RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W NCE103P53615 221 aa5.51□□□□□ -1.53
PEP8YJL053W GIC2Q06648 383 aa5.5□□□□□ -1.53
PEP8YJL053W NSI1Q12457 570 aa5.5□□□□□ -1.53
PEP8YJL053W YCR015CP25616 317 aa5.49□□□□□ -1.53
PEP8YJL053W SPO71Q03868 1245 aa5.49□□□□□ -1.53
PEP8YJL053W DFG16Q99234 619 aa5.49□□□□□ -1.53
PEP8YJL053W SEA4P38164 1038 aa5.48□□□□□ -1.53
PEP8YJL053W POL5P39985 1022 aaKnown RBP5.48□□□□□ -1.53
PEP8YJL053W GAS1P22146 559 aaKnown RBP5.47□□□□□ -1.53
PEP8YJL053W FIR1P40020 876 aa5.47□□□□□ -1.53
PEP8YJL053W BIO5P53744 561 aaKnown RBP5.47□□□□□ -1.53
PEP8YJL053W ELG1Q12050 791 aa5.47□□□□□ -1.53
PEP8YJL053W GCD1P09032 578 aaPredicted RBP5.46□□□□□ -1.54
PEP8YJL053W ECM23Q02710 187 aa5.46□□□□□ -1.54
PEP8YJL053W SOG2Q08817 791 aa5.46□□□□□ -1.54
PEP8YJL053W SUV3P32580 737 aa5.45□□□□□ -1.54
PEP8YJL053W YBR197CP38306 217 aa5.45□□□□□ -1.54
PEP8YJL053W NEO1P40527 1151 aa5.45□□□□□ -1.54
PEP8YJL053W MSN1P22148 382 aa5.44□□□□□ -1.54
PEP8YJL053W KIP3P53086 805 aaKnown RBP5.44□□□□□ -1.54
PEP8YJL053W EMG1Q06287 252 aaKnown RBP5.44□□□□□ -1.54
PEP8YJL053W ESC8Q08119 714 aa5.44□□□□□ -1.54
PEP8YJL053W AIM46P38885 310 aa5.43□□□□□ -1.54
PEP8YJL053W MMM1P41800 426 aa5.43□□□□□ -1.54
PEP8YJL053W FUS1P11710 512 aa5.42□□□□□ -1.54
PEP8YJL053W ERS1P17261 260 aa5.41□□□□□ -1.54
PEP8YJL053W ISC10P32645 267 aa5.41□□□□□ -1.54
PEP8YJL053W TFA2P36145 328 aa5.41□□□□□ -1.54
PEP8YJL053W TGL4P36165 910 aa5.41□□□□□ -1.54
PEP8YJL053W UBX7P38349 436 aa5.41□□□□□ -1.54
PEP8YJL053W YHL008CP38750 627 aa5.41□□□□□ -1.54
PEP8YJL053W FAR11P53917 953 aa5.41□□□□□ -1.54
PEP8YJL053W CIT3P43635 486 aa5.4□□□□□ -1.54
PEP8YJL053W ALD3P54114 506 aa5.4□□□□□ -1.54
PEP8YJL053W GIP4P39732 760 aa5.39□□□□□ -1.55
PEP8YJL053W YMR074CQ04773 145 aa5.39□□□□□ -1.55
PEP8YJL053W WHI3P34761 661 aaKnown RBP5.38□□□□□ -1.55
PEP8YJL053W ALD4P46367 519 aaKnown RBP5.38□□□□□ -1.55
PEP8YJL053W HSP78P33416 811 aa5.37□□□□□ -1.55
PEP8YJL053W HXT8P40886 569 aa5.37□□□□□ -1.55
PEP8YJL053W YJR124CP47159 448 aa5.37□□□□□ -1.55
PEP8YJL053W RCM1P53972 490 aa5.37□□□□□ -1.55
PEP8YJL053W YOR059CQ08448 450 aaKnown RBP5.37□□□□□ -1.55
PEP8YJL053W YNR065CP53751 1116 aa5.36□□□□□ -1.55
PEP8YJL053W YOR223WQ12015 292 aa5.36□□□□□ -1.55
PEP8YJL053W BOI1P38041 980 aaKnown RBP5.35□□□□□ -1.55
PEP8YJL053W TAF1P46677 1066 aa5.35□□□□□ -1.55
PEP8YJL053W PUN1Q06991 263 aa5.35□□□□□ -1.55
PEP8YJL053W HAS1Q03532 505 aaKnown RBP5.34□□□□□ -1.55
PEP8YJL053W GPT2P36148 743 aa5.33□□□□□ -1.56
PEP8YJL053W GIS1Q03833 894 aa5.33□□□□□ -1.56
PEP8YJL053W MSH6Q03834 1242 aa5.33□□□□□ -1.56
PEP8YJL053W YLL054CQ12244 843 aa5.33□□□□□ -1.56
PEP8YJL053W FET4P40988 552 aa5.32□□□□□ -1.56
PEP8YJL053W CDA2Q06703 312 aa5.32□□□□□ -1.56
PEP8YJL053W ADP1P25371 1049 aa5.31□□□□□ -1.56
PEP8YJL053W PUF6Q04373 656 aaKnown RBP5.3□□□□□ -1.56
PEP8YJL053W TSA1P34760 196 aaKnown RBP5.29□□□□□ -1.56
PEP8YJL053W RGD2P43556 714 aa5.29□□□□□ -1.56
PEP8YJL053W DOT1Q04089 582 aaKnown RBP5.29□□□□□ -1.56
PEP8YJL053W TTI1P36097 1038 aa5.28□□□□□ -1.56
PEP8YJL053W SUT1P53032 299 aaKnown RBP5.28□□□□□ -1.56
PEP8YJL053W SRS2P12954 1174 aa5.27□□□□□ -1.57
PEP8YJL053W NTA1P40354 457 aa5.27□□□□□ -1.57
PEP8YJL053W OYE3P41816 400 aaPredicted RBP5.27□□□□□ -1.57
PEP8YJL053W GLO4Q12320 285 aa5.27□□□□□ -1.57
PEP8YJL053W HVG1P0CE11 249 aa5.26□□□□□ -1.57
PEP8YJL053W THI80P35202 319 aa5.26□□□□□ -1.57
PEP8YJL053W RAD55P38953 406 aa5.26□□□□□ -1.57
PEP8YJL053W RPS4AP0CX35 261 aaKnown RBP5.25□□□□□ -1.57
PEP8YJL053W RPS4BP0CX36 261 aaKnown RBP5.25□□□□□ -1.57
PEP8YJL053W PRP6P19735 899 aaPredicted RBP5.25□□□□□ -1.57
PEP8YJL053W HDA2Q06629 674 aa5.25□□□□□ -1.57
PEP8YJL053W RRN6P32786 894 aa5.24□□□□□ -1.57
PEP8YJL053W IRS4P36115 615 aaKnown RBP5.24□□□□□ -1.57
PEP8YJL053W SSY1Q03770 852 aa5.24□□□□□ -1.57
PEP8YJL053W TRE1Q08919 783 aa5.24□□□□□ -1.57
PEP8YJL053W TIF6Q12522 245 aaKnown RBP5.24□□□□□ -1.57
PEP8YJL053W FLR1P38124 548 aa5.23□□□□□ -1.57
PEP8YJL053W GCV1P48015 400 aa5.23□□□□□ -1.57
PEP8YJL053W PYC2P32327 1180 aaKnown RBP5.22□□□□□ -1.57
PEP8YJL053W PSY2P40164 858 aa5.22□□□□□ -1.57
PEP8YJL053W SMC1P32908 1225 aa5.21□□□□□ -1.58
PEP8YJL053W ORC3P54790 616 aa5.21□□□□□ -1.58
PEP8YJL053W PRO1P32264 428 aa5.2□□□□□ -1.58
PEP8YJL053W AIM3P38266 947 aaKnown RBP5.2□□□□□ -1.58
PEP8YJL053W CPS1P27614 576 aa5.19□□□□□ -1.58
PEP8YJL053W MSH4P40965 878 aaPredicted RBP5.18□□□□□ -1.58
PEP8YJL053W MRPL22P53881 309 aa5.18□□□□□ -1.58
PEP8YJL053W PUP1P25043 261 aa5.17□□□□□ -1.58
PEP8YJL053W ECM2P38241 364 aaKnown RBP5.17□□□□□ -1.58
PEP8YJL053W GSF2Q04697 403 aaKnown RBP5.17□□□□□ -1.58
PEP8YJL053W PNP1Q05788 311 aa5.17□□□□□ -1.58
PEP8YJL053W YIG1Q08956 461 aa5.17□□□□□ -1.58
PEP8YJL053W YVC1Q12324 675 aa5.17□□□□□ -1.58
PEP8YJL053W KTR2P33550 425 aa5.16□□□□□ -1.58
PEP8YJL053W PTC7P38797 343 aa5.16□□□□□ -1.58
PEP8YJL053W ALT1P52893 592 aa5.16□□□□□ -1.58
PEP8YJL053W RIM8P53179 542 aa5.16□□□□□ -1.58
PEP8YJL053W APC11Q12157 165 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 80.8 ms