RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A TRS120Q04183 1289 aa5.74□□□□□ -1.49
SFT1YKL006C-A TY4A-HQ6Q5P6 413 aa5.74□□□□□ -1.49
SFT1YKL006C-A SBP1P10080 294 aaKnown RBP5.73□□□□□ -1.49
SFT1YKL006C-A FUS1P11710 512 aa5.73□□□□□ -1.49
SFT1YKL006C-A MDJ2P42834 146 aa5.73□□□□□ -1.49
SFT1YKL006C-A GUP1P53154 560 aa5.73□□□□□ -1.49
SFT1YKL006C-A YNL011CP53980 444 aa5.73□□□□□ -1.49
SFT1YKL006C-A GAS5Q08193 484 aa5.73□□□□□ -1.49
SFT1YKL006C-A MCA1Q08601 432 aa5.73□□□□□ -1.49
SFT1YKL006C-A PYC2P32327 1180 aaKnown RBP5.72□□□□□ -1.49
SFT1YKL006C-A LSB6P42951 607 aa5.72□□□□□ -1.49
SFT1YKL006C-A SAC7P17121 654 aa5.71□□□□□ -1.5
SFT1YKL006C-A NEO1P40527 1151 aa5.71□□□□□ -1.5
SFT1YKL006C-A LEM3P42838 414 aa5.71□□□□□ -1.5
SFT1YKL006C-A DSE4P53753 1117 aa5.71□□□□□ -1.5
SFT1YKL006C-A ALD3P54114 506 aa5.71□□□□□ -1.5
SFT1YKL006C-A RSC4Q02206 625 aa5.71□□□□□ -1.5
SFT1YKL006C-A SOG2Q08817 791 aa5.71□□□□□ -1.5
SFT1YKL006C-A PAN5P38787 379 aa5.7□□□□□ -1.5
SFT1YKL006C-A YJR124CP47159 448 aa5.7□□□□□ -1.5
SFT1YKL006C-A TFA2P36145 328 aa5.69□□□□□ -1.5
SFT1YKL006C-A AMN1P38285 549 aaPredicted RBP5.69□□□□□ -1.5
SFT1YKL006C-A YPL034WQ03083 165 aa5.69□□□□□ -1.5
SFT1YKL006C-A BSC2Q05611 235 aa5.69□□□□□ -1.5
SFT1YKL006C-A AI3P03877 415 aa5.68□□□□□ -1.5
SFT1YKL006C-A RSC6P25632 483 aa5.68□□□□□ -1.5
SFT1YKL006C-A SFA1P32771 386 aa5.68□□□□□ -1.5
SFT1YKL006C-A YHL008CP38750 627 aa5.68□□□□□ -1.5
SFT1YKL006C-A YNR065CP53751 1116 aa5.68□□□□□ -1.5
SFT1YKL006C-A CDC55Q00362 526 aa5.68□□□□□ -1.5
SFT1YKL006C-A SPO71Q03868 1245 aa5.68□□□□□ -1.5
SFT1YKL006C-A NUT2Q06213 157 aa5.68□□□□□ -1.5
SFT1YKL006C-A MNL2Q12205 849 aa5.68□□□□□ -1.5
SFT1YKL006C-A GLO4Q12320 285 aa5.68□□□□□ -1.5
SFT1YKL006C-A CTR9P89105 1077 aa5.67□□□□□ -1.5
SFT1YKL006C-A FRT1Q99332 602 aa5.67□□□□□ -1.5
SFT1YKL006C-A MAE1P36013 669 aaKnown RBP5.66□□□□□ -1.5
SFT1YKL006C-A YHL050CP38721 697 aa5.66□□□□□ -1.5
SFT1YKL006C-A YHR219WP38900 624 aa5.66□□□□□ -1.5
SFT1YKL006C-A FET4P40988 552 aa5.66□□□□□ -1.5
SFT1YKL006C-A SSF1P38789 453 aaPredicted RBP5.65□□□□□ -1.5
SFT1YKL006C-A ARI1P53111 347 aaKnown RBP5.65□□□□□ -1.5
SFT1YKL006C-A TY1A-NL1Q12391 440 aaKnown RBP5.65□□□□□ -1.5
SFT1YKL006C-A COQ2P32378 372 aa5.64□□□□□ -1.51
SFT1YKL006C-A STM1P39015 273 aaKnown RBP5.64□□□□□ -1.51
SFT1YKL006C-A POL5P39985 1022 aaKnown RBP5.64□□□□□ -1.51
SFT1YKL006C-A SAM37P50110 327 aa5.64□□□□□ -1.51
SFT1YKL006C-A HAS1Q03532 505 aaKnown RBP5.64□□□□□ -1.51
SFT1YKL006C-A INP54Q08227 384 aaKnown RBP5.64□□□□□ -1.51
SFT1YKL006C-A THI12P42883 340 aa5.63□□□□□ -1.51
SFT1YKL006C-A THI5P43534 340 aa5.63□□□□□ -1.51
SFT1YKL006C-A THI11P47183 340 aa5.63□□□□□ -1.51
SFT1YKL006C-A YMR074CQ04773 145 aa5.63□□□□□ -1.51
SFT1YKL006C-A THI13Q07748 340 aa5.63□□□□□ -1.51
SFT1YKL006C-A GPI13Q07830 1017 aa5.63□□□□□ -1.51
SFT1YKL006C-A NOC3Q07896 663 aaPredicted RBP5.63□□□□□ -1.51
SFT1YKL006C-A ELG1Q12050 791 aa5.63□□□□□ -1.51
SFT1YKL006C-A COBP00163 385 aa5.62□□□□□ -1.51
SFT1YKL006C-A FLP1P03870 423 aa5.62□□□□□ -1.51
SFT1YKL006C-A HVG1P0CE11 249 aa5.62□□□□□ -1.51
SFT1YKL006C-A NPR1P22211 790 aa5.62□□□□□ -1.51
SFT1YKL006C-A FAR11P53917 953 aa5.62□□□□□ -1.51
SFT1YKL006C-A MSC6Q08818 692 aaKnown RBP5.61□□□□□ -1.51
SFT1YKL006C-A ERS1P17261 260 aa5.6□□□□□ -1.51
SFT1YKL006C-A DUR3P33413 735 aa5.6□□□□□ -1.51
SFT1YKL006C-A KIP3P53086 805 aaKnown RBP5.6□□□□□ -1.51
SFT1YKL006C-A MON1P53129 644 aa5.6□□□□□ -1.51
SFT1YKL006C-A CMR1Q12510 522 aaKnown RBP5.6□□□□□ -1.51
SFT1YKL006C-A GLT1Q12680 2145 aaKnown RBP5.59□□□□□ -1.51
SFT1YKL006C-A MCM5P29496 775 aaKnown RBP5.59□□□□□ -1.51
SFT1YKL006C-A NAM7P30771 971 aaKnown RBP5.59□□□□□ -1.51
SFT1YKL006C-A SLD2P34252 453 aa5.59□□□□□ -1.51
SFT1YKL006C-A RIM11P38615 370 aa5.59□□□□□ -1.51
SFT1YKL006C-A CIC1P38779 376 aaKnown RBP5.59□□□□□ -1.51
SFT1YKL006C-A AKR1P39010 764 aa5.59□□□□□ -1.51
SFT1YKL006C-A NUT1P53114 1132 aa5.59□□□□□ -1.51
SFT1YKL006C-A REC8Q12188 680 aa5.59□□□□□ -1.51
SFT1YKL006C-A YLL054CQ12244 843 aa5.59□□□□□ -1.51
SFT1YKL006C-A KAE1P36132 386 aa5.58□□□□□ -1.52
SFT1YKL006C-A RVS167P39743 482 aaKnown RBP5.58□□□□□ -1.52
SFT1YKL006C-A NCE103P53615 221 aa5.58□□□□□ -1.52
SFT1YKL006C-A ALO1P54783 526 aaKnown RBP5.58□□□□□ -1.52
SFT1YKL006C-A MSH6Q03834 1242 aa5.58□□□□□ -1.52
SFT1YKL006C-A PMT7Q06644 662 aa5.58□□□□□ -1.52
SFT1YKL006C-A HTS1P07263 546 aaKnown RBP5.57□□□□□ -1.52
SFT1YKL006C-A CHS2P14180 963 aa5.57□□□□□ -1.52
SFT1YKL006C-A SEC20P28791 383 aa5.57□□□□□ -1.52
SFT1YKL006C-A GCD6P32501 712 aaKnown RBP5.57□□□□□ -1.52
SFT1YKL006C-A SAF1P38352 637 aa5.57□□□□□ -1.52
SFT1YKL006C-A YCS4Q06156 1176 aa5.57□□□□□ -1.52
SFT1YKL006C-A PPX1P38698 397 aa5.56□□□□□ -1.52
SFT1YKL006C-A YAF9P53930 226 aa5.56□□□□□ -1.52
SFT1YKL006C-A PRP5P21372 849 aaPredicted RBP5.55□□□□□ -1.52
SFT1YKL006C-A PGM1P33401 570 aaKnown RBP5.55□□□□□ -1.52
SFT1YKL006C-A MAC1P35192 417 aa5.55□□□□□ -1.52
SFT1YKL006C-A YKL077WP36081 392 aa5.55□□□□□ -1.52
SFT1YKL006C-A IPL1P38991 367 aa5.55□□□□□ -1.52
SFT1YKL006C-A UTP22P53254 1237 aaPredicted RBP5.55□□□□□ -1.52
SFT1YKL006C-A GIC2Q06648 383 aa5.55□□□□□ -1.52
SFT1YKL006C-A PUF3Q07807 879 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms