aa8.85□□□□□ -0.99
DUS3YLR401C MRPS28P21771 286 aa8.85□□□□□ -0.99
DUS3YLR401C YSW1P38280 609 aa8.85□□□□□ -0.99
DUS3YLR401C VPS8P39702 1274 aa8.85□□□□□ -0.99
DUS3YLR401C UBX2Q04228 584 aa8.85□□□□□ -0.99
DUS3YLR401C VPS38Q05919 439 aa8.85□□□□□ -0.99
DUS3YLR401C YOL098CQ12496 1037 aa8.85□□□□□ -0.99
DUS3YLR401C SMC6Q12749 1114 aa8.85□□□□□ -0.99
DUS3YLR401C RAD1P06777 1100 aa8.85□□□□□ -0.99
DUS3YLR401C MCM4P30665 933 aaKnown RBP8.85□□□□□ -0.99
DUS3YLR401C PTC4P38089 393 aa8.85□□□□□ -0.99
DUS3YLR401C ISW1P38144 1129 aa8.85□□□□□ -0.99
DUS3YLR401C VTC3Q02725 835 aa8.85□□□□□ -0.99
DUS3YLR401C BUD16P39988 312 aa8.84□□□□□ -0.99
DUS3YLR401C HOS4P40480 1083 aa8.84□□□□□ -0.99
DUS3YLR401C LCB5Q06147 687 aaKnown RBP8.84□□□□□ -0.99
DUS3YLR401C PGA3Q12746 312 aaKnown RBP8.84□□□□□ -0.99
DUS3YLR401C PDB1P32473 366 aaKnown RBP8.83□□□□□ -1
DUS3YLR401C TRS85P46944 698 aa8.83□□□□□ -1
DUS3YLR401C YOL057WQ08225 711 aa8.83□□□□□ -1
DUS3YLR401C MAK11P20484 414 aaKnown RBP8.83□□□□□ -1
DUS3YLR401C YKR018CP36114 725 aa8.83□□□□□ -1
DUS3YLR401C ORM2Q06144 216 aa8.83□□□□□ -1
DUS3YLR401C OSH2Q12451 1283 aa8.83□□□□□ -1
DUS3YLR401C ENT1Q12518 454 aa8.83□□□□□ -1
DUS3YLR401C GAL11P19659 1081 aa8.82□□□□□ -1
DUS3YLR401C MRX1P40050 688 aa8.82□□□□□ -1
DUS3YLR401C ALO1P54783 526 aaKnown RBP8.82□□□□□ -1
DUS3YLR401C YDR306CQ06640 478 aa8.82□□□□□ -1
DUS3YLR401C NCB2Q92317 146 aa8.82□□□□□ -1
DUS3YLR401C MATALPHA2P0CY08 210 aa8.81□□□□□ -1
DUS3YLR401C HMLALPHA2P0CY09 210 aa8.81□□□□□ -1
DUS3YLR401C KTR1P27810 393 aaKnown RBP8.81□□□□□ -1
DUS3YLR401C PRP45P28004 379 aaPredicted RBP8.81□□□□□ -1
DUS3YLR401C KTR3P38130 404 aaPredicted RBP8.81□□□□□ -1
DUS3YLR401C CIC1P38779 376 aaKnown RBP8.81□□□□□ -1
DUS3YLR401C PIB2P53191 635 aa8.81□□□□□ -1
DUS3YLR401C CUS1Q02554 436 aaPredicted RBP8.81□□□□□ -1
DUS3YLR401C EIS1Q05050 843 aaKnown RBP8.81□□□□□ -1
DUS3YLR401C ISW2Q08773 1120 aa8.81□□□□□ -1
DUS3YLR401C KAR3P17119 729 aa8.81□□□□□ -1
DUS3YLR401C RAD53P22216 821 aa8.81□□□□□ -1
DUS3YLR401C ARG1P22768 420 aa8.81□□□□□ -1
DUS3YLR401C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.81□□□□□ -1not detected
DUS3YLR401C SMF1P38925 575 aa8.81□□□□□ -1
DUS3YLR401C PRP43P53131 767 aaKnown RBP8.81□□□□□ -1
DUS3YLR401C YLR407WQ06070 228 aa8.81□□□□□ -1
DUS3YLR401C RMP1Q12530 201 aa8.81□□□□□ -1
DUS3YLR401C SEC23P15303 768 aaKnown RBP8.8□□□□□ -1
DUS3YLR401C UBP14P38237 781 aaKnown RBP8.8□□□□□ -1
DUS3YLR401C BUD6P41697 788 aa8.8□□□□□ -1
DUS3YLR401C ILM1P47155 203 aa8.8□□□□□ -1
DUS3YLR401C NCS2P53923 493 aaPredicted RBP8.8□□□□□ -1
DUS3YLR401C VAC14Q06708 880 aa8.8□□□□□ -1
DUS3YLR401C YVC1Q12324 675 aa8.8□□□□□ -1
DUS3YLR401C TY4A-HQ6Q5P6 413 aa8.8□□□□□ -1
DUS3YLR401C YIL177CP40434 1758 aa8.8□□□□□ -1
DUS3YLR401C YJL225CP40889 1758 aa8.8□□□□□ -1
DUS3YLR401C FBP26P32604 452 aa8.8□□□□□ -1
DUS3YLR401C NFU1P32860 256 aa8.8□□□□□ -1
DUS3YLR401C YKE2P52553 114 aa8.8□□□□□ -1
DUS3YLR401C SEC5P89102 971 aa8.8□□□□□ -1
DUS3YLR401C DPL1Q05567 589 aa8.8□□□□□ -1
DUS3YLR401C NOP6Q07623 225 aaKnown RBP8.8□□□□□ -1
DUS3YLR401C ENV9Q08651 330 aa8.8□□□□□ -1
DUS3YLR401C MLC1P53141 149 aa8.79□□□□□ -1
DUS3YLR401C NUR1Q12066 484 aa8.79□□□□□ -1
DUS3YLR401C RAD4P14736 754 aa8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms