RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C ASF1P32447 279 aa1.86□□□□□ -2.11
SEC3YER008C RTT106P40161 455 aa1.86□□□□□ -2.11
SEC3YER008C YNR014WP53719 212 aa1.86□□□□□ -2.11
SEC3YER008C SVF1Q05515 481 aa1.86□□□□□ -2.11
SEC3YER008C WHI5Q12416 295 aa1.86□□□□□ -2.11
SEC3YER008C VMA3P25515 160 aa1.86□□□□□ -2.11
SEC3YER008C NGR1P32831 672 aaKnown RBP1.86□□□□□ -2.11
SEC3YER008C CWC15Q03772 175 aaKnown RBP1.86□□□□□ -2.11
SEC3YER008C SAM37P50110 327 aa1.85□□□□□ -2.11
SEC3YER008C ATG1P53104 897 aa1.85□□□□□ -2.11
SEC3YER008C UFD2P54860 961 aa1.85□□□□□ -2.11
SEC3YER008C PDC6P26263 563 aaKnown RBP1.85□□□□□ -2.11
SEC3YER008C MET22P32179 357 aa1.85□□□□□ -2.11
SEC3YER008C RPT1P33299 467 aaKnown RBP1.85□□□□□ -2.11
SEC3YER008C BSD2P38356 321 aa1.85□□□□□ -2.11
SEC3YER008C PPT1P53043 513 aa1.85□□□□□ -2.11
SEC3YER008C YGR035CP53222 116 aa1.85□□□□□ -2.11
SEC3YER008C YNR063WP53749 607 aa1.85□□□□□ -2.11
SEC3YER008C NUT2Q06213 157 aa1.85□□□□□ -2.11
SEC3YER008C DNF2Q12675 1612 aa1.85□□□□□ -2.11
SEC3YER008C MCM2P29469 868 aa1.85□□□□□ -2.11
SEC3YER008C ISW1P38144 1129 aa1.85□□□□□ -2.11
SEC3YER008C UBP15P50101 1230 aa1.85□□□□□ -2.11
SEC3YER008C GCD6P32501 712 aaKnown RBP1.84□□□□□ -2.11
SEC3YER008C DAL4Q04895 635 aa1.84□□□□□ -2.11
SEC3YER008C RPP1AP05318 106 aaPredicted RBP1.84□□□□□ -2.11
SEC3YER008C APL6P46682 809 aa1.84□□□□□ -2.11
SEC3YER008C JSN1P47135 1091 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
SEC3YER008C PEX13P80667 386 aa1.84□□□□□ -2.11
SEC3YER008C MAG2Q06436 670 aaKnown RBP1.84□□□□□ -2.11
SEC3YER008C YNL165WP53891 406 aa1.84□□□□□ -2.12
SEC3YER008C TRS120Q04183 1289 aa1.84□□□□□ -2.12
SEC3YER008C GLY1P37303 387 aaKnown RBP1.83□□□□□ -2.12
SEC3YER008C BOI1P38041 980 aaKnown RBP1.83□□□□□ -2.12
SEC3YER008C BRN1P38170 754 aa1.83□□□□□ -2.12
SEC3YER008C GIP1P38229 639 aa1.83□□□□□ -2.12
SEC3YER008C OCA5P38738 679 aa1.83□□□□□ -2.12
SEC3YER008C ACF4P47129 309 aa1.83□□□□□ -2.12
SEC3YER008C SOK2P53438 785 aaPredicted RBP1.83□□□□□ -2.12
SEC3YER008C CUS1Q02554 436 aaPredicted RBP1.83□□□□□ -2.12
SEC3YER008C CAB1Q04430 367 aa1.83□□□□□ -2.12
SEC3YER008C RSC2Q06488 889 aa1.83□□□□□ -2.12
SEC3YER008C MSC6Q08818 692 aaKnown RBP1.83□□□□□ -2.12
SEC3YER008C PSH1Q12161 406 aa1.83□□□□□ -2.12
SEC3YER008C MCM1P11746 286 aa1.83□□□□□ -2.12
SEC3YER008C KAR2P16474 682 aaKnown RBP1.83□□□□□ -2.12
SEC3YER008C RAD27P26793 382 aa1.83□□□□□ -2.12
SEC3YER008C OSH7P38755 437 aa1.83□□□□□ -2.12
SEC3YER008C SSN2P38931 1420 aa1.83□□□□□ -2.12
SEC3YER008C MSN5P52918 1224 aa1.83□□□□□ -2.12
SEC3YER008C MSN1P22148 382 aa1.83□□□□□ -2.12
SEC3YER008C MCM5P29496 775 aaKnown RBP1.83□□□□□ -2.12
SEC3YER008C SEC8P32855 1065 aa1.83□□□□□ -2.12
SEC3YER008C MET1P36150 593 aa1.83□□□□□ -2.12
SEC3YER008C ALG14P38242 237 aa1.83□□□□□ -2.12
SEC3YER008C SPR28Q04921 423 aa1.83□□□□□ -2.12
SEC3YER008C INP54Q08227 384 aaKnown RBP1.83□□□□□ -2.12
SEC3YER008C MLP2P40457 1679 aa1.83□□□□□ -2.12
SEC3YER008C CHC1P22137 1653 aaKnown RBP1.83□□□□□ -2.12
SEC3YER008C RGP1P16664 663 aa1.82□□□□□ -2.12
SEC3YER008C SUV3P32580 737 aa1.82□□□□□ -2.12
SEC3YER008C RPS26AP39938 119 aaKnown RBP1.82□□□□□ -2.12
SEC3YER008C RPS26BP39939 119 aaKnown RBP1.82□□□□□ -2.12
SEC3YER008C VAC8P39968 578 aa1.82□□□□□ -2.12
SEC3YER008C MDJ2P42834 146 aa1.82□□□□□ -2.12
SEC3YER008C RNH70P53331 553 aa1.82□□□□□ -2.12
SEC3YER008C RRP15Q06511 250 aaPredicted RBP1.82□□□□□ -2.12
SEC3YER008C AVO1Q08236 1176 aa1.82□□□□□ -2.12
SEC3YER008C YTA7P40340 1379 aa1.82□□□□□ -2.12
SEC3YER008C YKL077WP36081 392 aa1.82□□□□□ -2.12
SEC3YER008C PSY2P40164 858 aa1.82□□□□□ -2.12
SEC3YER008C ROG3P43602 733 aa1.82□□□□□ -2.12
SEC3YER008C LSO1Q3E827 93 aa1.82□□□□□ -2.12
SEC3YER008C DOP1Q03921 1698 aa1.82□□□□□ -2.12
SEC3YER008C MET5P47169 1442 aa1.82□□□□□ -2.12
SEC3YER008C CDC19P00549 500 aaKnown RBP1.82□□□□□ -2.12
SEC3YER008C UBP1P25037 809 aa1.82□□□□□ -2.12
SEC3YER008C IRS4P36115 615 aaKnown RBP1.82□□□□□ -2.12
SEC3YER008C FYV10P40492 516 aa1.82□□□□□ -2.12
SEC3YER008C FAR11P53917 953 aa1.82□□□□□ -2.12
SEC3YER008C BSC2Q05611 235 aa1.82□□□□□ -2.12
SEC3YER008C SSN3P39073 555 aa1.82□□□□□ -2.12
SEC3YER008C YIR007WP40566 764 aa1.82□□□□□ -2.12
SEC3YER008C MRPS18P42847 217 aa1.82□□□□□ -2.12
SEC3YER008C ALD3P54114 506 aa1.82□□□□□ -2.12
SEC3YER008C LCB5Q06147 687 aaKnown RBP1.82□□□□□ -2.12
SEC3YER008C MRL1Q06815 381 aa1.82□□□□□ -2.12
SEC3YER008C FRT1Q99332 602 aa1.82□□□□□ -2.12
SEC3YER008C TRL1P09880 827 aaKnown RBP1.81□□□□□ -2.12
SEC3YER008C SHM1P37292 490 aaPredicted RBP1.81□□□□□ -2.12
SEC3YER008C YNL011CP53980 444 aa1.81□□□□□ -2.12
SEC3YER008C ULS1Q08562 1619 aa1.81□□□□□ -2.12
SEC3YER008C CUZ1P53899 274 aa1.81□□□□□ -2.12
SEC3YER008C WRS1Q12109 432 aaKnown RBP1.81□□□□□ -2.12
SEC3YER008C BOI2P39969 1040 aa1.81□□□□□ -2.12
SEC3YER008C IOC3P43596 787 aa1.81□□□□□ -2.12
SEC3YER008C ALD6P54115 500 aaKnown RBP1.81□□□□□ -2.12
SEC3YER008C MTC5Q03897 1148 aa1.81□□□□□ -2.12
SEC3YER008C THI72Q08579 599 aa1.81□□□□□ -2.12
SEC3YER008C TSR4P25040 408 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms