RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	FIR1	P40020	876 aa		4.93	□□□□□ -1.62
RPN3	YER021W	NTA1	P40354	457 aa		4.93	□□□□□ -1.62
RPN3	YER021W	MNL2	Q12205	849 aa		4.93	□□□□□ -1.62
RPN3	YER021W	SSK2	P53599	1579 aa		4.93	□□□□□ -1.62
RPN3	YER021W	RAD55	P38953	406 aa		4.92	□□□□□ -1.62
RPN3	YER021W	MSC6	Q08818	692 aa	Known RBP	4.92	□□□□□ -1.62
RPN3	YER021W	TIF6	Q12522	245 aa	Known RBP	4.92	□□□□□ -1.62
RPN3	YER021W	SLD2	P34252	453 aa		4.91	□□□□□ -1.62
RPN3	YER021W	IPL1	P38991	367 aa		4.91	□□□□□ -1.62
RPN3	YER021W	TY1A-DR2	Q03964	440 aa	Known RBP	4.91	□□□□□ -1.62
RPN3	YER021W	EMG1	Q06287	252 aa	Known RBP	4.91	□□□□□ -1.62
RPN3	YER021W	GPI13	Q07830	1017 aa		4.91	□□□□□ -1.62
RPN3	YER021W	PSY2	P40164	858 aa		4.91	□□□□□ -1.62
RPN3	YER021W	HEH2	Q03281	663 aa		4.91	□□□□□ -1.62
RPN3	YER021W	MYO2	P19524	1574 aa	Known RBP	4.9	□□□□□ -1.62
RPN3	YER021W	IDI1	P15496	288 aa		4.9	□□□□□ -1.63
RPN3	YER021W	IRS4	P36115	615 aa	Known RBP	4.9	□□□□□ -1.63
RPN3	YER021W	PPX1	P38698	397 aa		4.9	□□□□□ -1.63
RPN3	YER021W	YIL165C	P40446	119 aa		4.9	□□□□□ -1.63
RPN3	YER021W	PRY1	P47032	299 aa		4.9	□□□□□ -1.63
RPN3	YER021W	WHI5	Q12416	295 aa		4.9	□□□□□ -1.63
RPN3	YER021W	PDC5	P16467	563 aa	Known RBP	4.89	□□□□□ -1.63
RPN3	YER021W	SEC20	P28791	383 aa		4.89	□□□□□ -1.63
RPN3	YER021W	TAT1	P38085	619 aa		4.89	□□□□□ -1.63
RPN3	YER021W	AIM46	P38885	310 aa		4.89	□□□□□ -1.63
RPN3	YER021W	YER156C	P40093	338 aa	Known RBP	4.89	□□□□□ -1.63
RPN3	YER021W	RSC4	Q02206	625 aa		4.89	□□□□□ -1.63
RPN3	YER021W	MAC1	P35192	417 aa		4.88	□□□□□ -1.63
RPN3	YER021W	YBR287W	P38355	427 aa		4.88	□□□□□ -1.63
RPN3	YER021W	YNL011C	P53980	444 aa		4.88	□□□□□ -1.63
RPN3	YER021W	PRK1	P40494	810 aa		4.87	□□□□□ -1.63
RPN3	YER021W	CDC55	Q00362	526 aa		4.87	□□□□□ -1.63
RPN3	YER021W	TAF2	P23255	1407 aa		4.87	□□□□□ -1.63
RPN3	YER021W	KNS1	P32350	737 aa	Predicted RBP	4.87	□□□□□ -1.63
RPN3	YER021W	MET4	P32389	672 aa		4.87	□□□□□ -1.63
RPN3	YER021W	MET1	P36150	593 aa		4.87	□□□□□ -1.63
RPN3	YER021W	MRP10	O75012	95 aa		4.86	□□□□□ -1.63
RPN3	YER021W	THI12	P42883	340 aa		4.86	□□□□□ -1.63
RPN3	YER021W	THI5	P43534	340 aa		4.86	□□□□□ -1.63
RPN3	YER021W	THI11	P47183	340 aa		4.86	□□□□□ -1.63
RPN3	YER021W	PPT1	P53043	513 aa		4.86	□□□□□ -1.63
RPN3	YER021W	ALO1	P54783	526 aa	Known RBP	4.86	□□□□□ -1.63
RPN3	YER021W	YPL034W	Q03083	165 aa		4.86	□□□□□ -1.63
RPN3	YER021W	BSC2	Q05611	235 aa		4.86	□□□□□ -1.63
RPN3	YER021W	THI13	Q07748	340 aa		4.86	□□□□□ -1.63
RPN3	YER021W	RPA190	P10964	1664 aa	Known RBP	4.85	□□□□□ -1.63
RPN3	YER021W	ESC1	Q03661	1658 aa	Known RBP	4.85	□□□□□ -1.63
RPN3	YER021W	CTR9	P89105	1077 aa		4.85	□□□□□ -1.63
RPN3	YER021W	LTE1	P07866	1435 aa		4.85	□□□□□ -1.63
RPN3	YER021W	RSC2	Q06488	889 aa		4.84	□□□□□ -1.63
RPN3	YER021W	CDC25	P04821	1589 aa		4.84	□□□□□ -1.64
RPN3	YER021W	COB	P00163	385 aa		4.83	□□□□□ -1.64
RPN3	YER021W	PHO4	P07270	312 aa	Known RBP	4.83	□□□□□ -1.64
RPN3	YER021W	HEM3	P28789	327 aa		4.83	□□□□□ -1.64
RPN3	YER021W	PYC2	P32327	1180 aa	Known RBP	4.83	□□□□□ -1.64
RPN3	YER021W	YJL181W	P46987	611 aa		4.83	□□□□□ -1.64
RPN3	YER021W	MET5	P47169	1442 aa		4.83	□□□□□ -1.64
RPN3	YER021W	SKI3	P17883	1432 aa	Known RBP	4.82	□□□□□ -1.64
RPN3	YER021W	BNI1	P41832	1953 aa		4.82	□□□□□ -1.64
RPN3	YER021W	FUS1	P11710	512 aa		4.82	□□□□□ -1.64
RPN3	YER021W	INP51	P40559	946 aa	Known RBP	4.82	□□□□□ -1.64
RPN3	YER021W	ALD3	P54114	506 aa		4.82	□□□□□ -1.64
RPN3	YER021W	ATE1	P16639	503 aa		4.81	□□□□□ -1.64
RPN3	YER021W	TFA2	P36145	328 aa		4.81	□□□□□ -1.64
RPN3	YER021W	YHL008C	P38750	627 aa		4.81	□□□□□ -1.64
RPN3	YER021W	IRC24	P40580	263 aa		4.81	□□□□□ -1.64
RPN3	YER021W	DAK2	P43550	591 aa		4.81	□□□□□ -1.64
RPN3	YER021W	SAM37	P50110	327 aa		4.81	□□□□□ -1.64
RPN3	YER021W	INP52	P50942	1183 aa		4.81	□□□□□ -1.64
RPN3	YER021W	RRP15	Q06511	250 aa	Predicted RBP	4.81	□□□□□ -1.64
RPN3	YER021W	NOC3	Q07896	663 aa	Predicted RBP	4.81	□□□□□ -1.64
RPN3	YER021W	INP54	Q08227	384 aa	Known RBP	4.81	□□□□□ -1.64
RPN3	YER021W	SIN3	P22579	1536 aa		4.81	□□□□□ -1.64
RPN3	YER021W	FLP1	P03870	423 aa		4.8	□□□□□ -1.64
RPN3	YER021W	DUR3	P33413	735 aa		4.8	□□□□□ -1.64
RPN3	YER021W	POL32	P47110	350 aa		4.8	□□□□□ -1.64
RPN3	YER021W	BIO5	P53744	561 aa	Known RBP	4.8	□□□□□ -1.64
RPN3	YER021W	NAR1	P23503	491 aa	Known RBP	4.79	□□□□□ -1.64
RPN3	YER021W	GCD6	P32501	712 aa	Known RBP	4.79	□□□□□ -1.64
RPN3	YER021W	OMA1	P36163	345 aa		4.79	□□□□□ -1.64
RPN3	YER021W	CIC1	P38779	376 aa	Known RBP	4.79	□□□□□ -1.64
RPN3	YER021W	GIS4	Q04233	774 aa		4.79	□□□□□ -1.64
RPN3	YER021W	IRC20	Q06554	1556 aa		4.79	□□□□□ -1.64
RPN3	YER021W	GEA2	P39993	1459 aa	Known RBP	4.79	□□□□□ -1.64
RPN3	YER021W	VPS35	P34110	944 aa		4.78	□□□□□ -1.64
RPN3	YER021W	PGM2	P37012	569 aa	Known RBP	4.78	□□□□□ -1.64
RPN3	YER021W	MSH6	Q03834	1242 aa		4.78	□□□□□ -1.64
RPN3	YER021W	GLO4	Q12320	285 aa		4.78	□□□□□ -1.64
RPN3	YER021W	RKR1	Q04781	1562 aa		4.78	□□□□□ -1.64
RPN3	YER021W	DNF1	P32660	1571 aa		4.78	□□□□□ -1.64
RPN3	YER021W	HVG1	P0CE11	249 aa		4.78	□□□□□ -1.64
RPN3	YER021W	RPT1	P33299	467 aa	Known RBP	4.78	□□□□□ -1.64
RPN3	YER021W	ECM2	P38241	364 aa	Known RBP	4.78	□□□□□ -1.64
RPN3	YER021W	ALG14	P38242	237 aa		4.78	□□□□□ -1.64
RPN3	YER021W	TOS4	Q06266	489 aa		4.78	□□□□□ -1.64
RPN3	YER021W	SOG2	Q08817	791 aa		4.78	□□□□□ -1.64
RPN3	YER021W	RIM11	P38615	370 aa		4.77	□□□□□ -1.65
RPN3	YER021W	YJR124C	P47159	448 aa		4.77	□□□□□ -1.65
RPN3	YER021W	UFD4	P33202	1483 aa		4.77	□□□□□ -1.65
RPN3	YER021W	ESP1	Q03018	1630 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms