RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C FRT1Q99332 602 aa5.52□□□□□ -1.53
ATG27YJL178C GIP2P40036 548 aa5.51□□□□□ -1.53
ATG27YJL178C CTR9P89105 1077 aa5.51□□□□□ -1.53
ATG27YJL178C GAS5Q08193 484 aa5.51□□□□□ -1.53
ATG27YJL178C MCA1Q08601 432 aa5.51□□□□□ -1.53
ATG27YJL178C TY4B-PA0A0B7P3V8 1104 aa5.5□□□□□ -1.53
ATG27YJL178C YHL050CP38721 697 aa5.5□□□□□ -1.53
ATG27YJL178C RRM3P38766 723 aa5.5□□□□□ -1.53
ATG27YJL178C YHR219WP38900 624 aa5.5□□□□□ -1.53
ATG27YJL178C TED1P40533 473 aa5.5□□□□□ -1.53
ATG27YJL178C RSC4Q02206 625 aa5.5□□□□□ -1.53
ATG27YJL178C TRS120Q04183 1289 aa5.5□□□□□ -1.53
ATG27YJL178C NUT2Q06213 157 aa5.5□□□□□ -1.53
ATG27YJL178C SOG2Q08817 791 aa5.5□□□□□ -1.53
ATG27YJL178C SLP1Q12232 587 aa5.5□□□□□ -1.53
ATG27YJL178C TY4A-HQ6Q5P6 413 aa5.5□□□□□ -1.53
ATG27YJL178C FUS1P11710 512 aa5.49□□□□□ -1.53
ATG27YJL178C PYC2P32327 1180 aaKnown RBP5.49□□□□□ -1.53
ATG27YJL178C AMN1P38285 549 aaPredicted RBP5.49□□□□□ -1.53
ATG27YJL178C SEN54Q02825 467 aaPredicted RBP5.49□□□□□ -1.53
ATG27YJL178C COBP00163 385 aa5.48□□□□□ -1.53
ATG27YJL178C HVG1P0CE11 249 aa5.48□□□□□ -1.53
ATG27YJL178C IPL1P38991 367 aa5.48□□□□□ -1.53
ATG27YJL178C NRD1P53617 575 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53 RIP-Chip
ATG27YJL178C GLO4Q12320 285 aa5.48□□□□□ -1.53
ATG27YJL178C AI3P03877 415 aa5.47□□□□□ -1.53
ATG27YJL178C DUR3P33413 735 aa5.47□□□□□ -1.53
ATG27YJL178C TAT1P38085 619 aa5.47□□□□□ -1.53
ATG27YJL178C STM1P39015 273 aaKnown RBP5.47□□□□□ -1.53
ATG27YJL178C GPI13Q07830 1017 aa5.47□□□□□ -1.53
ATG27YJL178C MSC6Q08818 692 aaKnown RBP5.47□□□□□ -1.53
ATG27YJL178C SLD2P34252 453 aa5.46□□□□□ -1.54
ATG27YJL178C PAN5P38787 379 aa5.46□□□□□ -1.54
ATG27YJL178C GUP1P53154 560 aa5.46□□□□□ -1.54
ATG27YJL178C YNR065CP53751 1116 aa5.46□□□□□ -1.54
ATG27YJL178C LSB6P42951 607 aa5.45□□□□□ -1.54
ATG27YJL178C YJR124CP47159 448 aa5.45□□□□□ -1.54
ATG27YJL178C YNL011CP53980 444 aa5.45□□□□□ -1.54
ATG27YJL178C CDC55Q00362 526 aa5.45□□□□□ -1.54
ATG27YJL178C SFA1P32771 386 aa5.44□□□□□ -1.54
ATG27YJL178C YPL034WQ03083 165 aa5.44□□□□□ -1.54
ATG27YJL178C TY1A-NL1Q12391 440 aaKnown RBP5.44□□□□□ -1.54
ATG27YJL178C SAC7P17121 654 aa5.43□□□□□ -1.54
ATG27YJL178C POL5P39985 1022 aaKnown RBP5.43□□□□□ -1.54
ATG27YJL178C LEM3P42838 414 aa5.43□□□□□ -1.54
ATG27YJL178C THI12P42883 340 aa5.43□□□□□ -1.54
ATG27YJL178C THI5P43534 340 aa5.43□□□□□ -1.54
ATG27YJL178C THI11P47183 340 aa5.43□□□□□ -1.54
ATG27YJL178C BSC2Q05611 235 aa5.43□□□□□ -1.54
ATG27YJL178C THI13Q07748 340 aa5.43□□□□□ -1.54
ATG27YJL178C WHI5Q12416 295 aa5.43□□□□□ -1.54
ATG27YJL178C PGM1P33401 570 aaKnown RBP5.42□□□□□ -1.54
ATG27YJL178C RIM11P38615 370 aa5.42□□□□□ -1.54
ATG27YJL178C PPX1P38698 397 aa5.42□□□□□ -1.54
ATG27YJL178C ARI1P53111 347 aaKnown RBP5.42□□□□□ -1.54
ATG27YJL178C HAS1Q03532 505 aaKnown RBP5.42□□□□□ -1.54
ATG27YJL178C SEC20P28791 383 aa5.41□□□□□ -1.54
ATG27YJL178C CMR1Q12510 522 aaKnown RBP5.41□□□□□ -1.54
ATG27YJL178C FLP1P03870 423 aa5.4□□□□□ -1.54
ATG27YJL178C MET4P32389 672 aa5.4□□□□□ -1.54
ATG27YJL178C ECM2P38241 364 aaKnown RBP5.4□□□□□ -1.54
ATG27YJL178C NEO1P40527 1151 aa5.4□□□□□ -1.54
ATG27YJL178C SAM37P50110 327 aa5.4□□□□□ -1.54
ATG27YJL178C DSE4P53753 1117 aa5.4□□□□□ -1.54
ATG27YJL178C MSH6Q03834 1242 aa5.4□□□□□ -1.54
ATG27YJL178C PRP5P21372 849 aaPredicted RBP5.39□□□□□ -1.55
ATG27YJL178C NPR1P22211 790 aa5.39□□□□□ -1.55
ATG27YJL178C SPO71Q03868 1245 aa5.39□□□□□ -1.55
ATG27YJL178C ERS1P17261 260 aa5.38□□□□□ -1.55
ATG27YJL178C YHL008CP38750 627 aa5.38□□□□□ -1.55
ATG27YJL178C FET4P40988 552 aa5.38□□□□□ -1.55
ATG27YJL178C ELG1Q12050 791 aa5.38□□□□□ -1.55
ATG27YJL178C RSC6P25632 483 aa5.37□□□□□ -1.55
ATG27YJL178C CIC1P38779 376 aaKnown RBP5.37□□□□□ -1.55
ATG27YJL178C SAP155P43612 1002 aa5.37□□□□□ -1.55
ATG27YJL178C NOC3Q07896 663 aaPredicted RBP5.37□□□□□ -1.55
ATG27YJL178C INP54Q08227 384 aaKnown RBP5.37□□□□□ -1.55
ATG27YJL178C REC8Q12188 680 aa5.37□□□□□ -1.55
ATG27YJL178C HEM3P28789 327 aa5.36□□□□□ -1.55
ATG27YJL178C GCD6P32501 712 aaKnown RBP5.36□□□□□ -1.55
ATG27YJL178C MAE1P36013 669 aaKnown RBP5.36□□□□□ -1.55
ATG27YJL178C NUT1P53114 1132 aa5.36□□□□□ -1.55
ATG27YJL178C NCE103P53615 221 aa5.36□□□□□ -1.55
ATG27YJL178C HTS1P07263 546 aaKnown RBP5.35□□□□□ -1.55
ATG27YJL178C PHO4P07270 312 aaKnown RBP5.35□□□□□ -1.55
ATG27YJL178C SBP1P10080 294 aaKnown RBP5.35□□□□□ -1.55
ATG27YJL178C ATE1P16639 503 aa5.35□□□□□ -1.55
ATG27YJL178C NAM7P30771 971 aaKnown RBP5.34□□□□□ -1.55
ATG27YJL178C VPS35P34110 944 aa5.34□□□□□ -1.55
ATG27YJL178C POL32P47110 350 aa5.34□□□□□ -1.55
ATG27YJL178C KIP3P53086 805 aaKnown RBP5.34□□□□□ -1.55
ATG27YJL178C PMT7Q06644 662 aa5.34□□□□□ -1.55
ATG27YJL178C DAK2P43550 591 aa5.33□□□□□ -1.56
ATG27YJL178C YAF9P53930 226 aa5.33□□□□□ -1.56
ATG27YJL178C YLR122CQ12312 125 aa5.33□□□□□ -1.56
ATG27YJL178C SAF1P38352 637 aa5.32□□□□□ -1.56
ATG27YJL178C AKR1P39010 764 aa5.32□□□□□ -1.56
ATG27YJL178C MON1P53129 644 aa5.32□□□□□ -1.56
ATG27YJL178C YCS4Q06156 1176 aa5.32□□□□□ -1.56
ATG27YJL178C TOS4Q06266 489 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms