RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W ADP1P25371 1049 aa7.21□□□□□ -1.26
SHP1YBL058W PTK1P36002 662 aaPredicted RBP7.21□□□□□ -1.26
SHP1YBL058W ERG7P38604 731 aa7.21□□□□□ -1.26
SHP1YBL058W GLO3P38682 493 aaKnown RBP7.21□□□□□ -1.26
SHP1YBL058W PSF2P40359 213 aa7.21□□□□□ -1.26
SHP1YBL058W APL6P46682 809 aa7.21□□□□□ -1.26
SHP1YBL058W YPP1P46951 817 aa7.21□□□□□ -1.26
SHP1YBL058W NSG2P53898 299 aa7.21□□□□□ -1.26
SHP1YBL058W ULP1Q02724 621 aa7.21□□□□□ -1.26
SHP1YBL058W CSI1Q04368 295 aa7.21□□□□□ -1.26
SHP1YBL058W TAO3P40468 2376 aa7.21□□□□□ -1.26
SHP1YBL058W SEC18P18759 758 aaKnown RBP7.2□□□□□ -1.26
SHP1YBL058W OCT1P35999 772 aa7.2□□□□□ -1.26
SHP1YBL058W CLA4P48562 842 aa7.2□□□□□ -1.26
SHP1YBL058W INM2Q05533 292 aa7.2□□□□□ -1.26
SHP1YBL058W TY3A-GQ12173 290 aa7.2□□□□□ -1.26
SHP1YBL058W TY3A-IQ99219 290 aa7.2□□□□□ -1.26
SHP1YBL058W NOP2P40991 618 aaKnown RBP7.19□□□□□ -1.26
SHP1YBL058W FLO1P32768 1537 aa7.18□□□□□ -1.26
SHP1YBL058W YDJ1P25491 409 aaKnown RBP7.18□□□□□ -1.26
SHP1YBL058W MDL2P33311 773 aa7.18□□□□□ -1.26
SHP1YBL058W HAL5P38970 855 aaKnown RBP7.18□□□□□ -1.26
SHP1YBL058W ACA1P39970 489 aa7.18□□□□□ -1.26
SHP1YBL058W ATG1P53104 897 aa7.18□□□□□ -1.26
SHP1YBL058W EAR1Q03212 550 aa7.18□□□□□ -1.26
SHP1YBL058W RGA2Q06407 1009 aa7.18□□□□□ -1.26
SHP1YBL058W CFT2Q12102 859 aaPredicted RBP7.18□□□□□ -1.26
SHP1YBL058W TUB2P02557 457 aaKnown RBP7.17□□□□□ -1.26
SHP1YBL058W PIF1P07271 859 aa7.17□□□□□ -1.26
SHP1YBL058W VAB2P40003 282 aa7.17□□□□□ -1.26
SHP1YBL058W YMR1P47147 688 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
SHP1YBL058W YNL193WP53870 558 aa7.17□□□□□ -1.26
SHP1YBL058W YVH1Q02256 364 aaKnown RBP7.17□□□□□ -1.26
SHP1YBL058W PCL8Q08966 492 aa7.17□□□□□ -1.26
SHP1YBL058W GYP5Q12344 894 aa7.17□□□□□ -1.26
SHP1YBL058W RRI2Q12348 645 aa7.17□□□□□ -1.26
SHP1YBL058W YPR117WQ06116 2489 aa7.17□□□□□ -1.26
SHP1YBL058W RPP0P05317 312 aaKnown RBP7.16□□□□□ -1.26
SHP1YBL058W CDC60P26637 1090 aaKnown RBP7.16□□□□□ -1.26
SHP1YBL058W YBL028CP38202 106 aa7.16□□□□□ -1.26
SHP1YBL058W MSH4P40965 878 aaPredicted RBP7.16□□□□□ -1.26
SHP1YBL058W VPS62P53285 467 aa7.16□□□□□ -1.26
SHP1YBL058W RPN7Q06103 429 aaKnown RBP7.16□□□□□ -1.26
SHP1YBL058W RPS19AP07280 144 aaKnown RBP7.15□□□□□ -1.26
SHP1YBL058W RPS19BP07281 144 aaPredicted RBP7.15□□□□□ -1.26
SHP1YBL058W DIT2P21595 489 aa7.15□□□□□ -1.26
SHP1YBL058W MCD4P36051 919 aa7.15□□□□□ -1.26
SHP1YBL058W LDH1P38139 375 aa7.15□□□□□ -1.26
SHP1YBL058W VPS29P38759 282 aa7.15□□□□□ -1.26
SHP1YBL058W AIM21P40563 679 aa7.15□□□□□ -1.26
SHP1YBL058W LYS14P40971 790 aa7.15□□□□□ -1.26
SHP1YBL058W ECM30Q06673 1274 aa7.15□□□□□ -1.26
SHP1YBL058W SUB2Q07478 446 aaKnown RBP7.15□□□□□ -1.26
SHP1YBL058W MAK21Q12176 1025 aaKnown RBP7.15□□□□□ -1.26
SHP1YBL058W KIN1P13185 1064 aa7.14□□□□□ -1.27
SHP1YBL058W DBP1P24784 617 aaKnown RBP7.14□□□□□ -1.27
SHP1YBL058W COQ8P27697 501 aa7.14□□□□□ -1.27
SHP1YBL058W WHI3P34761 661 aaKnown RBP7.14□□□□□ -1.27
SHP1YBL058W SNU71P53207 620 aaKnown RBP7.14□□□□□ -1.27
SHP1YBL058W ICL2Q12031 575 aa7.14□□□□□ -1.27
SHP1YBL058W CYB2P00175 591 aa7.13□□□□□ -1.27
SHP1YBL058W SSF1P38789 453 aaPredicted RBP7.13□□□□□ -1.27
SHP1YBL058W YFL040WP43562 540 aa7.13□□□□□ -1.27
SHP1YBL058W SRS2P12954 1174 aa7.12□□□□□ -1.27
SHP1YBL058W RTG1P32607 177 aa7.12□□□□□ -1.27
SHP1YBL058W GRX7P38068 203 aa7.12□□□□□ -1.27
SHP1YBL058W FIR1P40020 876 aa7.12□□□□□ -1.27
SHP1YBL058W MXR1P40029 184 aa7.12□□□□□ -1.27
SHP1YBL058W FMP30Q02883 468 aa7.12□□□□□ -1.27
SHP1YBL058W YDL124WQ07551 312 aaKnown RBP7.12□□□□□ -1.27
SHP1YBL058W DAL5P15365 543 aa7.11□□□□□ -1.27
SHP1YBL058W DLD1P32891 587 aa7.11□□□□□ -1.27
SHP1YBL058W BOI1P38041 980 aaKnown RBP7.11□□□□□ -1.27
SHP1YBL058W VPS27P40343 622 aaKnown RBP7.11□□□□□ -1.27
SHP1YBL058W YJL007CP47080 104 aa7.11□□□□□ -1.27
SHP1YBL058W HGH1P48362 394 aaKnown RBP7.11□□□□□ -1.27
SHP1YBL058W PIP2P52960 996 aa7.11□□□□□ -1.27
SHP1YBL058W KRS1P15180 591 aaKnown RBP7.1□□□□□ -1.27
SHP1YBL058W PER1P25625 357 aa7.1□□□□□ -1.27
SHP1YBL058W STS1P38637 319 aa7.1□□□□□ -1.27
SHP1YBL058W YPR148CQ06523 435 aa7.1□□□□□ -1.27
SHP1YBL058W NCR1Q12200 1170 aa7.1□□□□□ -1.27
SHP1YBL058W PKC1P24583 1151 aa7.09□□□□□ -1.27
SHP1YBL058W GEF1P37020 779 aa7.09□□□□□ -1.27
SHP1YBL058W YPL034WQ03083 165 aa7.09□□□□□ -1.27
SHP1YBL058W KEL3Q08979 651 aaPredicted RBP7.09□□□□□ -1.27
SHP1YBL058W YOR131CQ12486 218 aa7.09□□□□□ -1.27
SHP1YBL058W ERG12P07277 443 aa7.08□□□□□ -1.28
SHP1YBL058W NPL4P33755 580 aa7.08□□□□□ -1.28
SHP1YBL058W KTR3P38130 404 aaPredicted RBP7.08□□□□□ -1.28
SHP1YBL058W CST26P38226 397 aa7.08□□□□□ -1.28
SHP1YBL058W YNG2P38806 282 aaKnown RBP7.08□□□□□ -1.28
SHP1YBL058W ILV3P39522 585 aaKnown RBP7.08□□□□□ -1.28
SHP1YBL058W YIL092WP40497 633 aa7.08□□□□□ -1.28
SHP1YBL058W SPO1P53541 631 aa7.08□□□□□ -1.28
SHP1YBL058W BRE5P53741 515 aaKnown RBP7.08□□□□□ -1.28
SHP1YBL058W YAF9P53930 226 aa7.08□□□□□ -1.28
SHP1YBL058W UBX5Q06682 500 aa7.08□□□□□ -1.28
SHP1YBL058W LAP2Q10740 671 aa7.08□□□□□ -1.28
SHP1YBL058W RVB2Q12464 471 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms