RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W TRM3Q07527 1436 aa1.78□□□□□ -2.12
PRP16YKR086W DUR3P33413 735 aa1.78□□□□□ -2.12
PRP16YKR086W LSB3P43603 459 aaKnown RBP1.78□□□□□ -2.12
PRP16YKR086W BPT1P14772 1559 aa1.78□□□□□ -2.13
PRP16YKR086W TRL1P09880 827 aaKnown RBP1.78□□□□□ -2.13
PRP16YKR086W GEF1P37020 779 aa1.78□□□□□ -2.13
PRP16YKR086W HEH2Q03281 663 aa1.78□□□□□ -2.13
PRP16YKR086W LSO1Q3E827 93 aa1.78□□□□□ -2.13
PRP16YKR086W DNF2Q12675 1612 aa1.77□□□□□ -2.13
PRP16YKR086W XRN1P22147 1528 aaKnown RBP1.77□□□□□ -2.13
PRP16YKR086W YBR287WP38355 427 aa1.77□□□□□ -2.13
PRP16YKR086W YIL165CP40446 119 aa1.77□□□□□ -2.13
PRP16YKR086W RPB10P22139 70 aa1.77□□□□□ -2.13
PRP16YKR086W PGM2P37012 569 aaKnown RBP1.77□□□□□ -2.13
PRP16YKR086W SEA4P38164 1038 aa1.77□□□□□ -2.13
PRP16YKR086W ALD3P54114 506 aa1.77□□□□□ -2.13
PRP16YKR086W YPR053CQ6Q5F3 151 aa1.77□□□□□ -2.13
PRP16YKR086W TY1B-NL2Q99337 1749 aaKnown RBP1.76□□□□□ -2.13
PRP16YKR086W AI3P03877 415 aa1.76□□□□□ -2.13
PRP16YKR086W PRY1P47032 299 aa1.76□□□□□ -2.13
PRP16YKR086W NCE103P53615 221 aa1.76□□□□□ -2.13
PRP16YKR086W PNP1Q05788 311 aa1.76□□□□□ -2.13
PRP16YKR086W SRS2P12954 1174 aa1.76□□□□□ -2.13
PRP16YKR086W BIO5P53744 561 aaKnown RBP1.76□□□□□ -2.13
PRP16YKR086W YMR074CQ04773 145 aa1.76□□□□□ -2.13
PRP16YKR086W GAS5Q08193 484 aa1.76□□□□□ -2.13
PRP16YKR086W YBL113CQ7M4S9 792 aa1.76□□□□□ -2.13
PRP16YKR086W AIM44Q99299 758 aa1.76□□□□□ -2.13
PRP16YKR086W DOP1Q03921 1698 aa1.76□□□□□ -2.13
PRP16YKR086W RPO31P04051 1460 aa1.76□□□□□ -2.13
PRP16YKR086W LDH1P38139 375 aa1.76□□□□□ -2.13
PRP16YKR086W GIP1P38229 639 aa1.76□□□□□ -2.13
PRP16YKR086W INP52P50942 1183 aa1.76□□□□□ -2.13
PRP16YKR086W GPI13Q07830 1017 aa1.76□□□□□ -2.13
PRP16YKR086W PUS1Q12211 544 aaKnown RBP1.76□□□□□ -2.13
PRP16YKR086W TY1A-NL1Q12391 440 aaKnown RBP1.76□□□□□ -2.13
PRP16YKR086W PDR15Q04182 1529 aaKnown RBP1.76□□□□□ -2.13
PRP16YKR086W DNF3Q12674 1656 aa1.75□□□□□ -2.13
PRP16YKR086W TY4B-PA0A0B7P3V8 1104 aa1.75□□□□□ -2.13
PRP16YKR086W PRE9P23638 258 aaKnown RBP1.75□□□□□ -2.13
PRP16YKR086W YNR014WP53719 212 aa1.75□□□□□ -2.13
PRP16YKR086W YMR187CQ03236 431 aa1.75□□□□□ -2.13
PRP16YKR086W TY4A-HQ6Q5P6 413 aa1.75□□□□□ -2.13
PRP16YKR086W BOI2P39969 1040 aa1.75□□□□□ -2.13
PRP16YKR086W NTA1P40354 457 aa1.75□□□□□ -2.13
PRP16YKR086W INP51P40559 946 aaKnown RBP1.75□□□□□ -2.13
PRP16YKR086W CWC24P53769 259 aa1.75□□□□□ -2.13
PRP16YKR086W TIF6Q12522 245 aaKnown RBP1.75□□□□□ -2.13
PRP16YKR086W TY1B-BRQ12193 1756 aa1.75□□□□□ -2.13
PRP16YKR086W TY1B-GR3Q12316 1755 aa1.75□□□□□ -2.13
PRP16YKR086W TY1B-ORQ92393 1755 aa1.75□□□□□ -2.13
PRP16YKR086W SSN2P38931 1420 aa1.74□□□□□ -2.13
PRP16YKR086W PRP5P21372 849 aaPredicted RBP1.74□□□□□ -2.13
PRP16YKR086W POL5P39985 1022 aaKnown RBP1.74□□□□□ -2.13
PRP16YKR086W SGS1P35187 1447 aa1.74□□□□□ -2.13
PRP16YKR086W YHL008CP38750 627 aa1.74□□□□□ -2.13
PRP16YKR086W YNR065CP53751 1116 aa1.74□□□□□ -2.13
PRP16YKR086W SOG2Q08817 791 aa1.74□□□□□ -2.13
PRP16YKR086W BUD3P25558 1636 aa1.74□□□□□ -2.13
PRP16YKR086W ISW1P38144 1129 aa1.74□□□□□ -2.13
PRP16YKR086W NCL1P38205 684 aaKnown RBP1.74□□□□□ -2.13
PRP16YKR086W RIM11P38615 370 aa1.74□□□□□ -2.13
PRP16YKR086W DYS1P38791 387 aa1.74□□□□□ -2.13
PRP16YKR086W CTH1P47976 325 aa1.74□□□□□ -2.13
PRP16YKR086W RSC4Q02206 625 aa1.74□□□□□ -2.13
PRP16YKR086W SLP1Q12232 587 aa1.74□□□□□ -2.13
PRP16YKR086W GEA2P39993 1459 aaKnown RBP1.73□□□□□ -2.13
PRP16YKR086W HXT8P40886 569 aa1.73□□□□□ -2.13
PRP16YKR086W LSB6P42951 607 aa1.73□□□□□ -2.13
PRP16YKR086W SAP155P43612 1002 aa1.73□□□□□ -2.13
PRP16YKR086W YPL034WQ03083 165 aa1.73□□□□□ -2.13
PRP16YKR086W GLO4Q12320 285 aa1.73□□□□□ -2.13
PRP16YKR086W NHA1Q99271 985 aa1.73□□□□□ -2.13
PRP16YKR086W MDJ2P42834 146 aa1.73□□□□□ -2.13
PRP16YKR086W ARI1P53111 347 aaKnown RBP1.73□□□□□ -2.13
PRP16YKR086W TOS4Q06266 489 aa1.73□□□□□ -2.13
PRP16YKR086W SPO14P36126 1683 aa1.73□□□□□ -2.13
PRP16YKR086W SFA1P32771 386 aa1.72□□□□□ -2.13
PRP16YKR086W YML020WQ03722 664 aa1.72□□□□□ -2.13
PRP16YKR086W FRT1Q99332 602 aa1.72□□□□□ -2.13
PRP16YKR086W FUS1P11710 512 aa1.72□□□□□ -2.13
PRP16YKR086W PYC2P32327 1180 aaKnown RBP1.72□□□□□ -2.13
PRP16YKR086W YKR073CP36153 106 aa1.72□□□□□ -2.13
PRP16YKR086W ALG14P38242 237 aa1.72□□□□□ -2.13
PRP16YKR086W NEO1P40527 1151 aa1.72□□□□□ -2.13
PRP16YKR086W PPT1P53043 513 aa1.72□□□□□ -2.13
PRP16YKR086W CMR1Q12510 522 aaKnown RBP1.72□□□□□ -2.13
PRP16YKR086W TRP3P00937 484 aa1.72□□□□□ -2.13
PRP16YKR086W RPP1AP05318 106 aaPredicted RBP1.72□□□□□ -2.13
PRP16YKR086W RRM3P38766 723 aa1.72□□□□□ -2.13
PRP16YKR086W GIP2P40036 548 aa1.72□□□□□ -2.13
PRP16YKR086W PSY2P40164 858 aa1.72□□□□□ -2.13
PRP16YKR086W TED1P40533 473 aa1.72□□□□□ -2.13
PRP16YKR086W YJR124CP47159 448 aa1.72□□□□□ -2.13
PRP16YKR086W MSH6Q03834 1242 aa1.72□□□□□ -2.13
PRP16YKR086W ULS1Q08562 1619 aa1.72□□□□□ -2.13
PRP16YKR086W TY1B-HO13535 1793 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-DR5P0C2I2 1755 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-DR6P0C2I3 1755 aa1.71□□□□□ -2.14
PRP16YKR086W TY1B-LR2P0C2I5 1755 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms