RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	APM2	P38700	605 aa		4.69	□□□□□ -1.66
NDC80	YIL144W	OSH7	P38755	437 aa		4.69	□□□□□ -1.66
NDC80	YIL144W	AIM46	P38885	310 aa		4.69	□□□□□ -1.66
NDC80	YIL144W	RAD2	P07276	1031 aa		4.68	□□□□□ -1.66
NDC80	YIL144W	OCA5	P38738	679 aa		4.68	□□□□□ -1.66
NDC80	YIL144W	CIC1	P38779	376 aa	Known RBP	4.68	□□□□□ -1.66
NDC80	YIL144W	DAL4	Q04895	635 aa		4.68	□□□□□ -1.66
NDC80	YIL144W	TY1A-BL	Q12266	440 aa		4.68	□□□□□ -1.66
NDC80	YIL144W	PYC2	P32327	1180 aa	Known RBP	4.68	□□□□□ -1.66
NDC80	YIL144W	YHL008C	P38750	627 aa		4.68	□□□□□ -1.66
NDC80	YIL144W	YCS4	Q06156	1176 aa		4.68	□□□□□ -1.66
NDC80	YIL144W	PHM7	Q12252	991 aa		4.68	□□□□□ -1.66
NDC80	YIL144W	ALD3	P54114	506 aa		4.67	□□□□□ -1.66
NDC80	YIL144W	UBP2	Q01476	1272 aa		4.67	□□□□□ -1.66
NDC80	YIL144W	VPS16	Q03308	798 aa		4.67	□□□□□ -1.66
NDC80	YIL144W	PRP40	P33203	583 aa	Known RBP	4.66	□□□□□ -1.66
NDC80	YIL144W	MSC7	P38694	644 aa		4.66	□□□□□ -1.66
NDC80	YIL144W	SCW11	P53189	542 aa		4.66	□□□□□ -1.66
NDC80	YIL144W	OXR1	Q08952	273 aa		4.66	□□□□□ -1.66
NDC80	YIL144W	PIN2	Q12057	282 aa		4.66	□□□□□ -1.66
NDC80	YIL144W	PEP7	P32609	515 aa		4.66	□□□□□ -1.66
NDC80	YIL144W	NUT1	P53114	1132 aa		4.66	□□□□□ -1.66
NDC80	YIL144W	MON1	P53129	644 aa		4.66	□□□□□ -1.66
NDC80	YIL144W	MCM5	P29496	775 aa	Known RBP	4.65	□□□□□ -1.66
NDC80	YIL144W	PIC2	P40035	300 aa		4.65	□□□□□ -1.66
NDC80	YIL144W	ALD6	P54115	500 aa	Known RBP	4.65	□□□□□ -1.66
NDC80	YIL144W	MSH6	Q03834	1242 aa		4.65	□□□□□ -1.66
NDC80	YIL144W	MRP10	O75012	95 aa		4.65	□□□□□ -1.67
NDC80	YIL144W	IDI1	P15496	288 aa		4.65	□□□□□ -1.67
NDC80	YIL144W	SAP155	P43612	1002 aa		4.65	□□□□□ -1.67
NDC80	YIL144W	ULP1	Q02724	621 aa		4.65	□□□□□ -1.67
NDC80	YIL144W	YPL109C	Q02981	657 aa		4.65	□□□□□ -1.67
NDC80	YIL144W	RMD1	Q03441	430 aa		4.65	□□□□□ -1.67
NDC80	YIL144W	PRE9	P23638	258 aa	Known RBP	4.64	□□□□□ -1.67
NDC80	YIL144W	VAC8	P39968	578 aa		4.64	□□□□□ -1.67
NDC80	YIL144W	YER156C	P40093	338 aa	Known RBP	4.64	□□□□□ -1.67
NDC80	YIL144W	ESF1	Q06344	628 aa	Known RBP	4.64	□□□□□ -1.67
NDC80	YIL144W	CCP1	P00431	361 aa		4.63	□□□□□ -1.67
NDC80	YIL144W	RIM11	P38615	370 aa		4.63	□□□□□ -1.67
NDC80	YIL144W	URN1	Q06525	465 aa	Known RBP	4.63	□□□□□ -1.67
NDC80	YIL144W	HEM13	P11353	328 aa	Known RBP	4.63	□□□□□ -1.67
NDC80	YIL144W	DUT1	P33317	147 aa		4.63	□□□□□ -1.67
NDC80	YIL144W	CMR1	Q12510	522 aa	Known RBP	4.63	□□□□□ -1.67
NDC80	YIL144W	HVG1	P0CE11	249 aa		4.62	□□□□□ -1.67
NDC80	YIL144W	TFA2	P36145	328 aa		4.62	□□□□□ -1.67
NDC80	YIL144W	CUZ1	P53899	274 aa		4.62	□□□□□ -1.67
NDC80	YIL144W	DIT1	P21623	536 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	NPR1	P22211	790 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	PET112	P33893	541 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	NCL1	P38205	684 aa	Known RBP	4.61	□□□□□ -1.67
NDC80	YIL144W	YBR287W	P38355	427 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	MRPS18	P42847	217 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	ROG3	P43602	733 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	PPT1	P53043	513 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	ADI1	Q03677	179 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	TY1A-MR1	Q04215	440 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	YTA7	P40340	1379 aa		4.61	□□□□□ -1.67
NDC80	YIL144W	PRP5	P21372	849 aa	Predicted RBP	4.61	□□□□□ -1.67
NDC80	YIL144W	AMN1	P38285	549 aa	Predicted RBP	4.61	□□□□□ -1.67
NDC80	YIL144W	SSF2	Q12153	453 aa	Predicted RBP	4.61	□□□□□ -1.67
NDC80	YIL144W	GCR1	P07261	785 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	MDJ1	P35191	511 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	TAT2	P38967	592 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	RVS167	P39743	482 aa	Known RBP	4.6	□□□□□ -1.67
NDC80	YIL144W	INP51	P40559	946 aa	Known RBP	4.6	□□□□□ -1.67
NDC80	YIL144W	YAF9	P53930	226 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	MCD1	Q12158	566 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	GLO4	Q12320	285 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	DPH6	Q12429	685 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	MNR2	P35724	969 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	MAD1	P40957	749 aa		4.6	□□□□□ -1.67
NDC80	YIL144W	BIO5	P53744	561 aa	Known RBP	4.6	□□□□□ -1.67
NDC80	YIL144W	FUS1	P11710	512 aa		4.59	□□□□□ -1.67
NDC80	YIL144W	YJL181W	P46987	611 aa		4.59	□□□□□ -1.67
NDC80	YIL144W	FAA4	P47912	694 aa	Known RBP	4.59	□□□□□ -1.67
NDC80	YIL144W	GNP1	P48813	663 aa		4.59	□□□□□ -1.67
NDC80	YIL144W	CDC34	P14682	295 aa		4.58	□□□□□ -1.68
NDC80	YIL144W	PRK1	P40494	810 aa		4.58	□□□□□ -1.68
NDC80	YIL144W	IOC3	P43596	787 aa		4.58	□□□□□ -1.68
NDC80	YIL144W	YGR053C	P53234	283 aa		4.58	□□□□□ -1.68
NDC80	YIL144W	YNR065C	P53751	1116 aa		4.58	□□□□□ -1.68
NDC80	YIL144W	KRE33	P53914	1056 aa	Known RBP	4.58	□□□□□ -1.68
NDC80	YIL144W	TY1A-DR2	Q03964	440 aa	Known RBP	4.58	□□□□□ -1.68
NDC80	YIL144W	NNF1	P47149	201 aa		4.58	□□□□□ -1.68
NDC80	YIL144W	NOG1	Q02892	647 aa	Known RBP	4.58	□□□□□ -1.68
NDC80	YIL144W	KAR2	P16474	682 aa	Known RBP	4.57	□□□□□ -1.68
NDC80	YIL144W	CLN2	P20438	545 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	ECM2	P38241	364 aa	Known RBP	4.57	□□□□□ -1.68
NDC80	YIL144W	YJR124C	P47159	448 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	ADE12	P80210	433 aa	Known RBP	4.57	□□□□□ -1.68
NDC80	YIL144W	HEH2	Q03281	663 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	PMT7	Q06644	662 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	SYT1	Q06836	1226 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	YGL140C	P53120	1219 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	YMR265C	Q03508	461 aa	Known RBP	4.57	□□□□□ -1.68
NDC80	YIL144W	REC8	Q12188	680 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	YOL098C	Q12496	1037 aa		4.57	□□□□□ -1.68
NDC80	YIL144W	YKL069W	P36088	180 aa		4.56	□□□□□ -1.68
NDC80	YIL144W	HXT13	P39924	564 aa		4.56	□□□□□ -1.68
NDC80	YIL144W	XKS1	P42826	600 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms