RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	FUS1	P11710	512 aa		5.03	□□□□□ -1.6
SWF1	YDR126W	TFA2	P36145	328 aa		5.03	□□□□□ -1.6
SWF1	YDR126W	BOI1	P38041	980 aa	Known RBP	5.03	□□□□□ -1.6
SWF1	YDR126W	PAN5	P38787	379 aa		5.03	□□□□□ -1.6
SWF1	YDR126W	MED7	Q08278	222 aa		5.03	□□□□□ -1.6
SWF1	YDR126W	YKR073C	P36153	106 aa		5.02	□□□□□ -1.61
SWF1	YDR126W	SUT1	P53032	299 aa	Known RBP	5.02	□□□□□ -1.61
SWF1	YDR126W	TRP3	P00937	484 aa		5.01	□□□□□ -1.61
SWF1	YDR126W	REC8	Q12188	680 aa		5.01	□□□□□ -1.61
SWF1	YDR126W	CHS2	P14180	963 aa		5	□□□□□ -1.61
SWF1	YDR126W	RPB10	P22139	70 aa		5	□□□□□ -1.61
SWF1	YDR126W	SMC1	P32908	1225 aa		5	□□□□□ -1.61
SWF1	YDR126W	RAD55	P38953	406 aa		5	□□□□□ -1.61
SWF1	YDR126W	POL5	P39985	1022 aa	Known RBP	5	□□□□□ -1.61
SWF1	YDR126W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
SWF1	YDR126W	FUR4	P05316	633 aa	Known RBP	4.99	□□□□□ -1.61
SWF1	YDR126W	MAE1	P36013	669 aa	Known RBP	4.99	□□□□□ -1.61
SWF1	YDR126W	IRS4	P36115	615 aa	Known RBP	4.99	□□□□□ -1.61
SWF1	YDR126W	AKR1	P39010	764 aa		4.99	□□□□□ -1.61
SWF1	YDR126W	SPO71	Q03868	1245 aa		4.99	□□□□□ -1.61
SWF1	YDR126W	TIF6	Q12522	245 aa	Known RBP	4.99	□□□□□ -1.61
SWF1	YDR126W	TOS1	P38288	455 aa		4.98	□□□□□ -1.61
SWF1	YDR126W	PSY2	P40164	858 aa		4.98	□□□□□ -1.61
SWF1	YDR126W	HVG1	P0CE11	249 aa		4.97	□□□□□ -1.61
SWF1	YDR126W	NAM7	P30771	971 aa	Known RBP	4.97	□□□□□ -1.61
SWF1	YDR126W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SWF1	YDR126W	BOL3	P39724	118 aa		4.97	□□□□□ -1.61
SWF1	YDR126W	IRC24	P40580	263 aa		4.97	□□□□□ -1.61
SWF1	YDR126W	NCE103	P53615	221 aa		4.97	□□□□□ -1.61
SWF1	YDR126W	ELG1	Q12050	791 aa		4.97	□□□□□ -1.61
SWF1	YDR126W	NEO1	P40527	1151 aa		4.96	□□□□□ -1.62
SWF1	YDR126W	SPO74	P45819	413 aa		4.96	□□□□□ -1.62
SWF1	YDR126W	YJR124C	P47159	448 aa		4.96	□□□□□ -1.62
SWF1	YDR126W	YGR130C	P53278	816 aa		4.96	□□□□□ -1.62
SWF1	YDR126W	YNR065C	P53751	1116 aa		4.96	□□□□□ -1.62
SWF1	YDR126W	SUB2	Q07478	446 aa	Known RBP	4.96	□□□□□ -1.62
SWF1	YDR126W	GLO4	Q12320	285 aa		4.96	□□□□□ -1.62
SWF1	YDR126W	LIP5	P32875	414 aa		4.95	□□□□□ -1.62
SWF1	YDR126W	CTH1	P47976	325 aa		4.95	□□□□□ -1.62
SWF1	YDR126W	HAS1	Q03532	505 aa	Known RBP	4.95	□□□□□ -1.62
SWF1	YDR126W	RLF2	Q12495	606 aa		4.95	□□□□□ -1.62
SWF1	YDR126W	MSB1	P21339	1137 aa	Known RBP	4.94	□□□□□ -1.62
SWF1	YDR126W	PYC2	P32327	1180 aa	Known RBP	4.94	□□□□□ -1.62
SWF1	YDR126W	FET4	P40988	552 aa		4.94	□□□□□ -1.62
SWF1	YDR126W	BRE4	Q07660	1125 aa		4.94	□□□□□ -1.62
SWF1	YDR126W	CYC7	P00045	113 aa		4.93	□□□□□ -1.62
SWF1	YDR126W	ERS1	P17261	260 aa		4.93	□□□□□ -1.62
SWF1	YDR126W	FAR11	P53917	953 aa		4.93	□□□□□ -1.62
SWF1	YDR126W	MAG2	Q06436	670 aa	Known RBP	4.93	□□□□□ -1.62
SWF1	YDR126W	AVT1	P47082	602 aa		4.92	□□□□□ -1.62
SWF1	YDR126W	KIP3	P53086	805 aa	Known RBP	4.92	□□□□□ -1.62
SWF1	YDR126W	UFD2	P54860	961 aa		4.91	□□□□□ -1.62
SWF1	YDR126W	CTR9	P89105	1077 aa		4.9	□□□□□ -1.63
SWF1	YDR126W	AOS1	Q06624	347 aa		4.9	□□□□□ -1.63
SWF1	YDR126W	GIC2	Q06648	383 aa		4.9	□□□□□ -1.63
SWF1	YDR126W	ELM1	P32801	640 aa		4.89	□□□□□ -1.63
SWF1	YDR126W	RSC4	Q02206	625 aa		4.89	□□□□□ -1.63
SWF1	YDR126W	YOR223W	Q12015	292 aa		4.89	□□□□□ -1.63
SWF1	YDR126W	GLO3	P38682	493 aa	Known RBP	4.88	□□□□□ -1.63
SWF1	YDR126W	QDR1	P40475	563 aa		4.88	□□□□□ -1.63
SWF1	YDR126W	ATG1	P53104	897 aa		4.88	□□□□□ -1.63
SWF1	YDR126W	RPL34A	P87262	121 aa	Predicted RBP	4.88	□□□□□ -1.63
SWF1	YDR126W	KAR5	Q04746	504 aa		4.88	□□□□□ -1.63
SWF1	YDR126W	YLL054C	Q12244	843 aa		4.88	□□□□□ -1.63
SWF1	YDR126W	RIM11	P38615	370 aa		4.87	□□□□□ -1.63
SWF1	YDR126W	GCV1	P48015	400 aa		4.87	□□□□□ -1.63
SWF1	YDR126W	YMR074C	Q04773	145 aa		4.87	□□□□□ -1.63
SWF1	YDR126W	COB	P00163	385 aa		4.86	□□□□□ -1.63
SWF1	YDR126W	ACF4	P47129	309 aa		4.86	□□□□□ -1.63
SWF1	YDR126W	YIG1	Q08956	461 aa		4.86	□□□□□ -1.63
SWF1	YDR126W	PRP5	P21372	849 aa	Predicted RBP	4.85	□□□□□ -1.63
SWF1	YDR126W	ECM2	P38241	364 aa	Known RBP	4.85	□□□□□ -1.63
SWF1	YDR126W	MMM1	P41800	426 aa		4.85	□□□□□ -1.63
SWF1	YDR126W	MSH6	Q03834	1242 aa		4.85	□□□□□ -1.63
SWF1	YDR126W	CMR1	Q12510	522 aa	Known RBP	4.85	□□□□□ -1.63
SWF1	YDR126W	HTS1	P07263	546 aa	Known RBP	4.84	□□□□□ -1.63
SWF1	YDR126W	NPR1	P22211	790 aa		4.84	□□□□□ -1.63
SWF1	YDR126W	GPT2	P36148	743 aa		4.84	□□□□□ -1.63
SWF1	YDR126W	DOT1	Q04089	582 aa	Known RBP	4.84	□□□□□ -1.63
SWF1	YDR126W	TRS120	Q04183	1289 aa		4.84	□□□□□ -1.63
SWF1	YDR126W	GCD1	P09032	578 aa	Predicted RBP	4.83	□□□□□ -1.64
SWF1	YDR126W	DUR3	P33413	735 aa		4.83	□□□□□ -1.64
SWF1	YDR126W	SEA4	P38164	1038 aa		4.83	□□□□□ -1.64
SWF1	YDR126W	CIT3	P43635	486 aa		4.83	□□□□□ -1.64
SWF1	YDR126W	YNL011C	P53980	444 aa		4.83	□□□□□ -1.64
SWF1	YDR126W	SDH1	Q00711	640 aa		4.83	□□□□□ -1.64
SWF1	YDR126W	YOR059C	Q08448	450 aa	Known RBP	4.83	□□□□□ -1.64
SWF1	YDR126W	NSI1	Q12457	570 aa		4.83	□□□□□ -1.64
SWF1	YDR126W	WHI3	P34761	661 aa	Known RBP	4.82	□□□□□ -1.64
SWF1	YDR126W	SAP155	P43612	1002 aa		4.82	□□□□□ -1.64
SWF1	YDR126W	MEC3	Q02574	474 aa		4.82	□□□□□ -1.64
SWF1	YDR126W	BSC2	Q05611	235 aa		4.82	□□□□□ -1.64
SWF1	YDR126W	UTP22	P53254	1237 aa	Predicted RBP	4.81	□□□□□ -1.64
SWF1	YDR126W	CDC55	Q00362	526 aa		4.81	□□□□□ -1.64
SWF1	YDR126W	MNL2	Q12205	849 aa		4.81	□□□□□ -1.64
SWF1	YDR126W	FLP1	P03870	423 aa		4.8	□□□□□ -1.64
SWF1	YDR126W	SSA1	P10591	642 aa	Known RBP	4.8	□□□□□ -1.64
SWF1	YDR126W	ECL1	P48235	211 aa		4.8	□□□□□ -1.64
SWF1	YDR126W	TRL1	P09880	827 aa	Known RBP	4.79	□□□□□ -1.64
SWF1	YDR126W	LRG1	P35688	1017 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 159.5 ms