RNA–Protein interactions for RNA: YBR216C

YBP1, Transcript of Protein involved in cellular response to oxidative stress, yeast

Gene YBP1, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YBP1	YBR216C	BIO5	P53744	561 aa	Known RBP	4.15	□□□□□ -1.75
YBP1	YBR216C	ALD3	P54114	506 aa		4.15	□□□□□ -1.75
YBP1	YBR216C	FUS1	P11710	512 aa		4.14	□□□□□ -1.75
YBP1	YBR216C	TFA2	P36145	328 aa		4.14	□□□□□ -1.75
YBP1	YBR216C	BOI1	P38041	980 aa	Known RBP	4.14	□□□□□ -1.75
YBP1	YBR216C	APC11	Q12157	165 aa		4.14	□□□□□ -1.75
YBP1	YBR216C	REC8	Q12188	680 aa		4.14	□□□□□ -1.75
YBP1	YBR216C	CHS2	P14180	963 aa		4.14	□□□□□ -1.75
YBP1	YBR216C	NAM7	P30771	971 aa	Known RBP	4.14	□□□□□ -1.75
YBP1	YBR216C	TOS1	P38288	455 aa		4.14	□□□□□ -1.75
YBP1	YBR216C	NTA1	P40354	457 aa		4.14	□□□□□ -1.75
YBP1	YBR216C	RPB10	P22139	70 aa		4.13	□□□□□ -1.75
YBP1	YBR216C	LIP5	P32875	414 aa		4.13	□□□□□ -1.75
YBP1	YBR216C	KTR2	P33550	425 aa		4.13	□□□□□ -1.75
YBP1	YBR216C	RAD55	P38953	406 aa		4.13	□□□□□ -1.75
YBP1	YBR216C	YGR130C	P53278	816 aa		4.13	□□□□□ -1.75
YBP1	YBR216C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
YBP1	YBR216C	MAE1	P36013	669 aa	Known RBP	4.12	□□□□□ -1.75
YBP1	YBR216C	FUR4	P05316	633 aa	Known RBP	4.12	□□□□□ -1.75
YBP1	YBR216C	SMC1	P32908	1225 aa		4.12	□□□□□ -1.75
YBP1	YBR216C	POL5	P39985	1022 aa	Known RBP	4.12	□□□□□ -1.75
YBP1	YBR216C	NEO1	P40527	1151 aa		4.12	□□□□□ -1.75
YBP1	YBR216C	IRC24	P40580	263 aa		4.12	□□□□□ -1.75
YBP1	YBR216C	SPO71	Q03868	1245 aa		4.12	□□□□□ -1.75
YBP1	YBR216C	TIF6	Q12522	245 aa	Known RBP	4.12	□□□□□ -1.75
YBP1	YBR216C	LSO1	Q3E827	93 aa		4.12	□□□□□ -1.75
YBP1	YBR216C	IRS4	P36115	615 aa	Known RBP	4.11	□□□□□ -1.75
YBP1	YBR216C	ELG1	Q12050	791 aa		4.11	□□□□□ -1.75
YBP1	YBR216C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
YBP1	YBR216C	PSY2	P40164	858 aa		4.11	□□□□□ -1.75
YBP1	YBR216C	AVT1	P47082	602 aa		4.1	□□□□□ -1.75
YBP1	YBR216C	YJR124C	P47159	448 aa		4.1	□□□□□ -1.75
YBP1	YBR216C	CYC7	P00045	113 aa		4.09	□□□□□ -1.75
YBP1	YBR216C	SPO74	P45819	413 aa		4.09	□□□□□ -1.75
YBP1	YBR216C	NCE103	P53615	221 aa		4.09	□□□□□ -1.75
YBP1	YBR216C	BRE4	Q07660	1125 aa		4.09	□□□□□ -1.75
YBP1	YBR216C	BOL3	P39724	118 aa		4.09	□□□□□ -1.76
YBP1	YBR216C	CTH1	P47976	325 aa		4.09	□□□□□ -1.76
YBP1	YBR216C	YNR065C	P53751	1116 aa		4.09	□□□□□ -1.76
YBP1	YBR216C	ERS1	P17261	260 aa		4.08	□□□□□ -1.76
YBP1	YBR216C	PYC2	P32327	1180 aa	Known RBP	4.08	□□□□□ -1.76
YBP1	YBR216C	HAS1	Q03532	505 aa	Known RBP	4.08	□□□□□ -1.76
YBP1	YBR216C	GLO4	Q12320	285 aa		4.08	□□□□□ -1.76
YBP1	YBR216C	MSB1	P21339	1137 aa	Known RBP	4.07	□□□□□ -1.76
YBP1	YBR216C	FET4	P40988	552 aa		4.07	□□□□□ -1.76
YBP1	YBR216C	KIP3	P53086	805 aa	Known RBP	4.07	□□□□□ -1.76
YBP1	YBR216C	SUB2	Q07478	446 aa	Known RBP	4.07	□□□□□ -1.76
YBP1	YBR216C	HVG1	P0CE11	249 aa		4.07	□□□□□ -1.76
YBP1	YBR216C	FAR11	P53917	953 aa		4.07	□□□□□ -1.76
YBP1	YBR216C	MAG2	Q06436	670 aa	Known RBP	4.07	□□□□□ -1.76
YBP1	YBR216C	GIC2	Q06648	383 aa		4.05	□□□□□ -1.76
YBP1	YBR216C	YMR074C	Q04773	145 aa		4.05	□□□□□ -1.76
YBP1	YBR216C	GLO3	P38682	493 aa	Known RBP	4.04	□□□□□ -1.76
YBP1	YBR216C	KAR5	Q04746	504 aa		4.04	□□□□□ -1.76
YBP1	YBR216C	AOS1	Q06624	347 aa		4.04	□□□□□ -1.76
YBP1	YBR216C	YOR223W	Q12015	292 aa		4.04	□□□□□ -1.76
YBP1	YBR216C	RLF2	Q12495	606 aa		4.04	□□□□□ -1.76
YBP1	YBR216C	RPL34A	P87262	121 aa	Predicted RBP	4.03	□□□□□ -1.76
YBP1	YBR216C	ECM2	P38241	364 aa	Known RBP	4.02	□□□□□ -1.77
YBP1	YBR216C	UFD2	P54860	961 aa		4.02	□□□□□ -1.77
YBP1	YBR216C	SDH1	Q00711	640 aa		4.02	□□□□□ -1.77
YBP1	YBR216C	QDR1	P40475	563 aa		4.02	□□□□□ -1.77
YBP1	YBR216C	CTR9	P89105	1077 aa		4.02	□□□□□ -1.77
YBP1	YBR216C	YLL054C	Q12244	843 aa		4.02	□□□□□ -1.77
YBP1	YBR216C	ELM1	P32801	640 aa		4.01	□□□□□ -1.77
YBP1	YBR216C	MMM1	P41800	426 aa		4.01	□□□□□ -1.77
YBP1	YBR216C	GPT2	P36148	743 aa		4	□□□□□ -1.77
YBP1	YBR216C	NSI1	Q12457	570 aa		4	□□□□□ -1.77
YBP1	YBR216C	COB	P00163	385 aa		4	□□□□□ -1.77
YBP1	YBR216C	GCD1	P09032	578 aa	Predicted RBP	4	□□□□□ -1.77
YBP1	YBR216C	WHI3	P34761	661 aa	Known RBP	4	□□□□□ -1.77
YBP1	YBR216C	GCV1	P48015	400 aa		4	□□□□□ -1.77
YBP1	YBR216C	RSC4	Q02206	625 aa		4	□□□□□ -1.77
YBP1	YBR216C	DOT1	Q04089	582 aa	Known RBP	4	□□□□□ -1.77
YBP1	YBR216C	SEA4	P38164	1038 aa		3.99	□□□□□ -1.77
YBP1	YBR216C	CIT3	P43635	486 aa		3.99	□□□□□ -1.77
YBP1	YBR216C	ATG1	P53104	897 aa		3.99	□□□□□ -1.77
YBP1	YBR216C	YIG1	Q08956	461 aa		3.99	□□□□□ -1.77
YBP1	YBR216C	NPR1	P22211	790 aa		3.99	□□□□□ -1.77
YBP1	YBR216C	RIM11	P38615	370 aa		3.99	□□□□□ -1.77
YBP1	YBR216C	CMR1	Q12510	522 aa	Known RBP	3.99	□□□□□ -1.77
YBP1	YBR216C	HTS1	P07263	546 aa	Known RBP	3.97	□□□□□ -1.77
YBP1	YBR216C	POL12	P38121	705 aa	Predicted RBP	3.97	□□□□□ -1.77
YBP1	YBR216C	DUR3	P33413	735 aa		3.97	□□□□□ -1.77
YBP1	YBR216C	LRG1	P35688	1017 aa		3.97	□□□□□ -1.77
YBP1	YBR216C	ACF4	P47129	309 aa		3.97	□□□□□ -1.77
YBP1	YBR216C	RCM1	P53972	490 aa		3.97	□□□□□ -1.77
YBP1	YBR216C	YNL011C	P53980	444 aa		3.97	□□□□□ -1.77
YBP1	YBR216C	TRS120	Q04183	1289 aa		3.97	□□□□□ -1.77
YBP1	YBR216C	YOR059C	Q08448	450 aa	Known RBP	3.97	□□□□□ -1.77
YBP1	YBR216C	PRP5	P21372	849 aa	Predicted RBP	3.96	□□□□□ -1.78
YBP1	YBR216C	RNQ1	P25367	405 aa		3.96	□□□□□ -1.78
YBP1	YBR216C	YHL008C	P38750	627 aa		3.96	□□□□□ -1.78
YBP1	YBR216C	MEC3	Q02574	474 aa		3.96	□□□□□ -1.78
YBP1	YBR216C	MSH6	Q03834	1242 aa		3.96	□□□□□ -1.78
YBP1	YBR216C	BSC2	Q05611	235 aa		3.96	□□□□□ -1.78
YBP1	YBR216C	SEG2	P34250	1132 aa		3.95	□□□□□ -1.78
YBP1	YBR216C	ECL1	P48235	211 aa		3.95	□□□□□ -1.78
YBP1	YBR216C	UTP22	P53254	1237 aa	Predicted RBP	3.95	□□□□□ -1.78
YBP1	YBR216C	DFG16	Q99234	619 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms