RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	ISU1	Q03020	165 aa		7.08	□□□□□ -1.28
RSA4	YCR072C	YSH1	Q06224	779 aa	Predicted RBP	7.08	□□□□□ -1.28
RSA4	YCR072C	GDB1	Q06625	1536 aa		7.08	□□□□□ -1.28
RSA4	YCR072C	TRK2	P28584	889 aa		7.07	□□□□□ -1.28
RSA4	YCR072C	DLD3	P39976	496 aa	Known RBP	7.07	□□□□□ -1.28
RSA4	YCR072C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.07	□□□□□ -1.28	not detected
RSA4	YCR072C	ATE1	P16639	503 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	TSR4	P25040	408 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	RAD51	P25454	400 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	SPT5	P27692	1063 aa	Known RBP	7.06	□□□□□ -1.28
RSA4	YCR072C	RKM3	P38222	552 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	MRS2	Q01926	470 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	SFI1	Q12369	946 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	SUI2	P20459	304 aa	Known RBP	7.06	□□□□□ -1.28
RSA4	YCR072C	PMC1	P38929	1173 aa	Predicted RBP	7.06	□□□□□ -1.28
RSA4	YCR072C	CEP3	P40969	608 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	PAP2	P53632	584 aa	Known RBP	7.06	□□□□□ -1.28
RSA4	YCR072C	YDL144C	Q07589	356 aa		7.06	□□□□□ -1.28
RSA4	YCR072C	TY3B-I	Q7LHG5	1498 aa	Known RBP	7.05	□□□□□ -1.28
RSA4	YCR072C	SWH1	P35845	1188 aa		7.05	□□□□□ -1.28
RSA4	YCR072C	TY1A-MR1	Q04215	440 aa		7.05	□□□□□ -1.28
RSA4	YCR072C	MCM16	Q12262	181 aa		7.05	□□□□□ -1.28
RSA4	YCR072C	YOL098C	Q12496	1037 aa		7.05	□□□□□ -1.28
RSA4	YCR072C	ULS1	Q08562	1619 aa		7.05	□□□□□ -1.28
RSA4	YCR072C	ISF1	P32488	338 aa		7.04	□□□□□ -1.28
RSA4	YCR072C	STM1	P39015	273 aa	Known RBP	7.04	□□□□□ -1.28
RSA4	YCR072C	EMP47	P43555	445 aa		7.04	□□□□□ -1.28
RSA4	YCR072C	YGL140C	P53120	1219 aa		7.04	□□□□□ -1.28
RSA4	YCR072C	VPS30	Q02948	557 aa		7.04	□□□□□ -1.28
RSA4	YCR072C	SML1	Q04964	104 aa		7.04	□□□□□ -1.28
RSA4	YCR072C	MET5	P47169	1442 aa		7.03	□□□□□ -1.28
RSA4	YCR072C	MIC60	P36112	540 aa		7.03	□□□□□ -1.28
RSA4	YCR072C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	7.03	□□□□□ -1.28	not detected
RSA4	YCR072C	YMR102C	Q03177	834 aa		7.03	□□□□□ -1.28
RSA4	YCR072C	YBL113C	Q7M4S9	792 aa		7.03	□□□□□ -1.28
RSA4	YCR072C	PPG1	P32838	368 aa		7.02	□□□□□ -1.29
RSA4	YCR072C	RPS0A	P32905	252 aa	Known RBP	7.02	□□□□□ -1.29
RSA4	YCR072C	RTT107	P38850	1070 aa		7.02	□□□□□ -1.29
RSA4	YCR072C	YNL108C	P53929	270 aa		7.02	□□□□□ -1.29
RSA4	YCR072C	YNL050C	P53952	270 aa		7.02	□□□□□ -1.29
RSA4	YCR072C	ERV41	Q04651	352 aa		7.02	□□□□□ -1.29
RSA4	YCR072C	MAG2	Q06436	670 aa	Known RBP	7.02	□□□□□ -1.29
RSA4	YCR072C	SEC39	Q12745	709 aa		7.02	□□□□□ -1.29
RSA4	YCR072C	ARO1	P08566	1588 aa	Known RBP	7.02	□□□□□ -1.29
RSA4	YCR072C	RAD3	P06839	778 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	PET111	P08468	800 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	PBY1	P38254	753 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	ISR1	Q06098	443 aa	Known RBP	7.01	□□□□□ -1.29
RSA4	YCR072C	PUS1	Q12211	544 aa	Known RBP	7.01	□□□□□ -1.29
RSA4	YCR072C	YVC1	Q12324	675 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	ROM2	P51862	1356 aa	Known RBP	7.01	□□□□□ -1.29
RSA4	YCR072C	SRS2	P12954	1174 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	SEC20	P28791	383 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	ZUO1	P32527	433 aa	Known RBP	7.01	□□□□□ -1.29
RSA4	YCR072C	VTC4	P47075	721 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	POL32	P47110	350 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	MDM38	Q08179	573 aa		7.01	□□□□□ -1.29
RSA4	YCR072C	CYC8	P14922	966 aa		7	□□□□□ -1.29
RSA4	YCR072C	YDJ1	P25491	409 aa	Known RBP	7	□□□□□ -1.29
RSA4	YCR072C	MSH1	P25846	959 aa		7	□□□□□ -1.29
RSA4	YCR072C	RPN12	P32496	274 aa		7	□□□□□ -1.29
RSA4	YCR072C	RRP14	P36080	434 aa	Known RBP	7	□□□□□ -1.29
RSA4	YCR072C	ERP5	P38819	212 aa		7	□□□□□ -1.29
RSA4	YCR072C	MSC6	Q08818	692 aa	Known RBP	7	□□□□□ -1.29
RSA4	YCR072C	CDC19	P00549	500 aa	Known RBP	6.99	□□□□□ -1.29
RSA4	YCR072C	CIT2	P08679	460 aa		6.99	□□□□□ -1.29
RSA4	YCR072C	VPS41	P38959	992 aa		6.99	□□□□□ -1.29
RSA4	YCR072C	PXR1	P53335	271 aa	Predicted RBP	6.99	□□□□□ -1.29
RSA4	YCR072C	JIP5	Q06214	492 aa	Predicted RBP	6.99	□□□□□ -1.29
RSA4	YCR072C	DPH6	Q12429	685 aa		6.99	□□□□□ -1.29
RSA4	YCR072C	DNF2	Q12675	1612 aa		6.99	□□□□□ -1.29
RSA4	YCR072C	DAT1	P13483	248 aa	Known RBP	6.98	□□□□□ -1.29
RSA4	YCR072C	UTR2	P32623	467 aa		6.98	□□□□□ -1.29
RSA4	YCR072C	BDH2	P39713	417 aa		6.98	□□□□□ -1.29
RSA4	YCR072C	RRT14	P40470	206 aa		6.98	□□□□□ -1.29
RSA4	YCR072C	ALG12	P53730	551 aa		6.98	□□□□□ -1.29
RSA4	YCR072C	OYE2	Q03558	400 aa	Known RBP	6.98	□□□□□ -1.29
RSA4	YCR072C	YOL057W	Q08225	711 aa		6.98	□□□□□ -1.29
RSA4	YCR072C	CCP1	P00431	361 aa		6.97	□□□□□ -1.29
RSA4	YCR072C	RPA135	P22138	1203 aa	Known RBP	6.97	□□□□□ -1.29
RSA4	YCR072C	RIO2	P40160	425 aa	Known RBP	6.97	□□□□□ -1.29
RSA4	YCR072C	AIM21	P40563	679 aa		6.97	□□□□□ -1.29
RSA4	YCR072C	CIR1	P42940	261 aa		6.97	□□□□□ -1.29
RSA4	YCR072C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	6.97	□□□□□ -1.29	not detected
RSA4	YCR072C	APL5	Q08951	932 aa	Known RBP	6.97	□□□□□ -1.29
RSA4	YCR072C	RPO31	P04051	1460 aa		6.97	□□□□□ -1.29
RSA4	YCR072C	ENO1	P00924	437 aa	Known RBP	6.96	□□□□□ -1.29
RSA4	YCR072C	SEC8	P32855	1065 aa		6.96	□□□□□ -1.29
RSA4	YCR072C	RVS167	P39743	482 aa	Known RBP	6.96	□□□□□ -1.29
RSA4	YCR072C	ATG3	P40344	310 aa		6.96	□□□□□ -1.29
RSA4	YCR072C	RSC8	P43609	557 aa	Known RBP	6.96	□□□□□ -1.29
RSA4	YCR072C	LYS5	P50113	272 aa		6.96	□□□□□ -1.29
RSA4	YCR072C	KRE33	P53914	1056 aa	Known RBP	6.96	□□□□□ -1.29
RSA4	YCR072C	SVF1	Q05515	481 aa		6.96	□□□□□ -1.29
RSA4	YCR072C	WTM2	Q12206	467 aa		6.96	□□□□□ -1.29
RSA4	YCR072C	ATG2	P53855	1592 aa		6.96	□□□□□ -1.3
RSA4	YCR072C	KAR3	P17119	729 aa		6.96	□□□□□ -1.3
RSA4	YCR072C	GAL11	P19659	1081 aa		6.96	□□□□□ -1.3
RSA4	YCR072C	DAL1	P32375	460 aa		6.96	□□□□□ -1.3
RSA4	YCR072C	MPE1	P35728	441 aa	Known RBP	6.96	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms