RNA–Protein interactions for RNA: YBL005W

PDR3, Transcript of Transcriptional activator of the pleiotropic drug resistance network, yeast

Gene PDR3, Length 2,931 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR3	YBL005W	RAD53	P22216	821 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	NGR1	P32831	672 aa	Known RBP	3.13	□□□□□ -1.91
PDR3	YBL005W	TIF11	P38912	153 aa	Known RBP	3.13	□□□□□ -1.91
PDR3	YBL005W	VNX1	P42839	908 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	MPP10	P47083	593 aa	Known RBP	3.13	□□□□□ -1.91
PDR3	YBL005W	DLD1	P32891	587 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	UBP12	P39538	1254 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	FUN12	P39730	1002 aa	Known RBP	3.13	□□□□□ -1.91
PDR3	YBL005W	FIR1	P40020	876 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	PSF2	P40359	213 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
PDR3	YBL005W	PUS6	P53294	404 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	SUB2	Q07478	446 aa	Known RBP	3.13	□□□□□ -1.91
PDR3	YBL005W	MET7	Q08645	548 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	SPB4	P25808	606 aa	Predicted RBP	3.13	□□□□□ -1.91
PDR3	YBL005W	ULI1	P43604	169 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	RTT109	Q07794	436 aa		3.13	□□□□□ -1.91
PDR3	YBL005W	CFT2	Q12102	859 aa	Predicted RBP	3.13	□□□□□ -1.91
PDR3	YBL005W	PMA1	P05030	918 aa	Known RBP	3.12	□□□□□ -1.91
PDR3	YBL005W	RPS7A	P26786	190 aa	Known RBP	3.12	□□□□□ -1.91
PDR3	YBL005W	VPS62	P53285	467 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	FCP1	Q03254	732 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	ERG12	P07277	443 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	HEM1	P09950	548 aa	Predicted RBP	3.12	□□□□□ -1.91
PDR3	YBL005W	SNF3	P10870	884 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	PKC1	P24583	1151 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	MCD4	P36051	919 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	BOI2	P39969	1040 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	ULP1	Q02724	621 aa		3.12	□□□□□ -1.91
PDR3	YBL005W	KIN1	P13185	1064 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
PDR3	YBL005W	DBP1	P24784	617 aa	Known RBP	3.11	□□□□□ -1.91
PDR3	YBL005W	SEC20	P28791	383 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	GPB2	P39717	880 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	ATG1	P53104	897 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	ZDS2	P54786	942 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	GYP5	Q12344	894 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	RPS19A	P07280	144 aa	Known RBP	3.11	□□□□□ -1.91
PDR3	YBL005W	RPS19B	P07281	144 aa	Predicted RBP	3.11	□□□□□ -1.91
PDR3	YBL005W	ADP1	P25371	1049 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	RGT1	P32862	1170 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	YVH1	Q02256	364 aa	Known RBP	3.11	□□□□□ -1.91
PDR3	YBL005W	YPL034W	Q03083	165 aa		3.11	□□□□□ -1.91
PDR3	YBL005W	MDM20	Q12387	796 aa	Known RBP	3.11	□□□□□ -1.91
PDR3	YBL005W	KEL1	P38853	1164 aa	Known RBP	3.1	□□□□□ -1.91
PDR3	YBL005W	PNT1	P38969	423 aa		3.1	□□□□□ -1.91
PDR3	YBL005W	TIF4631	P39935	952 aa	Known RBP	3.1	□□□□□ -1.91
PDR3	YBL005W	ACA1	P39970	489 aa		3.1	□□□□□ -1.91
PDR3	YBL005W	PIP2	P52960	996 aa		3.1	□□□□□ -1.91
PDR3	YBL005W	ECM29	P38737	1868 aa		3.1	□□□□□ -1.91
PDR3	YBL005W	LAM4	P38800	1345 aa		3.1	□□□□□ -1.91
PDR3	YBL005W	CST26	P38226	397 aa		3.1	□□□□□ -1.91
PDR3	YBL005W	OSH3	P38713	996 aa	Known RBP	3.1	□□□□□ -1.91
PDR3	YBL005W	SOL4	P53315	255 aa		3.1	□□□□□ -1.91
PDR3	YBL005W	TPD3	P31383	635 aa		3.09	□□□□□ -1.91
PDR3	YBL005W	GSM1	P42950	618 aa		3.09	□□□□□ -1.91
PDR3	YBL005W	ENP2	P48234	707 aa	Known RBP	3.09	□□□□□ -1.91
PDR3	YBL005W	YDL144C	Q07589	356 aa		3.09	□□□□□ -1.91
PDR3	YBL005W	GCD7	P32502	381 aa	Predicted RBP	3.09	□□□□□ -1.91
PDR3	YBL005W	GLO3	P38682	493 aa	Known RBP	3.09	□□□□□ -1.91
PDR3	YBL005W	VPS27	P40343	622 aa	Known RBP	3.09	□□□□□ -1.91
PDR3	YBL005W	IOC3	P43596	787 aa		3.09	□□□□□ -1.91
PDR3	YBL005W	YJL007C	P47080	104 aa		3.09	□□□□□ -1.91
PDR3	YBL005W	TOS4	Q06266	489 aa		3.09	□□□□□ -1.91
PDR3	YBL005W	CDC45	Q08032	650 aa		3.09	□□□□□ -1.91
PDR3	YBL005W	CDC19	P00549	500 aa	Known RBP	3.09	□□□□□ -1.92
PDR3	YBL005W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.92	not detected
PDR3	YBL005W	EUG1	P32474	517 aa		3.09	□□□□□ -1.92
PDR3	YBL005W	BOI1	P38041	980 aa	Known RBP	3.09	□□□□□ -1.92
PDR3	YBL005W	CLF1	Q12309	687 aa	Predicted RBP	3.09	□□□□□ -1.92
PDR3	YBL005W	LDB19	Q12502	818 aa		3.09	□□□□□ -1.92
PDR3	YBL005W	MOT1	P32333	1867 aa		3.08	□□□□□ -1.92
PDR3	YBL005W	YGR125W	P53273	1036 aa		3.08	□□□□□ -1.92
PDR3	YBL005W	YNR014W	P53719	212 aa		3.08	□□□□□ -1.92
PDR3	YBL005W	YML020W	Q03722	664 aa		3.08	□□□□□ -1.92
PDR3	YBL005W	NCB2	Q92317	146 aa		3.08	□□□□□ -1.92
PDR3	YBL005W	SEC8	P32855	1065 aa		3.08	□□□□□ -1.92
PDR3	YBL005W	PTK1	P36002	662 aa	Predicted RBP	3.08	□□□□□ -1.92
PDR3	YBL005W	YBL028C	P38202	106 aa		3.08	□□□□□ -1.92
PDR3	YBL005W	UBR2	Q07963	1872 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	POL3	P15436	1097 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	RAD24	P32641	659 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	PAM1	P37304	830 aa	Known RBP	3.07	□□□□□ -1.92
PDR3	YBL005W	YBR287W	P38355	427 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	TOM71	P38825	639 aa	Known RBP	3.07	□□□□□ -1.92
PDR3	YBL005W	YJR107W	P47145	328 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	RRI2	Q12348	645 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	RIF1	P29539	1916 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	SNA3	P14359	133 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	GPT2	P36148	743 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	KSP1	P38691	1029 aa	Known RBP	3.07	□□□□□ -1.92
PDR3	YBL005W	VPS53	P47061	822 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	ALD6	P54115	500 aa	Known RBP	3.07	□□□□□ -1.92
PDR3	YBL005W	SKG3	Q06315	1026 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	PDR18	P53756	1333 aa		3.07	□□□□□ -1.92
PDR3	YBL005W	YDJ1	P25491	409 aa	Known RBP	3.06	□□□□□ -1.92
PDR3	YBL005W	MDL2	P33311	773 aa		3.06	□□□□□ -1.92
PDR3	YBL005W	UIP5	P36137	443 aa		3.06	□□□□□ -1.92
PDR3	YBL005W	GRS1	P38088	690 aa	Known RBP	3.06	□□□□□ -1.92
PDR3	YBL005W	BMT6	Q12291	365 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms