RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C ULP1Q02724 621 aa7.59□□□□□ -1.19
YIR043CYIR043C YPL109CQ02981 657 aa7.59□□□□□ -1.19
YIR043CYIR043C RGP1P16664 663 aa7.58□□□□□ -1.2
YIR043CYIR043C SKP1P52286 194 aa7.58□□□□□ -1.2
YIR043CYIR043C NUT1P53114 1132 aa7.58□□□□□ -1.2
YIR043CYIR043C TCB1Q12466 1186 aa7.58□□□□□ -1.2
YIR043CYIR043C COBP00163 385 aa7.57□□□□□ -1.2
YIR043CYIR043C PYC2P32327 1180 aaKnown RBP7.57□□□□□ -1.2
YIR043CYIR043C YKL091CP33324 310 aaKnown RBP7.57□□□□□ -1.2
YIR043CYIR043C GDE1Q02979 1223 aa7.57□□□□□ -1.2
YIR043CYIR043C ADI1Q03677 179 aa7.57□□□□□ -1.2
YIR043CYIR043C DUR3P33413 735 aa7.56□□□□□ -1.2
YIR043CYIR043C APM2P38700 605 aa7.56□□□□□ -1.2
YIR043CYIR043C IOC3P43596 787 aa7.56□□□□□ -1.2
YIR043CYIR043C UBP15P50101 1230 aa7.56□□□□□ -1.2
YIR043CYIR043C RVS167P39743 482 aaKnown RBP7.55□□□□□ -1.2
YIR043CYIR043C YJL049WP47048 450 aa7.55□□□□□ -1.2
YIR043CYIR043C YNR040WP53736 256 aa7.55□□□□□ -1.2
YIR043CYIR043C DPS1P04802 557 aaKnown RBP7.54□□□□□ -1.2
YIR043CYIR043C CDC34P14682 295 aa7.54□□□□□ -1.2
YIR043CYIR043C NMD2P38798 1089 aaKnown RBP7.54□□□□□ -1.2
YIR043CYIR043C PIC2P40035 300 aa7.54□□□□□ -1.2
YIR043CYIR043C FAA4P47912 694 aaKnown RBP7.54□□□□□ -1.2
YIR043CYIR043C RNH70P53331 553 aa7.54□□□□□ -1.2
YIR043CYIR043C MSH6Q03834 1242 aa7.54□□□□□ -1.2
YIR043CYIR043C NSE3Q05541 303 aa7.54□□□□□ -1.2
YIR043CYIR043C PRI2P20457 528 aa7.53□□□□□ -1.2
YIR043CYIR043C MRPL16P38064 232 aa7.53□□□□□ -1.2
YIR043CYIR043C IOC4Q04213 475 aa7.53□□□□□ -1.2
YIR043CYIR043C SQT1P35184 431 aa7.52□□□□□ -1.21
YIR043CYIR043C SPC42P36094 363 aa7.52□□□□□ -1.21
YIR043CYIR043C NCL1P38205 684 aaKnown RBP7.52□□□□□ -1.21
YIR043CYIR043C RSM26P47141 266 aa7.52□□□□□ -1.21
YIR043CYIR043C YAF9P53930 226 aa7.52□□□□□ -1.21
YIR043CYIR043C UBP2Q01476 1272 aa7.52□□□□□ -1.21
YIR043CYIR043C PMT7Q06644 662 aa7.52□□□□□ -1.21
YIR043CYIR043C CDC53Q12018 815 aaKnown RBP7.52□□□□□ -1.21
YIR043CYIR043C GCR1P07261 785 aa7.51□□□□□ -1.21
YIR043CYIR043C PPG1P32838 368 aa7.51□□□□□ -1.21
YIR043CYIR043C CDC19P00549 500 aaKnown RBP7.5□□□□□ -1.21
YIR043CYIR043C STI1P15705 589 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
YIR043CYIR043C GRX1P25373 110 aaKnown RBP7.5□□□□□ -1.21
YIR043CYIR043C DUT1P33317 147 aa7.5□□□□□ -1.21
YIR043CYIR043C OSW7P43611 510 aa7.5□□□□□ -1.21
YIR043CYIR043C PPT1P53043 513 aa7.5□□□□□ -1.21
YIR043CYIR043C DOS2P54858 310 aa7.5□□□□□ -1.21
YIR043CYIR043C RTT10Q08924 1013 aa7.5□□□□□ -1.21
YIR043CYIR043C CIT2P08679 460 aa7.49□□□□□ -1.21
YIR043CYIR043C XKS1P42826 600 aa7.49□□□□□ -1.21
YIR043CYIR043C SAP155P43612 1002 aa7.49□□□□□ -1.21
YIR043CYIR043C MRL1Q06815 381 aa7.49□□□□□ -1.21
YIR043CYIR043C YOR131CQ12486 218 aa7.49□□□□□ -1.21
YIR043CYIR043C YLR346CQ06139 101 aa7.48□□□□□ -1.21
YIR043CYIR043C TDA5Q06417 326 aaKnown RBP7.48□□□□□ -1.21
YIR043CYIR043C RSC2Q06488 889 aa7.48□□□□□ -1.21
YIR043CYIR043C OPI10Q08202 246 aa7.48□□□□□ -1.21
YIR043CYIR043C RPP1AP05318 106 aaPredicted RBP7.47□□□□□ -1.21
YIR043CYIR043C RAD27P26793 382 aa7.47□□□□□ -1.21
YIR043CYIR043C RIM11P38615 370 aa7.47□□□□□ -1.21
YIR043CYIR043C PEX28P38848 579 aa7.47□□□□□ -1.21
YIR043CYIR043C YER156CP40093 338 aaKnown RBP7.47□□□□□ -1.21
YIR043CYIR043C YJL181WP46987 611 aa7.47□□□□□ -1.21
YIR043CYIR043C YGR053CP53234 283 aa7.47□□□□□ -1.21
YIR043CYIR043C PEX13P80667 386 aa7.47□□□□□ -1.21
YIR043CYIR043C FAL1Q12099 399 aaKnown RBP7.47□□□□□ -1.21
YIR043CYIR043C NPR1P22211 790 aa7.46□□□□□ -1.22
YIR043CYIR043C OSH7P38755 437 aa7.46□□□□□ -1.22
YIR043CYIR043C RPN4Q03465 531 aa7.46□□□□□ -1.22
YIR043CYIR043C BDF2Q07442 638 aa7.46□□□□□ -1.22
YIR043CYIR043C TMA46Q12000 345 aaKnown RBP7.46□□□□□ -1.22
YIR043CYIR043C CMR1Q12510 522 aaKnown RBP7.46□□□□□ -1.22
YIR043CYIR043C IDI1P15496 288 aa7.45□□□□□ -1.22
YIR043CYIR043C PBP2P38151 413 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
YIR043CYIR043C HUL5P53119 910 aa7.45□□□□□ -1.22
YIR043CYIR043C OPT2Q06593 877 aa7.45□□□□□ -1.22
YIR043CYIR043C FUS1P11710 512 aa7.44□□□□□ -1.22
YIR043CYIR043C BAS1P22035 811 aa7.44□□□□□ -1.22
YIR043CYIR043C SPF1P39986 1215 aaKnown RBP7.44□□□□□ -1.22
YIR043CYIR043C NAN1Q02931 896 aaKnown RBP7.44□□□□□ -1.22
YIR043CYIR043C GLO4Q12320 285 aa7.44□□□□□ -1.22
YIR043CYIR043C RAD4P14736 754 aa7.43□□□□□ -1.22
YIR043CYIR043C YKL069WP36088 180 aa7.43□□□□□ -1.22
YIR043CYIR043C TAT2P38967 592 aa7.43□□□□□ -1.22
YIR043CYIR043C TIM54P47045 478 aa7.43□□□□□ -1.22
YIR043CYIR043C YGL140CP53120 1219 aa7.43□□□□□ -1.22
YIR043CYIR043C TRK1P12685 1235 aa7.42□□□□□ -1.22
YIR043CYIR043C PRP5P21372 849 aaPredicted RBP7.42□□□□□ -1.22
YIR043CYIR043C MSH3P25336 1018 aa7.42□□□□□ -1.22
YIR043CYIR043C SHU2P38957 223 aa7.42□□□□□ -1.22
YIR043CYIR043C ALG12P53730 551 aa7.42□□□□□ -1.22
YIR043CYIR043C NAM8Q00539 523 aaKnown RBP7.42□□□□□ -1.22
YIR043CYIR043C EEB1Q02891 456 aa7.42□□□□□ -1.22
YIR043CYIR043C HEH2Q03281 663 aa7.42□□□□□ -1.22
YIR043CYIR043C CCP1P00431 361 aa7.41□□□□□ -1.22
YIR043CYIR043C SEC23P15303 768 aaKnown RBP7.41□□□□□ -1.22
YIR043CYIR043C GLY1P37303 387 aaKnown RBP7.41□□□□□ -1.22
YIR043CYIR043C BUD6P41697 788 aa7.41□□□□□ -1.22
YIR043CYIR043C SCW11P53189 542 aa7.41□□□□□ -1.22
YIR043CYIR043C KRE33P53914 1056 aaKnown RBP7.41□□□□□ -1.22
YIR043CYIR043C NOG1Q02892 647 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 115.8 ms