RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	YDR215C	Q12240	137 aa		3.45	□□□□□ -1.86
NCL1	YBL024W	POL32	P47110	350 aa		3.44	□□□□□ -1.86
NCL1	YBL024W	ASF1	P32447	279 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	NTA1	P40354	457 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	THI12	P42883	340 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	THI5	P43534	340 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	THI11	P47183	340 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	THI13	Q07748	340 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	YCK2	P23292	546 aa	Known RBP	3.43	□□□□□ -1.86
NCL1	YBL024W	MET10	P39692	1035 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	SLN1	P39928	1220 aa	Predicted RBP	3.43	□□□□□ -1.86
NCL1	YBL024W	PRY1	P47032	299 aa		3.43	□□□□□ -1.86
NCL1	YBL024W	ORC1	P54784	914 aa	Predicted RBP	3.43	□□□□□ -1.86
NCL1	YBL024W	MRP10	O75012	95 aa		3.42	□□□□□ -1.86
NCL1	YBL024W	SBP1	P10080	294 aa	Known RBP	3.42	□□□□□ -1.86
NCL1	YBL024W	IRS4	P36115	615 aa	Known RBP	3.42	□□□□□ -1.86
NCL1	YBL024W	RRM3	P38766	723 aa		3.42	□□□□□ -1.86
NCL1	YBL024W	RGD2	P43556	714 aa		3.42	□□□□□ -1.86
NCL1	YBL024W	EMG1	Q06287	252 aa	Known RBP	3.42	□□□□□ -1.86
NCL1	YBL024W	MET4	P32389	672 aa		3.42	□□□□□ -1.86
NCL1	YBL024W	PSY2	P40164	858 aa		3.42	□□□□□ -1.86
NCL1	YBL024W	SOK2	P53438	785 aa	Predicted RBP	3.42	□□□□□ -1.86
NCL1	YBL024W	UFD2	P54860	961 aa		3.42	□□□□□ -1.86
NCL1	YBL024W	GIP2	P40036	548 aa		3.41	□□□□□ -1.86
NCL1	YBL024W	TED1	P40533	473 aa		3.41	□□□□□ -1.86
NCL1	YBL024W	BUD9	P53226	547 aa		3.41	□□□□□ -1.86
NCL1	YBL024W	GPI13	Q07830	1017 aa		3.41	□□□□□ -1.86
NCL1	YBL024W	TIF6	Q12522	245 aa	Known RBP	3.41	□□□□□ -1.86
NCL1	YBL024W	FUS1	P11710	512 aa		3.4	□□□□□ -1.86
NCL1	YBL024W	SEC8	P32855	1065 aa		3.4	□□□□□ -1.86
NCL1	YBL024W	KTR2	P33550	425 aa		3.4	□□□□□ -1.86
NCL1	YBL024W	INP51	P40559	946 aa	Known RBP	3.4	□□□□□ -1.86
NCL1	YBL024W	LEM3	P42838	414 aa		3.4	□□□□□ -1.86
NCL1	YBL024W	TRS120	Q04183	1289 aa		3.4	□□□□□ -1.86
NCL1	YBL024W	SAC7	P17121	654 aa		3.4	□□□□□ -1.87
NCL1	YBL024W	ECM2	P38241	364 aa	Known RBP	3.4	□□□□□ -1.87
NCL1	YBL024W	LSB6	P42951	607 aa		3.4	□□□□□ -1.87
NCL1	YBL024W	GUP1	P53154	560 aa		3.4	□□□□□ -1.87
NCL1	YBL024W	MCA1	Q08601	432 aa		3.4	□□□□□ -1.87
NCL1	YBL024W	AI3	P03877	415 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	SFA1	P32771	386 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	AMN1	P38285	549 aa	Predicted RBP	3.39	□□□□□ -1.87
NCL1	YBL024W	YPL034W	Q03083	165 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	OYE2	Q03558	400 aa	Known RBP	3.39	□□□□□ -1.87
NCL1	YBL024W	SOG2	Q08817	791 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	MNL2	Q12205	849 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	RSC6	P25632	483 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	NEO1	P40527	1151 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	YJR107W	P47145	328 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	BIO5	P53744	561 aa	Known RBP	3.39	□□□□□ -1.87
NCL1	YBL024W	DSE4	P53753	1117 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	ALD3	P54114	506 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	GAS5	Q08193	484 aa		3.39	□□□□□ -1.87
NCL1	YBL024W	TY4B-P	A0A0B7P3V8	1104 aa		3.38	□□□□□ -1.87
NCL1	YBL024W	COQ2	P32378	372 aa		3.38	□□□□□ -1.87
NCL1	YBL024W	TY4A-H	Q6Q5P6	413 aa		3.38	□□□□□ -1.87
NCL1	YBL024W	PHO4	P07270	312 aa	Known RBP	3.37	□□□□□ -1.87
NCL1	YBL024W	MGE1	P38523	228 aa		3.37	□□□□□ -1.87
NCL1	YBL024W	PAN5	P38787	379 aa		3.37	□□□□□ -1.87
NCL1	YBL024W	SPO71	Q03868	1245 aa		3.37	□□□□□ -1.87
NCL1	YBL024W	PYC2	P32327	1180 aa	Known RBP	3.37	□□□□□ -1.87
NCL1	YBL024W	ARI1	P53111	347 aa	Known RBP	3.37	□□□□□ -1.87
NCL1	YBL024W	TFA2	P36145	328 aa		3.36	□□□□□ -1.87
NCL1	YBL024W	FYV10	P40492	516 aa		3.36	□□□□□ -1.87
NCL1	YBL024W	FET4	P40988	552 aa		3.36	□□□□□ -1.87
NCL1	YBL024W	MCM2	P29469	868 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	RPT1	P33299	467 aa	Known RBP	3.35	□□□□□ -1.87
NCL1	YBL024W	MAE1	P36013	669 aa	Known RBP	3.35	□□□□□ -1.87
NCL1	YBL024W	DAK2	P43550	591 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	YJR124C	P47159	448 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	RSC4	Q02206	625 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	GLO4	Q12320	285 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	YNL011C	P53980	444 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	SVF1	Q05515	481 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	BSC2	Q05611	235 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	ELG1	Q12050	791 aa		3.35	□□□□□ -1.87
NCL1	YBL024W	TY1A-NL1	Q12391	440 aa	Known RBP	3.35	□□□□□ -1.87
NCL1	YBL024W	YHL008C	P38750	627 aa		3.34	□□□□□ -1.87
NCL1	YBL024W	FAR11	P53917	953 aa		3.34	□□□□□ -1.87
NCL1	YBL024W	CDC55	Q00362	526 aa		3.34	□□□□□ -1.87
NCL1	YBL024W	SPR28	Q04921	423 aa		3.34	□□□□□ -1.87
NCL1	YBL024W	AIM44	Q99299	758 aa		3.34	□□□□□ -1.87
NCL1	YBL024W	YNR065C	P53751	1116 aa		3.34	□□□□□ -1.88
NCL1	YBL024W	HAS1	Q03532	505 aa	Known RBP	3.34	□□□□□ -1.88
NCL1	YBL024W	YMR074C	Q04773	145 aa		3.34	□□□□□ -1.88
NCL1	YBL024W	JIP5	Q06214	492 aa	Predicted RBP	3.34	□□□□□ -1.88
NCL1	YBL024W	MAG2	Q06436	670 aa	Known RBP	3.34	□□□□□ -1.88
NCL1	YBL024W	MAC1	P35192	417 aa		3.33	□□□□□ -1.88
NCL1	YBL024W	AKR1	P39010	764 aa		3.33	□□□□□ -1.88
NCL1	YBL024W	POL5	P39985	1022 aa	Known RBP	3.33	□□□□□ -1.88
NCL1	YBL024W	TOS4	Q06266	489 aa		3.33	□□□□□ -1.88
NCL1	YBL024W	YLL054C	Q12244	843 aa		3.33	□□□□□ -1.88
NCL1	YBL024W	KAE1	P36132	386 aa		3.32	□□□□□ -1.88
NCL1	YBL024W	SAM37	P50110	327 aa		3.32	□□□□□ -1.88
NCL1	YBL024W	REC8	Q12188	680 aa		3.32	□□□□□ -1.88
NCL1	YBL024W	GCD6	P32501	712 aa	Known RBP	3.32	□□□□□ -1.88
NCL1	YBL024W	PGM1	P33401	570 aa	Known RBP	3.32	□□□□□ -1.88
NCL1	YBL024W	VPS35	P34110	944 aa		3.32	□□□□□ -1.88
NCL1	YBL024W	SAF1	P38352	637 aa		3.32	□□□□□ -1.88
NCL1	YBL024W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.32	□□□□□ -1.88	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms