RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C TY2B-OR1Q12113 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY1B-BRQ12193 1756 aa6.46□□□□□ -1.38
SDS3YIL084C TY1B-GR3Q12316 1755 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-DR1Q12472 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY2B-OR2Q12501 1770 aa6.46□□□□□ -1.38
SDS3YIL084C TY1B-ORQ92393 1755 aa6.46□□□□□ -1.38
SDS3YIL084C AI3P03877 415 aa6.45□□□□□ -1.38
SDS3YIL084C MRPL33P20084 86 aa6.45□□□□□ -1.38
SDS3YIL084C QDR1P40475 563 aa6.45□□□□□ -1.38
SDS3YIL084C IRC24P40580 263 aa6.45□□□□□ -1.38
SDS3YIL084C YNR040WP53736 256 aa6.45□□□□□ -1.38
SDS3YIL084C HEH2Q03281 663 aa6.45□□□□□ -1.38
SDS3YIL084C TRL1P09880 827 aaKnown RBP6.44□□□□□ -1.38
SDS3YIL084C PGM1P33401 570 aaKnown RBP6.44□□□□□ -1.38
SDS3YIL084C ACF4P47129 309 aa6.44□□□□□ -1.38
SDS3YIL084C LTE1P07866 1435 aa6.43□□□□□ -1.38
SDS3YIL084C SSN2P38931 1420 aa6.43□□□□□ -1.38
SDS3YIL084C MRP10O75012 95 aa6.43□□□□□ -1.38
SDS3YIL084C RPP1AP05318 106 aaPredicted RBP6.43□□□□□ -1.38
SDS3YIL084C SEC20P28791 383 aa6.43□□□□□ -1.38
SDS3YIL084C RRM3P38766 723 aa6.43□□□□□ -1.38
SDS3YIL084C MET5P47169 1442 aa6.42□□□□□ -1.38
SDS3YIL084C CHD1P32657 1468 aa6.42□□□□□ -1.38
SDS3YIL084C SCC2Q04002 1493 aa6.42□□□□□ -1.38
SDS3YIL084C RKR1Q04781 1562 aa6.42□□□□□ -1.38
SDS3YIL084C MDJ2P42834 146 aa6.41□□□□□ -1.38
SDS3YIL084C SKP1P52286 194 aa6.41□□□□□ -1.38
SDS3YIL084C CUS1Q02554 436 aaPredicted RBP6.41□□□□□ -1.38
SDS3YIL084C SEN54Q02825 467 aaPredicted RBP6.41□□□□□ -1.38
SDS3YIL084C APC11Q12157 165 aa6.41□□□□□ -1.38
SDS3YIL084C SAC7P17121 654 aa6.4□□□□□ -1.38
SDS3YIL084C VMA3P25515 160 aa6.4□□□□□ -1.38
SDS3YIL084C BOI1P38041 980 aaKnown RBP6.4□□□□□ -1.38
SDS3YIL084C LDH1P38139 375 aa6.4□□□□□ -1.38
SDS3YIL084C YHL050CP38721 697 aa6.4□□□□□ -1.38
SDS3YIL084C DYS1P38791 387 aa6.4□□□□□ -1.38
SDS3YIL084C YHR219WP38900 624 aa6.4□□□□□ -1.38
SDS3YIL084C TRP3P00937 484 aa6.39□□□□□ -1.39
SDS3YIL084C SUT1P53032 299 aaKnown RBP6.39□□□□□ -1.39
SDS3YIL084C MSC6Q08818 692 aaKnown RBP6.39□□□□□ -1.39
SDS3YIL084C HEM3P28789 327 aa6.38□□□□□ -1.39
SDS3YIL084C KAP122P32767 1081 aa6.38□□□□□ -1.39
SDS3YIL084C YKR073CP36153 106 aa6.38□□□□□ -1.39
SDS3YIL084C NCL1P38205 684 aaKnown RBP6.38□□□□□ -1.39
SDS3YIL084C QDR2P40474 542 aa6.38□□□□□ -1.39
SDS3YIL084C AVT1P47082 602 aa6.38□□□□□ -1.39
SDS3YIL084C UFD2P54860 961 aa6.38□□□□□ -1.39
SDS3YIL084C TY2B-BQ12491 1770 aa6.37□□□□□ -1.39
SDS3YIL084C GEA2P39993 1459 aaKnown RBP6.37□□□□□ -1.39
SDS3YIL084C RPB10P22139 70 aa6.37□□□□□ -1.39
SDS3YIL084C SMC1P32908 1225 aa6.37□□□□□ -1.39
SDS3YIL084C FIR1P40020 876 aa6.37□□□□□ -1.39
SDS3YIL084C HXT8P40886 569 aa6.37□□□□□ -1.39
SDS3YIL084C TY1B-HO13535 1793 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-DR5P0C2I2 1755 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-DR6P0C2I3 1755 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-LR2P0C2I5 1755 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-LR3P0C2I6 1755 aaKnown RBP6.36□□□□□ -1.39
SDS3YIL084C TY1B-PR1P0C2I9 1755 aaKnown RBP6.36□□□□□ -1.39
SDS3YIL084C TY1B-PR2P0C2J0 1756 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-PR3P0C2J1 1755 aaKnown RBP6.36□□□□□ -1.39
SDS3YIL084C TY1B-JR1P47098 1755 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-ML2Q03434 1755 aaKnown RBP6.36□□□□□ -1.39
SDS3YIL084C TY1B-ER1Q03612 1755 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-ML1Q04711 1755 aaKnown RBP6.36□□□□□ -1.39
SDS3YIL084C TY1B-GR2Q12269 1755 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-OLQ12273 1755 aa6.36□□□□□ -1.39
SDS3YIL084C TY1B-PLQ12414 1755 aaKnown RBP6.36□□□□□ -1.39
SDS3YIL084C MMS1Q06211 1407 aa6.36□□□□□ -1.39
SDS3YIL084C YBR287WP38355 427 aa6.36□□□□□ -1.39
SDS3YIL084C PPX1P38698 397 aa6.36□□□□□ -1.39
SDS3YIL084C IPL1P38991 367 aa6.36□□□□□ -1.39
SDS3YIL084C ARI1P53111 347 aaKnown RBP6.36□□□□□ -1.39
SDS3YIL084C TRS120Q04183 1289 aa6.36□□□□□ -1.39
SDS3YIL084C NUT2Q06213 157 aa6.36□□□□□ -1.39
SDS3YIL084C THI12P42883 340 aa6.35□□□□□ -1.39
SDS3YIL084C THI5P43534 340 aa6.35□□□□□ -1.39
SDS3YIL084C THI11P47183 340 aa6.35□□□□□ -1.39
SDS3YIL084C THI13Q07748 340 aa6.35□□□□□ -1.39
SDS3YIL084C PAN1P32521 1480 aa6.34□□□□□ -1.39
SDS3YIL084C YPK9Q12697 1472 aa6.34□□□□□ -1.39
SDS3YIL084C NAB2P32505 525 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39 RIP-Chip
SDS3YIL084C APM2P38700 605 aa6.34□□□□□ -1.39
SDS3YIL084C RPC31P17890 251 aa6.33□□□□□ -1.4
SDS3YIL084C ASF1P32447 279 aa6.33□□□□□ -1.4
SDS3YIL084C ISW1P38144 1129 aa6.33□□□□□ -1.4
SDS3YIL084C FRT1Q99332 602 aa6.33□□□□□ -1.4
SDS3YIL084C YRF1-1P0CX20 1796 aa6.33□□□□□ -1.4
SDS3YIL084C YRF1-5P0CX21 1796 aa6.33□□□□□ -1.4
SDS3YIL084C YRF1-8P0CX22 1796 aa6.33□□□□□ -1.4
SDS3YIL084C TY1B-DR3Q99231 1755 aa6.33□□□□□ -1.4
SDS3YIL084C RPO31P04051 1460 aa6.33□□□□□ -1.4
SDS3YIL084C IRC20Q06554 1556 aa6.32□□□□□ -1.4
SDS3YIL084C MSN1P22148 382 aa6.32□□□□□ -1.4
SDS3YIL084C SFA1P32771 386 aa6.32□□□□□ -1.4
SDS3YIL084C GIP1P38229 639 aa6.32□□□□□ -1.4
SDS3YIL084C CTH1P47976 325 aa6.32□□□□□ -1.4
SDS3YIL084C YOR296WQ08748 1289 aa6.32□□□□□ -1.4
SDS3YIL084C YLR122CQ12312 125 aa6.32□□□□□ -1.4
SDS3YIL084C IDI1P15496 288 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms