RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	PIM1	P36775	1133 aa		6.28	□□□□□ -1.4
VAM7	YGL212W	MNN1	P39106	762 aa		6.28	□□□□□ -1.4
VAM7	YGL212W	ATG16	Q03818	150 aa		6.28	□□□□□ -1.4
VAM7	YGL212W	GRC3	Q07845	632 aa		6.28	□□□□□ -1.4
VAM7	YGL212W	RPS9B	P05755	195 aa	Known RBP	6.27	□□□□□ -1.41
VAM7	YGL212W	ERG12	P07277	443 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	SPS1	P08458	490 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	ATE1	P16639	503 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	GAP1	P19145	602 aa	Predicted RBP	6.27	□□□□□ -1.41
VAM7	YGL212W	MRF1	P30775	413 aa	Predicted RBP	6.27	□□□□□ -1.41
VAM7	YGL212W	TIM54	P47045	478 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	TCB2	P48231	1178 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	YGR021W	P53212	290 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	ELA1	P53861	379 aa	Predicted RBP	6.27	□□□□□ -1.41
VAM7	YGL212W	TIM11	P81449	96 aa	Predicted RBP	6.27	□□□□□ -1.41
VAM7	YGL212W	VTI1	Q04338	217 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	KAR5	Q04746	504 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	RRI2	Q12348	645 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	RTP1	Q12751	981 aa		6.27	□□□□□ -1.41
VAM7	YGL212W	MPH3	P0CE00	602 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
VAM7	YGL212W	PEX5	P35056	612 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	PAF1	P38351	445 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	APE4	P38821	490 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	YEN1	P40028	759 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	DAK2	P43550	591 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	RSM7	P47150	247 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	RTF1	P53064	558 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	MEC3	Q02574	474 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	SPO20	Q04359	397 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	ESF1	Q06344	628 aa	Known RBP	6.26	□□□□□ -1.41
VAM7	YGL212W	YBL113C	Q7M4S9	792 aa		6.26	□□□□□ -1.41
VAM7	YGL212W	ICL1	P28240	557 aa	Predicted RBP	6.25	□□□□□ -1.41
VAM7	YGL212W	SNF7	P39929	240 aa	Known RBP	6.25	□□□□□ -1.41
VAM7	YGL212W	VAC8	P39968	578 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	BUD6	P41697	788 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	LEM3	P42838	414 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	SRB7	P47822	140 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	VTC3	Q02725	835 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	ATG13	Q06628	738 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	YPR204W	Q08995	1032 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	STB3	Q12427	513 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	RAV1	P47104	1357 aa		6.25	□□□□□ -1.41
VAM7	YGL212W	FBP1	P09201	348 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	YDJ1	P25491	409 aa	Known RBP	6.24	□□□□□ -1.41
VAM7	YGL212W	KRR1	P25586	316 aa	Predicted RBP	6.24	□□□□□ -1.41
VAM7	YGL212W	MTC2	P34246	357 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	HXT5	P38695	592 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	SHC1	P39000	512 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	VPS4	P52917	437 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	NNF2	P53253	936 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	BNI4	P53858	892 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	YML083C	Q04526	418 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	CDC45	Q08032	650 aa		6.24	□□□□□ -1.41
VAM7	YGL212W	NOP14	Q99207	810 aa	Known RBP	6.24	□□□□□ -1.41
VAM7	YGL212W	TAO3	P40468	2376 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	INH1	P01097	85 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	MEF1	P25039	761 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	PUP1	P25043	261 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	RRN3	P36070	627 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
VAM7	YGL212W	YAP1801	P38856	637 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	IRC3	Q06683	689 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	YOR378W	Q08902	515 aa		6.23	□□□□□ -1.41
VAM7	YGL212W	DBP10	Q12389	995 aa	Known RBP	6.23	□□□□□ -1.41
VAM7	YGL212W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
VAM7	YGL212W	SMY1	P32364	656 aa	Known RBP	6.22	□□□□□ -1.41
VAM7	YGL212W	SEC8	P32855	1065 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	RKM3	P38222	552 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	BSD2	P38356	321 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	VPS29	P38759	282 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	RRP8	P38961	392 aa	Known RBP	6.22	□□□□□ -1.41
VAM7	YGL212W	VID27	P40157	782 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	KEL2	P50090	882 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	PEX8	P53248	589 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	ADE16	P54113	591 aa	Known RBP	6.22	□□□□□ -1.41
VAM7	YGL212W	YLR352W	Q06479	807 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	VIP1	Q06685	1146 aa	Known RBP	6.22	□□□□□ -1.41
VAM7	YGL212W	TYW1	Q08960	810 aa	Known RBP	6.22	□□□□□ -1.41
VAM7	YGL212W	YOR131C	Q12486	218 aa		6.22	□□□□□ -1.41
VAM7	YGL212W	YLR419W	Q06698	1435 aa	Known RBP	6.22	□□□□□ -1.41
VAM7	YGL212W	MET6	P05694	767 aa	Known RBP	6.21	□□□□□ -1.42
VAM7	YGL212W	TOM70	P07213	617 aa	Known RBP	6.21	□□□□□ -1.42
VAM7	YGL212W	MPH2	P0CD99	609 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	TPM1	P17536	199 aa	Known RBP	6.21	□□□□□ -1.42
VAM7	YGL212W	ACE2	P21192	770 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	RPL5	P26321	297 aa	Known RBP	6.21	□□□□□ -1.42
VAM7	YGL212W	RAD27	P26793	382 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	SPC110	P32380	944 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	DLD1	P32891	587 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	RPC37	P36121	282 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	CAJ1	P39101	391 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	DOT6	P40059	670 aa	Known RBP	6.21	□□□□□ -1.42
VAM7	YGL212W	IES5	P40060	125 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	AIM20	P40451	204 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	TAF8	Q03750	510 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	AVO1	Q08236	1176 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	YLL054C	Q12244	843 aa		6.21	□□□□□ -1.42
VAM7	YGL212W	HVG1	P0CE11	249 aa		6.2	□□□□□ -1.42
VAM7	YGL212W	NAT1	P12945	854 aa	Known RBP	6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms