RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W SAM3Q08986 587 aa4.52□□□□□ -1.69
NUP85YJR042W PAN1P32521 1480 aa4.51□□□□□ -1.69
NUP85YJR042W MFT1P33441 392 aaKnown RBP4.51□□□□□ -1.69
NUP85YJR042W GPP1P41277 250 aaKnown RBP4.51□□□□□ -1.69
NUP85YJR042W NTG2Q08214 380 aa4.51□□□□□ -1.69
NUP85YJR042W GAS4Q08271 471 aa4.51□□□□□ -1.69
NUP85YJR042W FLC1Q08967 793 aa4.51□□□□□ -1.69
NUP85YJR042W CDC25P04821 1589 aa4.51□□□□□ -1.69
NUP85YJR042W TY3B-GQ99315 1547 aa4.51□□□□□ -1.69
NUP85YJR042W SNT2P53127 1403 aa4.51□□□□□ -1.69
NUP85YJR042W YKL222CP35995 705 aa4.5□□□□□ -1.69
NUP85YJR042W YAP5P40574 245 aa4.5□□□□□ -1.69
NUP85YJR042W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
NUP85YJR042W VNX1P42839 908 aa4.5□□□□□ -1.69
NUP85YJR042W MAL11P53048 616 aa4.5□□□□□ -1.69
NUP85YJR042W ESC2Q06340 456 aa4.5□□□□□ -1.69
NUP85YJR042W ATG13Q06628 738 aa4.5□□□□□ -1.69
NUP85YJR042W CDC73Q06697 393 aa4.5□□□□□ -1.69
NUP85YJR042W YLR125WQ12138 136 aa4.5□□□□□ -1.69
NUP85YJR042W TSC13Q99190 310 aa4.5□□□□□ -1.69
NUP85YJR042W YBT1P32386 1661 aa4.5□□□□□ -1.69
NUP85YJR042W ESC1Q03661 1658 aaKnown RBP4.5□□□□□ -1.69
NUP85YJR042W PEP7P32609 515 aa4.5□□□□□ -1.69
NUP85YJR042W TIM54P47045 478 aa4.5□□□□□ -1.69
NUP85YJR042W OPI10Q08202 246 aa4.5□□□□□ -1.69
NUP85YJR042W VPS5Q92331 675 aa4.5□□□□□ -1.69
NUP85YJR042W PDI1P17967 522 aaKnown RBP4.49□□□□□ -1.69
NUP85YJR042W THI4P32318 326 aa4.49□□□□□ -1.69
NUP85YJR042W HIR1P32479 840 aa4.49□□□□□ -1.69
NUP85YJR042W RKM3P38222 552 aa4.49□□□□□ -1.69
NUP85YJR042W SOH1P38633 127 aa4.49□□□□□ -1.69
NUP85YJR042W YNL034WP53963 612 aa4.49□□□□□ -1.69
NUP85YJR042W YNL018CP53976 612 aa4.49□□□□□ -1.69
NUP85YJR042W RRI2Q12348 645 aa4.49□□□□□ -1.69
NUP85YJR042W CDC34P14682 295 aa4.49□□□□□ -1.69
NUP85YJR042W CHZ1P40019 153 aaPredicted RBP4.49□□□□□ -1.69
NUP85YJR042W BNA1P47096 177 aa4.49□□□□□ -1.69
NUP85YJR042W YNL115CP53925 644 aa4.49□□□□□ -1.69
NUP85YJR042W COG6P53959 839 aa4.49□□□□□ -1.69
NUP85YJR042W AI4P03878 556 aa4.48□□□□□ -1.69
NUP85YJR042W CAN1P04817 590 aa4.48□□□□□ -1.69
NUP85YJR042W FIG4P42837 879 aa4.48□□□□□ -1.69
NUP85YJR042W MEH1Q02205 184 aa4.48□□□□□ -1.69
NUP85YJR042W SRF1Q12516 437 aa4.48□□□□□ -1.69
NUP85YJR042W IRC20Q06554 1556 aa4.48□□□□□ -1.69
NUP85YJR042W CCP1P00431 361 aa4.48□□□□□ -1.69
NUP85YJR042W ATP4P05626 244 aa4.48□□□□□ -1.69
NUP85YJR042W PUF4P25339 888 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
NUP85YJR042W YBR197CP38306 217 aa4.48□□□□□ -1.69
NUP85YJR042W MPP10P47083 593 aaKnown RBP4.48□□□□□ -1.69
NUP85YJR042W CAB1Q04430 367 aa4.48□□□□□ -1.69
NUP85YJR042W OPI1P21957 404 aa4.47□□□□□ -1.69
NUP85YJR042W MSH2P25847 964 aa4.47□□□□□ -1.69
NUP85YJR042W NSR1P27476 414 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
NUP85YJR042W EXO84P38261 753 aa4.47□□□□□ -1.69
NUP85YJR042W NMD3P38861 518 aaKnown RBP4.47□□□□□ -1.69
NUP85YJR042W PES4P39684 611 aa4.47□□□□□ -1.69
NUP85YJR042W RTA1P53047 317 aa4.47□□□□□ -1.69
NUP85YJR042W MDM1Q01846 1127 aa4.47□□□□□ -1.69
NUP85YJR042W NAN1Q02931 896 aaKnown RBP4.47□□□□□ -1.69
NUP85YJR042W GRX3Q03835 250 aa4.47□□□□□ -1.69
NUP85YJR042W AGE1Q04412 482 aa4.47□□□□□ -1.69
NUP85YJR042W TDA5Q06417 326 aaKnown RBP4.47□□□□□ -1.69
NUP85YJR042W TUM1Q08686 304 aaKnown RBP4.47□□□□□ -1.69
NUP85YJR042W CAT8P39113 1433 aa4.47□□□□□ -1.69
NUP85YJR042W RPO21P04050 1733 aaKnown RBP4.46□□□□□ -1.69
NUP85YJR042W NPR1P22211 790 aa4.46□□□□□ -1.69
NUP85YJR042W UBP1P25037 809 aa4.46□□□□□ -1.69
NUP85YJR042W NIT1P40447 199 aa4.46□□□□□ -1.69
NUP85YJR042W PFD1P46988 109 aa4.46□□□□□ -1.69
NUP85YJR042W CWC24P53769 259 aa4.46□□□□□ -1.69
NUP85YJR042W UTP13Q05946 817 aaKnown RBP4.46□□□□□ -1.69
NUP85YJR042W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.46□□□□□ -1.69not detected
NUP85YJR042W TFB4Q12004 338 aa4.46□□□□□ -1.69
NUP85YJR042W NHA1Q99271 985 aa4.46□□□□□ -1.69
NUP85YJR042W VPS15P22219 1454 aa4.46□□□□□ -1.69
NUP85YJR042W FOB1O13329 566 aa4.46□□□□□ -1.7
NUP85YJR042W CYT1P07143 309 aa4.46□□□□□ -1.7
NUP85YJR042W APA1P16550 321 aaKnown RBP4.46□□□□□ -1.7
NUP85YJR042W VPS35P34110 944 aa4.46□□□□□ -1.7
NUP85YJR042W SPR3P41901 512 aa4.46□□□□□ -1.7
NUP85YJR042W IES1P43579 692 aa4.46□□□□□ -1.7
NUP85YJR042W PUS6P53294 404 aa4.46□□□□□ -1.7
NUP85YJR042W EEB1Q02891 456 aa4.46□□□□□ -1.7
NUP85YJR042W MPD2Q99316 277 aa4.46□□□□□ -1.7
NUP85YJR042W GEA2P39993 1459 aaKnown RBP4.46□□□□□ -1.7
NUP85YJR042W NTE1Q04958 1679 aa4.46□□□□□ -1.7
NUP85YJR042W MRF1P30775 413 aaPredicted RBP4.45□□□□□ -1.7
NUP85YJR042W STR2P47164 639 aa4.45□□□□□ -1.7
NUP85YJR042W PSR1Q07800 427 aa4.45□□□□□ -1.7
NUP85YJR042W YOL087CQ99247 1116 aa4.45□□□□□ -1.7
NUP85YJR042W PDR10P51533 1564 aa4.45□□□□□ -1.7
NUP85YJR042W PGI1P12709 554 aaKnown RBP4.45□□□□□ -1.7
NUP85YJR042W KEX2P13134 814 aa4.45□□□□□ -1.7
NUP85YJR042W VAN1P23642 535 aa4.45□□□□□ -1.7
NUP85YJR042W MKK2P32491 506 aa4.45□□□□□ -1.7
NUP85YJR042W UGA4P32837 571 aa4.45□□□□□ -1.7
NUP85YJR042W MTC2P34246 357 aa4.45□□□□□ -1.7
NUP85YJR042W BET3P36149 193 aa4.45□□□□□ -1.7
NUP85YJR042W RRP8P38961 392 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms