RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W SBE2P42223 864 aaKnown RBP6.41□□□□□ -1.38
PDE1YGL248W RIM21P48565 533 aa6.41□□□□□ -1.38
PDE1YGL248W FPS1P23900 669 aa6.4□□□□□ -1.38
PDE1YGL248W THI12P42883 340 aa6.4□□□□□ -1.38
PDE1YGL248W THI5P43534 340 aa6.4□□□□□ -1.38
PDE1YGL248W CCT8P47079 568 aaKnown RBP6.4□□□□□ -1.38
PDE1YGL248W THI11P47183 340 aa6.4□□□□□ -1.38
PDE1YGL248W TLG1Q03322 224 aa6.4□□□□□ -1.38
PDE1YGL248W THI13Q07748 340 aa6.4□□□□□ -1.38
PDE1YGL248W PSK2Q08217 1101 aa6.4□□□□□ -1.38
PDE1YGL248W YOR131CQ12486 218 aa6.4□□□□□ -1.38
PDE1YGL248W TY4B-PA0A0B7P3V8 1104 aa6.39□□□□□ -1.39
PDE1YGL248W THS1P04801 734 aaKnown RBP6.39□□□□□ -1.39
PDE1YGL248W PDC6P26263 563 aaKnown RBP6.39□□□□□ -1.39
PDE1YGL248W TGL4P36165 910 aa6.39□□□□□ -1.39
PDE1YGL248W FUI1P38196 639 aa6.39□□□□□ -1.39
PDE1YGL248W MNN1P39106 762 aa6.39□□□□□ -1.39
PDE1YGL248W UBP12P39538 1254 aa6.39□□□□□ -1.39
PDE1YGL248W ALD3P54114 506 aa6.39□□□□□ -1.39
PDE1YGL248W TDA6Q06466 467 aa6.39□□□□□ -1.39
PDE1YGL248W TY4A-HQ6Q5P6 413 aa6.39□□□□□ -1.39
PDE1YGL248W NFU1P32860 256 aa6.38□□□□□ -1.39
PDE1YGL248W MRPL16P38064 232 aa6.38□□□□□ -1.39
PDE1YGL248W ENP1P38333 483 aaKnown RBP6.38□□□□□ -1.39
PDE1YGL248W AIM9P40053 627 aaKnown RBP6.38□□□□□ -1.39
PDE1YGL248W ITC1P53125 1264 aa6.38□□□□□ -1.39
PDE1YGL248W STB3Q12427 513 aa6.38□□□□□ -1.39
PDE1YGL248W MET6P05694 767 aaKnown RBP6.37□□□□□ -1.39
PDE1YGL248W SWI5P08153 709 aa6.37□□□□□ -1.39
PDE1YGL248W MSH4P40965 878 aaPredicted RBP6.37□□□□□ -1.39
PDE1YGL248W BUD6P41697 788 aa6.37□□□□□ -1.39
PDE1YGL248W YJR107WP47145 328 aa6.37□□□□□ -1.39
PDE1YGL248W YJR142WP47173 342 aa6.37□□□□□ -1.39
PDE1YGL248W YNR014WP53719 212 aa6.37□□□□□ -1.39
PDE1YGL248W ALD6P54115 500 aaKnown RBP6.37□□□□□ -1.39
PDE1YGL248W YPQ2Q06328 317 aa6.37□□□□□ -1.39
PDE1YGL248W WRS1Q12109 432 aaKnown RBP6.37□□□□□ -1.39
PDE1YGL248W GPM1P00950 247 aaKnown RBP6.36□□□□□ -1.39
PDE1YGL248W RDS2P19541 446 aaKnown RBP6.36□□□□□ -1.39
PDE1YGL248W PBP2P38151 413 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
PDE1YGL248W YEN1P40028 759 aa6.36□□□□□ -1.39
PDE1YGL248W MAD1P40957 749 aa6.36□□□□□ -1.39
PDE1YGL248W YMR187CQ03236 431 aa6.36□□□□□ -1.39
PDE1YGL248W KAR5Q04746 504 aa6.36□□□□□ -1.39
PDE1YGL248W MRC1P25588 1096 aa6.35□□□□□ -1.39
PDE1YGL248W MAL31P38156 614 aa6.35□□□□□ -1.39
PDE1YGL248W CDC53Q12018 815 aaKnown RBP6.35□□□□□ -1.39
PDE1YGL248W WHI5Q12416 295 aa6.35□□□□□ -1.39
PDE1YGL248W ENO1P00924 437 aaKnown RBP6.34□□□□□ -1.39
PDE1YGL248W TRL1P09880 827 aaKnown RBP6.34□□□□□ -1.39
PDE1YGL248W RPS6AP0CX37 236 aaKnown RBP6.34□□□□□ -1.39
PDE1YGL248W RPS6BP0CX38 236 aaPredicted RBP6.34□□□□□ -1.39
PDE1YGL248W TFC3P34111 1160 aa6.34□□□□□ -1.39
PDE1YGL248W MET1P36150 593 aa6.34□□□□□ -1.39
PDE1YGL248W GRS1P38088 690 aaKnown RBP6.34□□□□□ -1.39
PDE1YGL248W MUM2P38236 366 aa6.34□□□□□ -1.39
PDE1YGL248W SKN7P38889 622 aa6.34□□□□□ -1.39
PDE1YGL248W MDJ2P42834 146 aa6.34□□□□□ -1.39
PDE1YGL248W YFL034WP43564 1073 aa6.34□□□□□ -1.39
PDE1YGL248W SVL3Q03088 825 aaKnown RBP6.34□□□□□ -1.39
PDE1YGL248W RPS31P05759 152 aaKnown RBP6.33□□□□□ -1.4
PDE1YGL248W GLO3P38682 493 aaKnown RBP6.33□□□□□ -1.4
PDE1YGL248W DAK2P43550 591 aa6.33□□□□□ -1.4
PDE1YGL248W MDM1Q01846 1127 aa6.33□□□□□ -1.4
PDE1YGL248W MNL2Q12205 849 aa6.33□□□□□ -1.4
PDE1YGL248W SNU66Q12420 587 aaPredicted RBP6.33□□□□□ -1.4
PDE1YGL248W SWI3P32591 825 aa6.32□□□□□ -1.4
PDE1YGL248W FAF1P40546 346 aaPredicted RBP6.32□□□□□ -1.4
PDE1YGL248W ATG1P53104 897 aa6.32□□□□□ -1.4
PDE1YGL248W ATG16Q03818 150 aa6.32□□□□□ -1.4
PDE1YGL248W MRX10Q05648 414 aa6.32□□□□□ -1.4
PDE1YGL248W HSC82P15108 705 aaKnown RBP6.31□□□□□ -1.4
PDE1YGL248W CLN2P20438 545 aa6.31□□□□□ -1.4
PDE1YGL248W NTH2P35172 780 aa6.31□□□□□ -1.4
PDE1YGL248W MCX1P38323 520 aaPredicted RBP6.31□□□□□ -1.4
PDE1YGL248W NMD3P38861 518 aaKnown RBP6.31□□□□□ -1.4
PDE1YGL248W SPR3P41901 512 aa6.31□□□□□ -1.4
PDE1YGL248W YGR021WP53212 290 aa6.31□□□□□ -1.4
PDE1YGL248W SPO20Q04359 397 aa6.31□□□□□ -1.4
PDE1YGL248W PIN2Q12057 282 aa6.31□□□□□ -1.4
PDE1YGL248W MCM1P11746 286 aa6.3□□□□□ -1.4
PDE1YGL248W RAD27P26793 382 aa6.3□□□□□ -1.4
PDE1YGL248W JNM1P36224 373 aa6.3□□□□□ -1.4
PDE1YGL248W YTA6P40328 754 aa6.3□□□□□ -1.4
PDE1YGL248W FOL1P53848 824 aa6.3□□□□□ -1.4
PDE1YGL248W ECM23Q02710 187 aa6.3□□□□□ -1.4
PDE1YGL248W VPS16Q03308 798 aa6.3□□□□□ -1.4
PDE1YGL248W IMH1Q06704 911 aaKnown RBP6.3□□□□□ -1.4
PDE1YGL248W LEU1P07264 779 aaKnown RBP6.29□□□□□ -1.4
PDE1YGL248W SBP1P10080 294 aaKnown RBP6.29□□□□□ -1.4
PDE1YGL248W PDC5P16467 563 aaKnown RBP6.29□□□□□ -1.4
PDE1YGL248W KNS1P32350 737 aaPredicted RBP6.29□□□□□ -1.4
PDE1YGL248W PAF1P38351 445 aa6.29□□□□□ -1.4
PDE1YGL248W CRP1P38845 465 aaKnown RBP6.29□□□□□ -1.4
PDE1YGL248W BDF2Q07442 638 aa6.29□□□□□ -1.4
PDE1YGL248W PDI1P17967 522 aaKnown RBP6.28□□□□□ -1.4
PDE1YGL248W MTC2P34246 357 aa6.28□□□□□ -1.4
PDE1YGL248W NRD1P53617 575 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4 RIP-Chip
PDE1YGL248W YNL165WP53891 406 aa6.28□□□□□ -1.4
PDE1YGL248W TY1A-DR2Q03964 440 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms