RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS23, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS23YDR246W CUS1Q02554 436 aaPredicted RBP7.05□□□□□ -1.28
TRS23YDR246W RPA190P10964 1664 aaKnown RBP7.05□□□□□ -1.28
TRS23YDR246W GEF1P37020 779 aa7.04□□□□□ -1.28
TRS23YDR246W RPO21P04050 1733 aaKnown RBP7.04□□□□□ -1.28
TRS23YDR246W DNF1P32660 1571 aa7.03□□□□□ -1.28
TRS23YDR246W DYS1P38791 387 aa7.03□□□□□ -1.28
TRS23YDR246W IRC20Q06554 1556 aa7.03□□□□□ -1.28
TRS23YDR246W FUR4P05316 633 aaKnown RBP7.02□□□□□ -1.29
TRS23YDR246W RPC31P17890 251 aa7.02□□□□□ -1.29
TRS23YDR246W SKP1P52286 194 aa7.02□□□□□ -1.29
TRS23YDR246W LDH1P38139 375 aa7.01□□□□□ -1.29
TRS23YDR246W NCL1P38205 684 aaKnown RBP7.01□□□□□ -1.29
TRS23YDR246W BOL3P39724 118 aa7□□□□□ -1.29
TRS23YDR246W KAR5Q04746 504 aa7□□□□□ -1.29
TRS23YDR246W VPS15P22219 1454 aa6.99□□□□□ -1.29
TRS23YDR246W GEA2P39993 1459 aaKnown RBP6.99□□□□□ -1.29
TRS23YDR246W MSC7P38694 644 aa6.99□□□□□ -1.29
TRS23YDR246W TY1A-DR2Q03964 440 aaKnown RBP6.99□□□□□ -1.29
TRS23YDR246W YOR296WQ08748 1289 aa6.99□□□□□ -1.29
TRS23YDR246W BOI1P38041 980 aaKnown RBP6.98□□□□□ -1.29
TRS23YDR246W APM2P38700 605 aa6.98□□□□□ -1.29
TRS23YDR246W HEH2Q03281 663 aa6.98□□□□□ -1.29
TRS23YDR246W GPM1P00950 247 aaKnown RBP6.97□□□□□ -1.29
TRS23YDR246W CDC3P32457 520 aaKnown RBP6.97□□□□□ -1.29
TRS23YDR246W BSD2P38356 321 aa6.97□□□□□ -1.29
TRS23YDR246W LSO1Q3E827 93 aa6.97□□□□□ -1.29
TRS23YDR246W AI1P03875 834 aa6.96□□□□□ -1.3
TRS23YDR246W GIP1P38229 639 aa6.96□□□□□ -1.3
TRS23YDR246W SUT1P53032 299 aaKnown RBP6.96□□□□□ -1.3
TRS23YDR246W YNR040WP53736 256 aa6.96□□□□□ -1.3
TRS23YDR246W CAT8P39113 1433 aa6.95□□□□□ -1.3
TRS23YDR246W PDC5P16467 563 aaKnown RBP6.95□□□□□ -1.3
TRS23YDR246W RPB10P22139 70 aa6.95□□□□□ -1.3
TRS23YDR246W ISW1P38144 1129 aa6.95□□□□□ -1.3
TRS23YDR246W HXT8P40886 569 aa6.95□□□□□ -1.3
TRS23YDR246W APC11Q12157 165 aa6.95□□□□□ -1.3
TRS23YDR246W MSN1P22148 382 aa6.94□□□□□ -1.3
TRS23YDR246W KNS1P32350 737 aaPredicted RBP6.94□□□□□ -1.3
TRS23YDR246W NAB2P32505 525 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
TRS23YDR246W GLO3P38682 493 aaKnown RBP6.94□□□□□ -1.3
TRS23YDR246W ITC1P53125 1264 aa6.94□□□□□ -1.3
TRS23YDR246W NUP159P40477 1460 aa6.93□□□□□ -1.3
TRS23YDR246W GDB1Q06625 1536 aa6.93□□□□□ -1.3
TRS23YDR246W FIR1P40020 876 aa6.93□□□□□ -1.3
TRS23YDR246W PRK1P40494 810 aa6.93□□□□□ -1.3
TRS23YDR246W NSG2P53898 299 aa6.92□□□□□ -1.3
TRS23YDR246W THI72Q08579 599 aa6.92□□□□□ -1.3
TRS23YDR246W YRF1-1P0CX20 1796 aa6.92□□□□□ -1.3
TRS23YDR246W YRF1-5P0CX21 1796 aa6.92□□□□□ -1.3
TRS23YDR246W YRF1-8P0CX22 1796 aa6.92□□□□□ -1.3
TRS23YDR246W ARO1P08566 1588 aaKnown RBP6.91□□□□□ -1.3
TRS23YDR246W SPO14P36126 1683 aa6.91□□□□□ -1.3
TRS23YDR246W KTR2P33550 425 aa6.91□□□□□ -1.3
TRS23YDR246W QDR1P40475 563 aa6.91□□□□□ -1.3
TRS23YDR246W ATG1P53104 897 aa6.91□□□□□ -1.3
TRS23YDR246W IDI1P15496 288 aa6.9□□□□□ -1.3
TRS23YDR246W YBR287WP38355 427 aa6.9□□□□□ -1.3
TRS23YDR246W YER156CP40093 338 aaKnown RBP6.9□□□□□ -1.3
TRS23YDR246W YNR014WP53719 212 aa6.9□□□□□ -1.3
TRS23YDR246W PDR10P51533 1564 aa6.9□□□□□ -1.31
TRS23YDR246W SMC1P32908 1225 aa6.89□□□□□ -1.31
TRS23YDR246W MDJ1P35191 511 aa6.89□□□□□ -1.31
TRS23YDR246W SBE2P42223 864 aaKnown RBP6.89□□□□□ -1.31
TRS23YDR246W HAT1Q12341 374 aa6.89□□□□□ -1.31
TRS23YDR246W PDR12Q02785 1511 aa6.88□□□□□ -1.31
TRS23YDR246W SRB8P25648 1427 aa6.88□□□□□ -1.31
TRS23YDR246W MET1P36150 593 aa6.88□□□□□ -1.31
TRS23YDR246W PHM7Q12252 991 aa6.88□□□□□ -1.31
TRS23YDR246W RAD55P38953 406 aa6.87□□□□□ -1.31
TRS23YDR246W YIL165CP40446 119 aa6.87□□□□□ -1.31
TRS23YDR246W YFL066CP43538 392 aa6.87□□□□□ -1.31
TRS23YDR246W RGD2P43556 714 aa6.87□□□□□ -1.31
TRS23YDR246W RSC2Q06488 889 aa6.87□□□□□ -1.31
TRS23YDR246W YBL113CQ7M4S9 792 aa6.87□□□□□ -1.31
TRS23YDR246W GCN2P15442 1659 aa6.87□□□□□ -1.31
TRS23YDR246W BUD3P25558 1636 aa6.87□□□□□ -1.31
TRS23YDR246W GRS1P38088 690 aaKnown RBP6.86□□□□□ -1.31
TRS23YDR246W AIM46P38885 310 aa6.86□□□□□ -1.31
TRS23YDR246W BOI2P39969 1040 aa6.86□□□□□ -1.31
TRS23YDR246W NTA1P40354 457 aa6.86□□□□□ -1.31
TRS23YDR246W ERP5P38819 212 aa6.85□□□□□ -1.31
TRS23YDR246W ICP55P40051 511 aa6.85□□□□□ -1.31
TRS23YDR246W PPT1P53043 513 aa6.85□□□□□ -1.31
TRS23YDR246W EMG1Q06287 252 aaKnown RBP6.85□□□□□ -1.31
TRS23YDR246W TDA6Q06466 467 aa6.85□□□□□ -1.31
TRS23YDR246W PUS1Q12211 544 aaKnown RBP6.85□□□□□ -1.31
TRS23YDR246W NUP157P40064 1391 aaKnown RBP6.84□□□□□ -1.31
TRS23YDR246W ALG14P38242 237 aa6.84□□□□□ -1.31
TRS23YDR246W ACF4P47129 309 aa6.84□□□□□ -1.31
TRS23YDR246W UFD2P54860 961 aa6.84□□□□□ -1.31
TRS23YDR246W TIF6Q12522 245 aaKnown RBP6.84□□□□□ -1.31
TRS23YDR246W MRP10O75012 95 aa6.83□□□□□ -1.32
TRS23YDR246W TRL1P09880 827 aaKnown RBP6.83□□□□□ -1.32
TRS23YDR246W IRS4P36115 615 aaKnown RBP6.83□□□□□ -1.32
TRS23YDR246W PGM2P37012 569 aaKnown RBP6.83□□□□□ -1.32
TRS23YDR246W YJL181WP46987 611 aa6.83□□□□□ -1.32
TRS23YDR246W NAR1P23503 491 aaKnown RBP6.82□□□□□ -1.32
TRS23YDR246W MET10P39692 1035 aa6.82□□□□□ -1.32
TRS23YDR246W PSY2P40164 858 aa6.82□□□□□ -1.32
TRS23YDR246W GIS4Q04233 774 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms