RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W SEC20P28791 383 aa5.88□□□□□ -1.47
VPS38YLR360W YFL066CP43538 392 aa5.88□□□□□ -1.47
VPS38YLR360W LSB3P43603 459 aaKnown RBP5.88□□□□□ -1.47
VPS38YLR360W GIS4Q04233 774 aa5.88□□□□□ -1.47
VPS38YLR360W TDA6Q06466 467 aa5.88□□□□□ -1.47
VPS38YLR360W PYC2P32327 1180 aaKnown RBP5.87□□□□□ -1.47
VPS38YLR360W SOK2P53438 785 aaPredicted RBP5.87□□□□□ -1.47
VPS38YLR360W FUS1P11710 512 aa5.86□□□□□ -1.47
VPS38YLR360W PPX1P38698 397 aa5.86□□□□□ -1.47
VPS38YLR360W YHL008CP38750 627 aa5.86□□□□□ -1.47
VPS38YLR360W SEN54Q02825 467 aaPredicted RBP5.86□□□□□ -1.47
VPS38YLR360W BIO5P53744 561 aaKnown RBP5.85□□□□□ -1.47
VPS38YLR360W ALD3P54114 506 aa5.85□□□□□ -1.47
VPS38YLR360W GIP2P40036 548 aa5.84□□□□□ -1.47
VPS38YLR360W SAM37P50110 327 aa5.84□□□□□ -1.47
VPS38YLR360W CTR9P89105 1077 aa5.84□□□□□ -1.47
VPS38YLR360W NOC3Q07896 663 aaPredicted RBP5.84□□□□□ -1.47
VPS38YLR360W INP54Q08227 384 aaKnown RBP5.84□□□□□ -1.47
VPS38YLR360W NOP8Q08287 484 aaPredicted RBP5.84□□□□□ -1.47
VPS38YLR360W WHI5Q12416 295 aa5.84□□□□□ -1.47
VPS38YLR360W TFA2P36145 328 aa5.83□□□□□ -1.48
VPS38YLR360W TED1P40533 473 aa5.83□□□□□ -1.48
VPS38YLR360W YMR187CQ03236 431 aa5.83□□□□□ -1.48
VPS38YLR360W FLP1P03870 423 aa5.82□□□□□ -1.48
VPS38YLR360W MET4P32389 672 aa5.82□□□□□ -1.48
VPS38YLR360W NEO1P40527 1151 aa5.82□□□□□ -1.48
VPS38YLR360W YJR124CP47159 448 aa5.82□□□□□ -1.48
VPS38YLR360W GUP1P53154 560 aa5.82□□□□□ -1.48
VPS38YLR360W SOG2Q08817 791 aa5.82□□□□□ -1.48
VPS38YLR360W SLP1Q12232 587 aa5.82□□□□□ -1.48
VPS38YLR360W COBP00163 385 aa5.81□□□□□ -1.48
VPS38YLR360W MCX1P38323 520 aaPredicted RBP5.81□□□□□ -1.48
VPS38YLR360W CIC1P38779 376 aaKnown RBP5.81□□□□□ -1.48
VPS38YLR360W GLO4Q12320 285 aa5.81□□□□□ -1.48
VPS38YLR360W YPR053CQ6Q5F3 151 aa5.81□□□□□ -1.48
VPS38YLR360W TY4B-PA0A0B7P3V8 1104 aa5.8□□□□□ -1.48
VPS38YLR360W GCD6P32501 712 aaKnown RBP5.8□□□□□ -1.48
VPS38YLR360W RRM3P38766 723 aa5.8□□□□□ -1.48
VPS38YLR360W LSB6P42951 607 aa5.8□□□□□ -1.48
VPS38YLR360W YNR065CP53751 1116 aa5.8□□□□□ -1.48
VPS38YLR360W TY4A-HQ6Q5P6 413 aa5.8□□□□□ -1.48
VPS38YLR360W PHO4P07270 312 aaKnown RBP5.79□□□□□ -1.48
VPS38YLR360W DUR3P33413 735 aa5.79□□□□□ -1.48
VPS38YLR360W LEM3P42838 414 aa5.79□□□□□ -1.48
VPS38YLR360W MON1P53129 644 aa5.79□□□□□ -1.48
VPS38YLR360W SAC7P17121 654 aa5.78□□□□□ -1.48
VPS38YLR360W PAN5P38787 379 aa5.78□□□□□ -1.48
VPS38YLR360W FET4P40988 552 aa5.78□□□□□ -1.48
VPS38YLR360W PRY1P47032 299 aa5.78□□□□□ -1.48
VPS38YLR360W GAS5Q08193 484 aa5.78□□□□□ -1.48
VPS38YLR360W NPR1P22211 790 aa5.77□□□□□ -1.49
VPS38YLR360W HEM3P28789 327 aa5.77□□□□□ -1.49
VPS38YLR360W VPS35P34110 944 aa5.77□□□□□ -1.49
VPS38YLR360W AMN1P38285 549 aaPredicted RBP5.77□□□□□ -1.49
VPS38YLR360W SLN1P39928 1220 aaPredicted RBP5.77□□□□□ -1.49
VPS38YLR360W DAK2P43550 591 aa5.77□□□□□ -1.49
VPS38YLR360W CCT8P47079 568 aaKnown RBP5.77□□□□□ -1.49
VPS38YLR360W NUT1P53114 1132 aa5.77□□□□□ -1.49
VPS38YLR360W YCS4Q06156 1176 aa5.77□□□□□ -1.49
VPS38YLR360W MCM5P29496 775 aaKnown RBP5.76□□□□□ -1.49
VPS38YLR360W RPT1P33299 467 aaKnown RBP5.76□□□□□ -1.49
VPS38YLR360W POL32P47110 350 aa5.76□□□□□ -1.49
VPS38YLR360W BUD9P53226 547 aa5.76□□□□□ -1.49
VPS38YLR360W HAS1Q03532 505 aaKnown RBP5.76□□□□□ -1.49
VPS38YLR360W SPO71Q03868 1245 aa5.76□□□□□ -1.49
VPS38YLR360W OXR1Q08952 273 aa5.76□□□□□ -1.49
VPS38YLR360W YDR215CQ12240 137 aa5.76□□□□□ -1.49
VPS38YLR360W CMR1Q12510 522 aaKnown RBP5.76□□□□□ -1.49
VPS38YLR360W HVG1P0CE11 249 aa5.75□□□□□ -1.49
VPS38YLR360W YCK2P23292 546 aaKnown RBP5.75□□□□□ -1.49
VPS38YLR360W TAT1P38085 619 aa5.75□□□□□ -1.49
VPS38YLR360W RIM11P38615 370 aa5.75□□□□□ -1.49
VPS38YLR360W DSE4P53753 1117 aa5.75□□□□□ -1.49
VPS38YLR360W MSH6Q03834 1242 aa5.75□□□□□ -1.49
VPS38YLR360W DAL4Q04895 635 aa5.75□□□□□ -1.49
VPS38YLR360W PMT7Q06644 662 aa5.75□□□□□ -1.49
VPS38YLR360W SKN7P38889 622 aa5.74□□□□□ -1.49
VPS38YLR360W RVS167P39743 482 aaKnown RBP5.74□□□□□ -1.49
VPS38YLR360W MGE1P38523 228 aa5.74□□□□□ -1.49
VPS38YLR360W POL5P39985 1022 aaKnown RBP5.74□□□□□ -1.49
VPS38YLR360W MAE1P36013 669 aaKnown RBP5.73□□□□□ -1.49
VPS38YLR360W YAF9P53930 226 aa5.73□□□□□ -1.49
VPS38YLR360W YMR074CQ04773 145 aa5.73□□□□□ -1.49
VPS38YLR360W MCA1Q08601 432 aa5.73□□□□□ -1.49
VPS38YLR360W ELG1Q12050 791 aa5.73□□□□□ -1.49
VPS38YLR360W ATE1P16639 503 aa5.72□□□□□ -1.49
VPS38YLR360W PRP5P21372 849 aaPredicted RBP5.72□□□□□ -1.49
VPS38YLR360W PRP40P33203 583 aaKnown RBP5.72□□□□□ -1.49
VPS38YLR360W SAP155P43612 1002 aa5.72□□□□□ -1.49
VPS38YLR360W AI3P03877 415 aa5.71□□□□□ -1.5
VPS38YLR360W HTS1P07263 546 aaKnown RBP5.71□□□□□ -1.5
VPS38YLR360W KAR2P16474 682 aaKnown RBP5.71□□□□□ -1.5
VPS38YLR360W ERS1P17261 260 aa5.71□□□□□ -1.5
VPS38YLR360W SFA1P32771 386 aa5.71□□□□□ -1.5
VPS38YLR360W FAR11P53917 953 aa5.71□□□□□ -1.5
VPS38YLR360W TOS4Q06266 489 aa5.71□□□□□ -1.5
VPS38YLR360W TY1A-NL1Q12391 440 aaKnown RBP5.71□□□□□ -1.5
VPS38YLR360W RSC6P25632 483 aa5.7□□□□□ -1.5
VPS38YLR360W UGA4P32837 571 aa5.7□□□□□ -1.5
VPS38YLR360W UTP22P53254 1237 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms