RNA–Protein interactions for RNA: YDL110C

TMA17, Transcript of ATPase dedicated chaperone that adapts proteasome assembly to stress, yeast

Gene TMA17, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA17	YDL110C	SNU71	P53207	620 aa	Known RBP	4.99	□□□□□ -1.61
TMA17	YDL110C	ULP1	Q02724	621 aa		4.99	□□□□□ -1.61
TMA17	YDL110C	YDL124W	Q07551	312 aa	Known RBP	4.99	□□□□□ -1.61
TMA17	YDL110C	VPS13	Q07878	3144 aa		4.99	□□□□□ -1.61
TMA17	YDL110C	FBP1	P09201	348 aa		4.98	□□□□□ -1.61
TMA17	YDL110C	YMR147W	P40218	223 aa	Known RBP	4.98	□□□□□ -1.61
TMA17	YDL110C	YGL242C	P53066	181 aa		4.98	□□□□□ -1.61
TMA17	YDL110C	KEL3	Q08979	651 aa	Predicted RBP	4.98	□□□□□ -1.61
TMA17	YDL110C	CFT2	Q12102	859 aa	Predicted RBP	4.98	□□□□□ -1.61
TMA17	YDL110C	NOT3	P06102	836 aa	Known RBP	4.97	□□□□□ -1.61
TMA17	YDL110C	RAD2	P07276	1031 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	MPH3	P0CE00	602 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	KRS1	P15180	591 aa	Known RBP	4.97	□□□□□ -1.61
TMA17	YDL110C	MCD4	P36051	919 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	CST26	P38226	397 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	YHL050C	P38721	697 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	LYS14	P40971	790 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	PRY3	P47033	881 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	ALO1	P54783	526 aa	Known RBP	4.97	□□□□□ -1.61
TMA17	YDL110C	KAR5	Q04746	504 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	TY3A-G	Q12173	290 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	NCB2	Q92317	146 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	TY3A-I	Q99219	290 aa		4.97	□□□□□ -1.61
TMA17	YDL110C	SPB4	P25808	606 aa	Predicted RBP	4.96	□□□□□ -1.62
TMA17	YDL110C	GEF1	P37020	779 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	ECM21	P38167	1117 aa	Known RBP	4.96	□□□□□ -1.62
TMA17	YDL110C	VAB2	P40003	282 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	YJL007C	P47080	104 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	ATG1	P53104	897 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	VPS62	P53285	467 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	UBX5	Q06682	500 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	LAP2	Q10740	671 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	ICL2	Q12031	575 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	PDR18	P53756	1333 aa		4.96	□□□□□ -1.62
TMA17	YDL110C	SRS2	P12954	1174 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	PRE8	P23639	250 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	PRS1	P32895	427 aa	Known RBP	4.95	□□□□□ -1.62
TMA17	YDL110C	NPL4	P33755	580 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	YKR023W	P36119	530 aa	Known RBP	4.95	□□□□□ -1.62
TMA17	YDL110C	NMD2	P38798	1089 aa	Known RBP	4.95	□□□□□ -1.62
TMA17	YDL110C	FUN12	P39730	1002 aa	Known RBP	4.95	□□□□□ -1.62
TMA17	YDL110C	IRC8	P47046	822 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	POL32	P47110	350 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	MLC1	P53141	149 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	PIB2	P53191	635 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	YML037C	Q03703	340 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	PUF6	Q04373	656 aa	Known RBP	4.95	□□□□□ -1.62
TMA17	YDL110C	YPL260W	Q08977	551 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	LAM4	P38800	1345 aa		4.95	□□□□□ -1.62
TMA17	YDL110C	DIT2	P21595	489 aa		4.94	□□□□□ -1.62
TMA17	YDL110C	SRM1	P21827	482 aa		4.94	□□□□□ -1.62
TMA17	YDL110C	EUG1	P32474	517 aa		4.94	□□□□□ -1.62
TMA17	YDL110C	LDH1	P38139	375 aa		4.94	□□□□□ -1.62
TMA17	YDL110C	AFG3	P39925	761 aa		4.94	□□□□□ -1.62
TMA17	YDL110C	IOC3	P43596	787 aa		4.94	□□□□□ -1.62
TMA17	YDL110C	SKG3	Q06315	1026 aa		4.94	□□□□□ -1.62
TMA17	YDL110C	SUB2	Q07478	446 aa	Known RBP	4.94	□□□□□ -1.62
TMA17	YDL110C	PER1	P25625	357 aa		4.93	□□□□□ -1.62
TMA17	YDL110C	CHS3	P29465	1165 aa		4.93	□□□□□ -1.62
TMA17	YDL110C	BBC1	P47068	1157 aa		4.93	□□□□□ -1.62
TMA17	YDL110C	MRPS35	P53292	345 aa		4.93	□□□□□ -1.62
TMA17	YDL110C	BRE5	P53741	515 aa	Known RBP	4.93	□□□□□ -1.62
TMA17	YDL110C	ECM30	Q06673	1274 aa		4.93	□□□□□ -1.62
TMA17	YDL110C	TUS1	Q06412	1307 aa		4.93	□□□□□ -1.62
TMA17	YDL110C	ERG12	P07277	443 aa		4.92	□□□□□ -1.62
TMA17	YDL110C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
TMA17	YDL110C	PKC1	P24583	1151 aa		4.92	□□□□□ -1.62
TMA17	YDL110C	PRO3	P32263	286 aa	Known RBP	4.92	□□□□□ -1.62
TMA17	YDL110C	BCS1	P32839	456 aa		4.92	□□□□□ -1.62
TMA17	YDL110C	PBY1	P38254	753 aa		4.92	□□□□□ -1.62
TMA17	YDL110C	CLA4	P48562	842 aa		4.92	□□□□□ -1.62
TMA17	YDL110C	PKH3	Q03306	898 aa	Predicted RBP	4.92	□□□□□ -1.62
TMA17	YDL110C	DUS4	Q06063	367 aa		4.92	□□□□□ -1.62
TMA17	YDL110C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
TMA17	YDL110C	YOR131C	Q12486	218 aa		4.92	□□□□□ -1.62
TMA17	YDL110C	CHO2	P05374	869 aa	Known RBP	4.91	□□□□□ -1.62
TMA17	YDL110C	VMA2	P16140	517 aa	Known RBP	4.91	□□□□□ -1.62
TMA17	YDL110C	COQ1	P18900	473 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	SAM2	P19358	384 aa	Known RBP	4.91	□□□□□ -1.62
TMA17	YDL110C	OSH3	P38713	996 aa	Known RBP	4.91	□□□□□ -1.62
TMA17	YDL110C	RTS1	P38903	757 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	GPB2	P39717	880 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	FIR1	P40020	876 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	MXR1	P40029	184 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	VID27	P40157	782 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	YVH1	Q02256	364 aa	Known RBP	4.91	□□□□□ -1.62
TMA17	YDL110C	RMD1	Q03441	430 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	MET7	Q08645	548 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	SUT2	Q12286	268 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	MDM20	Q12387	796 aa	Known RBP	4.91	□□□□□ -1.62
TMA17	YDL110C	RAD61	Q99359	647 aa		4.91	□□□□□ -1.62
TMA17	YDL110C	CDC16	P09798	840 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	UTR4	P32626	227 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	RGT1	P32862	1170 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	DLD1	P32891	587 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	TFA1	P36100	482 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	UIP5	P36137	443 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	PHO88	P38264	188 aa	Predicted RBP	4.9	□□□□□ -1.63
TMA17	YDL110C	AIM21	P40563	679 aa		4.9	□□□□□ -1.63
TMA17	YDL110C	ENP2	P48234	707 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms