RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W SOG2Q08817 791 aa7.14□□□□□ -1.27
SHE9YDR393W CHS2P14180 963 aa7.13□□□□□ -1.27
SHE9YDR393W BOI1P38041 980 aaKnown RBP7.13□□□□□ -1.27
SHE9YDR393W AIM46P38885 310 aa7.13□□□□□ -1.27
SHE9YDR393W IRC24P40580 263 aa7.13□□□□□ -1.27
SHE9YDR393W APC11Q12157 165 aa7.13□□□□□ -1.27
SHE9YDR393W FUS1P11710 512 aa7.12□□□□□ -1.27
SHE9YDR393W YBR287WP38355 427 aa7.12□□□□□ -1.27
SHE9YDR393W CTH1P47976 325 aa7.12□□□□□ -1.27
SHE9YDR393W YGR130CP53278 816 aa7.12□□□□□ -1.27
SHE9YDR393W SSA4P22202 642 aaKnown RBP7.11□□□□□ -1.27
SHE9YDR393W LIP5P32875 414 aa7.11□□□□□ -1.27
SHE9YDR393W SUT1P53032 299 aaKnown RBP7.11□□□□□ -1.27
SHE9YDR393W PNP1Q05788 311 aa7.11□□□□□ -1.27
SHE9YDR393W POL5P39985 1022 aaKnown RBP7.1□□□□□ -1.27
SHE9YDR393W LEM3P42838 414 aa7.1□□□□□ -1.27
SHE9YDR393W RPB10P22139 70 aa7.09□□□□□ -1.27
SHE9YDR393W PUB1P32588 453 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
SHE9YDR393W NTA1P40354 457 aa7.09□□□□□ -1.27
SHE9YDR393W AVT1P47082 602 aa7.09□□□□□ -1.27
SHE9YDR393W RRN6P32786 894 aa7.08□□□□□ -1.28
SHE9YDR393W BRE4Q07660 1125 aa7.08□□□□□ -1.28
SHE9YDR393W TIF6Q12522 245 aaKnown RBP7.08□□□□□ -1.28
SHE9YDR393W MAE1P36013 669 aaKnown RBP7.07□□□□□ -1.28
SHE9YDR393W SPO74P45819 413 aa7.07□□□□□ -1.28
SHE9YDR393W NCE103P53615 221 aa7.07□□□□□ -1.28
SHE9YDR393W RAD55P38953 406 aa7.06□□□□□ -1.28
SHE9YDR393W SPO71Q03868 1245 aa7.06□□□□□ -1.28
SHE9YDR393W MAG2Q06436 670 aaKnown RBP7.06□□□□□ -1.28
SHE9YDR393W ELG1Q12050 791 aa7.06□□□□□ -1.28
SHE9YDR393W LSO1Q3E827 93 aa7.06□□□□□ -1.28
SHE9YDR393W CYC7P00045 113 aa7.05□□□□□ -1.28
SHE9YDR393W YJR124CP47159 448 aa7.05□□□□□ -1.28
SHE9YDR393W YNR065CP53751 1116 aa7.05□□□□□ -1.28
SHE9YDR393W HVG1P0CE11 249 aa7.04□□□□□ -1.28
SHE9YDR393W ERS1P17261 260 aa7.04□□□□□ -1.28
SHE9YDR393W NEO1P40527 1151 aa7.04□□□□□ -1.28
SHE9YDR393W PSY2P40164 858 aa7.03□□□□□ -1.28
SHE9YDR393W IRS4P36115 615 aaKnown RBP7.02□□□□□ -1.29
SHE9YDR393W HAS1Q03532 505 aaKnown RBP7.02□□□□□ -1.29
SHE9YDR393W GLO4Q12320 285 aa7.02□□□□□ -1.29
SHE9YDR393W SMC1P32908 1225 aa7.01□□□□□ -1.29
SHE9YDR393W BOL3P39724 118 aa7.01□□□□□ -1.29
SHE9YDR393W MSB1P21339 1137 aaKnown RBP7□□□□□ -1.29
SHE9YDR393W PYC2P32327 1180 aaKnown RBP7□□□□□ -1.29
SHE9YDR393W ELM1P32801 640 aa6.99□□□□□ -1.29
SHE9YDR393W KIP3P53086 805 aaKnown RBP6.99□□□□□ -1.29
SHE9YDR393W AOS1Q06624 347 aa6.99□□□□□ -1.29
SHE9YDR393W SEA4P38164 1038 aa6.98□□□□□ -1.29
SHE9YDR393W FUR4P05316 633 aaKnown RBP6.97□□□□□ -1.29
SHE9YDR393W FET4P40988 552 aa6.96□□□□□ -1.29
SHE9YDR393W GIC2Q06648 383 aa6.96□□□□□ -1.29
SHE9YDR393W SDH1Q00711 640 aa6.95□□□□□ -1.3
SHE9YDR393W FAR11P53917 953 aa6.94□□□□□ -1.3
SHE9YDR393W CTR9P89105 1077 aa6.94□□□□□ -1.3
SHE9YDR393W GCD1P09032 578 aaPredicted RBP6.93□□□□□ -1.3
SHE9YDR393W SUB2Q07478 446 aaKnown RBP6.92□□□□□ -1.3
SHE9YDR393W YOR223WQ12015 292 aa6.92□□□□□ -1.3
SHE9YDR393W COBP00163 385 aa6.91□□□□□ -1.3
SHE9YDR393W YMR074CQ04773 145 aa6.89□□□□□ -1.31
SHE9YDR393W LRG1P35688 1017 aa6.88□□□□□ -1.31
SHE9YDR393W GPT2P36148 743 aa6.88□□□□□ -1.31
SHE9YDR393W MMM1P41800 426 aa6.88□□□□□ -1.31
SHE9YDR393W RNQ1P25367 405 aa6.87□□□□□ -1.31
SHE9YDR393W WHI3P34761 661 aaKnown RBP6.87□□□□□ -1.31
SHE9YDR393W RIM11P38615 370 aa6.86□□□□□ -1.31
SHE9YDR393W RSC4Q02206 625 aa6.86□□□□□ -1.31
SHE9YDR393W YIG1Q08956 461 aa6.86□□□□□ -1.31
SHE9YDR393W CMR1Q12510 522 aaKnown RBP6.86□□□□□ -1.31
SHE9YDR393W DUR3P33413 735 aa6.85□□□□□ -1.31
SHE9YDR393W SEG2P34250 1132 aa6.85□□□□□ -1.31
SHE9YDR393W GLO3P38682 493 aaKnown RBP6.85□□□□□ -1.31
SHE9YDR393W CIT3P43635 486 aa6.85□□□□□ -1.31
SHE9YDR393W GCV1P48015 400 aa6.85□□□□□ -1.31
SHE9YDR393W DOT1Q04089 582 aaKnown RBP6.85□□□□□ -1.31
SHE9YDR393W NPR1P22211 790 aa6.84□□□□□ -1.31
SHE9YDR393W POL12P38121 705 aaPredicted RBP6.84□□□□□ -1.31
SHE9YDR393W QDR1P40475 563 aa6.84□□□□□ -1.31
SHE9YDR393W UFD2P54860 961 aa6.84□□□□□ -1.31
SHE9YDR393W HTS1P07263 546 aaKnown RBP6.83□□□□□ -1.32
SHE9YDR393W KAR5Q04746 504 aa6.83□□□□□ -1.32
SHE9YDR393W UBP5P39944 805 aa6.82□□□□□ -1.32
SHE9YDR393W YLL054CQ12244 843 aa6.82□□□□□ -1.32
SHE9YDR393W DFG16Q99234 619 aa6.82□□□□□ -1.32
SHE9YDR393W PRP5P21372 849 aaPredicted RBP6.82□□□□□ -1.32
SHE9YDR393W ECL1P48235 211 aa6.81□□□□□ -1.32
SHE9YDR393W MSH6Q03834 1242 aa6.81□□□□□ -1.32
SHE9YDR393W NIT1P40447 199 aa6.8□□□□□ -1.32
SHE9YDR393W ATG1P53104 897 aa6.8□□□□□ -1.32
SHE9YDR393W RCM1P53972 490 aa6.8□□□□□ -1.32
SHE9YDR393W YOR059CQ08448 450 aaKnown RBP6.8□□□□□ -1.32
SHE9YDR393W NSI1Q12457 570 aa6.8□□□□□ -1.32
SHE9YDR393W ECM2P38241 364 aaKnown RBP6.79□□□□□ -1.32
SHE9YDR393W OYE3P41816 400 aaPredicted RBP6.79□□□□□ -1.32
SHE9YDR393W MEC3Q02574 474 aa6.79□□□□□ -1.32
SHE9YDR393W RLF2Q12495 606 aa6.78□□□□□ -1.32
SHE9YDR393W RPS4AP0CX35 261 aaKnown RBP6.77□□□□□ -1.33
SHE9YDR393W RPS4BP0CX36 261 aaKnown RBP6.77□□□□□ -1.33
SHE9YDR393W MNL2Q12205 849 aa6.77□□□□□ -1.33
SHE9YDR393W HSP78P33416 811 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms