RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C PSY2P40164 858 aa5.44□□□□□ -1.54
ASM4YDL088C GUP1P53154 560 aa5.44□□□□□ -1.54
ASM4YDL088C BIO5P53744 561 aaKnown RBP5.44□□□□□ -1.54
ASM4YDL088C FUS1P11710 512 aa5.43□□□□□ -1.54
ASM4YDL088C ALO1P54783 526 aaKnown RBP5.43□□□□□ -1.54
ASM4YDL088C PAN5P38787 379 aa5.42□□□□□ -1.54
ASM4YDL088C NEO1P40527 1151 aa5.42□□□□□ -1.54
ASM4YDL088C LEM3P42838 414 aa5.42□□□□□ -1.54
ASM4YDL088C ALD3P54114 506 aa5.42□□□□□ -1.54
ASM4YDL088C SSA1P10591 642 aaKnown RBP5.42□□□□□ -1.54
ASM4YDL088C SOG2Q08817 791 aa5.42□□□□□ -1.54
ASM4YDL088C TY1A-NL1Q12391 440 aaKnown RBP5.42□□□□□ -1.54
ASM4YDL088C TFA2P36145 328 aa5.41□□□□□ -1.54
ASM4YDL088C QDR1P40475 563 aa5.41□□□□□ -1.54
ASM4YDL088C KAE1P36132 386 aa5.4□□□□□ -1.55
ASM4YDL088C OMA1P36163 345 aa5.4□□□□□ -1.55
ASM4YDL088C SPO71Q03868 1245 aa5.4□□□□□ -1.55
ASM4YDL088C MAE1P36013 669 aaKnown RBP5.39□□□□□ -1.55
ASM4YDL088C YJR124CP47159 448 aa5.39□□□□□ -1.55
ASM4YDL088C PYC2P32327 1180 aaKnown RBP5.38□□□□□ -1.55
ASM4YDL088C PGM1P33401 570 aaKnown RBP5.38□□□□□ -1.55
ASM4YDL088C ECM2P38241 364 aaKnown RBP5.38□□□□□ -1.55
ASM4YDL088C AKR1P39010 764 aa5.38□□□□□ -1.55
ASM4YDL088C UFD2P54860 961 aa5.38□□□□□ -1.55
ASM4YDL088C POL5P39985 1022 aaKnown RBP5.37□□□□□ -1.55
ASM4YDL088C ATG1P53104 897 aa5.37□□□□□ -1.55
ASM4YDL088C YNR065CP53751 1116 aa5.37□□□□□ -1.55
ASM4YDL088C ELG1Q12050 791 aa5.37□□□□□ -1.55
ASM4YDL088C CHS2P14180 963 aa5.36□□□□□ -1.55
ASM4YDL088C NAM7P30771 971 aaKnown RBP5.36□□□□□ -1.55
ASM4YDL088C SAF1P38352 637 aa5.36□□□□□ -1.55
ASM4YDL088C FET4P40988 552 aa5.36□□□□□ -1.55
ASM4YDL088C MED7Q08278 222 aa5.36□□□□□ -1.55
ASM4YDL088C REC8Q12188 680 aa5.36□□□□□ -1.55
ASM4YDL088C YLR122CQ12312 125 aa5.36□□□□□ -1.55
ASM4YDL088C GLO4Q12320 285 aa5.36□□□□□ -1.55
ASM4YDL088C GLT1Q12680 2145 aaKnown RBP5.35□□□□□ -1.55
ASM4YDL088C CDC3P32457 520 aaKnown RBP5.35□□□□□ -1.55
ASM4YDL088C YMR074CQ04773 145 aa5.35□□□□□ -1.55
ASM4YDL088C ACF4P47129 309 aa5.34□□□□□ -1.55
ASM4YDL088C HAS1Q03532 505 aaKnown RBP5.34□□□□□ -1.55
ASM4YDL088C GEF1P37020 779 aa5.33□□□□□ -1.56
ASM4YDL088C GRS1P38088 690 aaKnown RBP5.33□□□□□ -1.56
ASM4YDL088C YGR130CP53278 816 aa5.33□□□□□ -1.56
ASM4YDL088C FAR11P53917 953 aa5.33□□□□□ -1.56
ASM4YDL088C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
ASM4YDL088C TRP3P00937 484 aa5.33□□□□□ -1.56
ASM4YDL088C ERS1P17261 260 aa5.33□□□□□ -1.56
ASM4YDL088C KIP3P53086 805 aaKnown RBP5.33□□□□□ -1.56
ASM4YDL088C TRS120Q04183 1289 aa5.33□□□□□ -1.56
ASM4YDL088C LIP5P32875 414 aa5.32□□□□□ -1.56
ASM4YDL088C INP52P50942 1183 aa5.32□□□□□ -1.56
ASM4YDL088C NCE103P53615 221 aa5.32□□□□□ -1.56
ASM4YDL088C YNL011CP53980 444 aa5.32□□□□□ -1.56
ASM4YDL088C RSC4Q02206 625 aa5.32□□□□□ -1.56
ASM4YDL088C HVG1P0CE11 249 aa5.31□□□□□ -1.56
ASM4YDL088C TOS1P38288 455 aa5.31□□□□□ -1.56
ASM4YDL088C CTR9P89105 1077 aa5.31□□□□□ -1.56
ASM4YDL088C YKR073CP36153 106 aa5.3□□□□□ -1.56
ASM4YDL088C YHL008CP38750 627 aa5.3□□□□□ -1.56
ASM4YDL088C BSC2Q05611 235 aa5.3□□□□□ -1.56
ASM4YDL088C HAT1Q12341 374 aa5.3□□□□□ -1.56
ASM4YDL088C YBL113CQ7M4S9 792 aa5.3□□□□□ -1.56
ASM4YDL088C ERP5P38819 212 aa5.29□□□□□ -1.56
ASM4YDL088C YLL054CQ12244 843 aa5.29□□□□□ -1.56
ASM4YDL088C GIC2Q06648 383 aa5.29□□□□□ -1.56
ASM4YDL088C CYC7P00045 113 aa5.28□□□□□ -1.56
ASM4YDL088C TRL1P09880 827 aaKnown RBP5.28□□□□□ -1.56
ASM4YDL088C NPR1P22211 790 aa5.28□□□□□ -1.56
ASM4YDL088C SPO74P45819 413 aa5.28□□□□□ -1.56
ASM4YDL088C CDC55Q00362 526 aa5.28□□□□□ -1.56
ASM4YDL088C YOR223WQ12015 292 aa5.28□□□□□ -1.56
ASM4YDL088C COBP00163 385 aa5.27□□□□□ -1.57
ASM4YDL088C MSB1P21339 1137 aaKnown RBP5.27□□□□□ -1.57
ASM4YDL088C CMR1Q12510 522 aaKnown RBP5.26□□□□□ -1.57
ASM4YDL088C PUB1P32588 453 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57 RIP-Chip
ASM4YDL088C RIM11P38615 370 aa5.25□□□□□ -1.57
ASM4YDL088C MDJ2P42834 146 aa5.25□□□□□ -1.57
ASM4YDL088C INP54Q08227 384 aaKnown RBP5.25□□□□□ -1.57
ASM4YDL088C MNL2Q12205 849 aa5.25□□□□□ -1.57
ASM4YDL088C FLP1P03870 423 aa5.25□□□□□ -1.57
ASM4YDL088C HTS1P07263 546 aaKnown RBP5.25□□□□□ -1.57
ASM4YDL088C DUR3P33413 735 aa5.25□□□□□ -1.57
ASM4YDL088C GCV1P48015 400 aa5.25□□□□□ -1.57
ASM4YDL088C DOT1Q04089 582 aaKnown RBP5.25□□□□□ -1.57
ASM4YDL088C BRE4Q07660 1125 aa5.25□□□□□ -1.57
ASM4YDL088C GPT2P36148 743 aa5.24□□□□□ -1.57
ASM4YDL088C MSH6Q03834 1242 aa5.24□□□□□ -1.57
ASM4YDL088C NUT2Q06213 157 aa5.24□□□□□ -1.57
ASM4YDL088C YIG1Q08956 461 aa5.24□□□□□ -1.57
ASM4YDL088C NSI1Q12457 570 aa5.24□□□□□ -1.57
ASM4YDL088C MMM1P41800 426 aa5.23□□□□□ -1.57
ASM4YDL088C UTP22P53254 1237 aaPredicted RBP5.23□□□□□ -1.57
ASM4YDL088C PMT7Q06644 662 aa5.23□□□□□ -1.57
ASM4YDL088C NOC3Q07896 663 aaPredicted RBP5.23□□□□□ -1.57
ASM4YDL088C FRT1Q99332 602 aa5.23□□□□□ -1.57
ASM4YDL088C MCM5P29496 775 aaKnown RBP5.22□□□□□ -1.57
ASM4YDL088C SAM37P50110 327 aa5.22□□□□□ -1.57
ASM4YDL088C NUT1P53114 1132 aa5.22□□□□□ -1.57
ASM4YDL088C MON1P53129 644 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 101.3 ms