RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 QRICH2Q9H0J4 1663 aa18.44■□□□□ 0.54
SCARB2-221ENST00000640341 PLEKHF1Q96S99 279 aa18.43■□□□□ 0.54
SCARB2-221ENST00000640341 NRXN1Q9ULB1 1477 aa18.43■□□□□ 0.54
SCARB2-221ENST00000640341 IQSEC2Q5JU85 1478 aa18.42■□□□□ 0.54
SCARB2-221ENST00000640341 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
SCARB2-221ENST00000640341 ANKRD45Q5TZF3 282 aa18.41■□□□□ 0.54
SCARB2-221ENST00000640341 SHPRHQ149N8 1683 aa18.4■□□□□ 0.54
SCARB2-221ENST00000640341 AAMPQ13685 434 aa18.4■□□□□ 0.54
SCARB2-221ENST00000640341 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
SCARB2-221ENST00000640341 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
SCARB2-221ENST00000640341 TULP4Q9NRJ4 1543 aa18.39■□□□□ 0.54
SCARB2-221ENST00000640341 PHACTR3Q96KR7 559 aa18.39■□□□□ 0.53
SCARB2-221ENST00000640341 HSP90AA1P07900 732 aaKnown RBP18.39■□□□□ 0.53
SCARB2-221ENST00000640341 SOX12O15370 315 aa18.38■□□□□ 0.53
SCARB2-221ENST00000640341 HSCBQ8IWL3 235 aa18.38■□□□□ 0.53
SCARB2-221ENST00000640341 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
SCARB2-221ENST00000640341 EMILIN1Q9Y6C2 1016 aa18.38■□□□□ 0.53
SCARB2-221ENST00000640341 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
SCARB2-221ENST00000640341 TSPYL6Q8N831 410 aa18.37■□□□□ 0.53
SCARB2-221ENST00000640341 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
SCARB2-221ENST00000640341 GLI2P10070 1586 aa18.36■□□□□ 0.53
SCARB2-221ENST00000640341 NSD2O96028 1365 aa18.36■□□□□ 0.53
SCARB2-221ENST00000640341 ABCC11Q96J66 1382 aa18.36■□□□□ 0.53
SCARB2-221ENST00000640341 APBB1O00213 710 aa18.36■□□□□ 0.53
SCARB2-221ENST00000640341 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
SCARB2-221ENST00000640341 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
SCARB2-221ENST00000640341 NCKAP5LQ9HCH0 1330 aa18.35■□□□□ 0.53
SCARB2-221ENST00000640341 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
SCARB2-221ENST00000640341 SLC52A1Q9NWF4 448 aa18.35■□□□□ 0.53
SCARB2-221ENST00000640341 KIF16BQ96L93 1317 aa18.35■□□□□ 0.53
SCARB2-221ENST00000640341 SETBP1Q9Y6X0 1596 aa18.35■□□□□ 0.53
SCARB2-221ENST00000640341 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
SCARB2-221ENST00000640341 HDAC1Q13547 482 aaPredicted RBP18.34■□□□□ 0.53
SCARB2-221ENST00000640341 ABCC3O15438 1527 aa18.34■□□□□ 0.53
SCARB2-221ENST00000640341 FAM83GA6ND36 823 aa18.34■□□□□ 0.53
SCARB2-221ENST00000640341 IFT172Q9UG01 1749 aa18.33■□□□□ 0.52
SCARB2-221ENST00000640341 CT47B1P0C2W7 299 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-221ENST00000640341 POLKQ9UBT6 870 aa18.33■□□□□ 0.52
SCARB2-221ENST00000640341 ATAD2Q6PL18 1390 aa18.33■□□□□ 0.52
SCARB2-221ENST00000640341 HSP90AB1P08238 724 aaKnown RBP18.33■□□□□ 0.52
SCARB2-221ENST00000640341 NME9Q86XW9 330 aa18.33■□□□□ 0.52
SCARB2-221ENST00000640341 FRMPD1Q5SYB0 1578 aa18.33■□□□□ 0.52
SCARB2-221ENST00000640341 MCM4P33991 863 aa18.32■□□□□ 0.52
SCARB2-221ENST00000640341 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
SCARB2-221ENST00000640341 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
SCARB2-221ENST00000640341 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
SCARB2-221ENST00000640341 MYO3AQ8NEV4 1616 aa18.32■□□□□ 0.52
SCARB2-221ENST00000640341 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
SCARB2-221ENST00000640341 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
SCARB2-221ENST00000640341 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
SCARB2-221ENST00000640341 PPLO60437 1756 aa18.31■□□□□ 0.52
SCARB2-221ENST00000640341 FCHSD2O94868 740 aa18.3■□□□□ 0.52
SCARB2-221ENST00000640341 PANK2Q9BZ23 570 aa18.3■□□□□ 0.52
SCARB2-221ENST00000640341 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
SCARB2-221ENST00000640341 MLH3Q9UHC1 1453 aa18.3■□□□□ 0.52
SCARB2-221ENST00000640341 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
SCARB2-221ENST00000640341 GOLGA6L3A6NEY3 463 aa18.29■□□□□ 0.52
SCARB2-221ENST00000640341 PUS7Q96PZ0 661 aaKnown RBP18.29■□□□□ 0.52
SCARB2-221ENST00000640341 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
SCARB2-221ENST00000640341 TRAK2O60296 914 aa18.29■□□□□ 0.52
SCARB2-221ENST00000640341 NUCB1Q02818 461 aa18.29■□□□□ 0.52
SCARB2-221ENST00000640341 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
SCARB2-221ENST00000640341 PLPPR3Q6T4P5 718 aa18.28■□□□□ 0.52
SCARB2-221ENST00000640341 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
SCARB2-221ENST00000640341 CAMSAP1Q5T5Y3 1602 aa18.28■□□□□ 0.52
SCARB2-221ENST00000640341 TWISTNBQ3B726 338 aaPredicted RBP18.27■□□□□ 0.52
SCARB2-221ENST00000640341 MBIPQ9NS73 344 aa18.27■□□□□ 0.52
SCARB2-221ENST00000640341 VAMP4O75379 141 aa18.26■□□□□ 0.51
SCARB2-221ENST00000640341 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
SCARB2-221ENST00000640341 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
SCARB2-221ENST00000640341 L1TD1Q5T7N2 865 aaKnown RBP18.26■□□□□ 0.51
SCARB2-221ENST00000640341 HECW2Q9P2P5 1572 aa18.26■□□□□ 0.51
SCARB2-221ENST00000640341 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
SCARB2-221ENST00000640341 C8orf58Q8NAV2 365 aa18.26■□□□□ 0.51
SCARB2-221ENST00000640341 IL16Q14005 1332 aa18.25■□□□□ 0.51
SCARB2-221ENST00000640341 ZBTB7BO15156 539 aaPredicted RBP18.24■□□□□ 0.51
SCARB2-221ENST00000640341 XRCC6P12956 609 aaKnown RBP eCLIP18.24■□□□□ 0.51
SCARB2-221ENST00000640341 ALDH1L2Q3SY69 923 aa18.24■□□□□ 0.51
SCARB2-221ENST00000640341 SIGLEC1Q9BZZ2 1709 aa18.23■□□□□ 0.51
SCARB2-221ENST00000640341 GNAI1P63096 354 aa18.23■□□□□ 0.51
SCARB2-221ENST00000640341 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
SCARB2-221ENST00000640341 ARHGEF28Q8N1W1 1705 aaKnown RBP18.22■□□□□ 0.51
SCARB2-221ENST00000640341 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
SCARB2-221ENST00000640341 COG3Q96JB2 828 aa18.22■□□□□ 0.51
SCARB2-221ENST00000640341 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
SCARB2-221ENST00000640341 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
SCARB2-221ENST00000640341 FAM69CQ0P6D2 419 aa18.21■□□□□ 0.51
SCARB2-221ENST00000640341 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
SCARB2-221ENST00000640341 SIRT2Q8IXJ6 389 aa18.2■□□□□ 0.5
SCARB2-221ENST00000640341 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-221ENST00000640341 RRAGDQ9NQL2 400 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-221ENST00000640341 PTPRMP28827 1452 aa18.2■□□□□ 0.5
SCARB2-221ENST00000640341 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
SCARB2-221ENST00000640341 MCM10Q7L590 875 aa18.19■□□□□ 0.5
SCARB2-221ENST00000640341 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
SCARB2-221ENST00000640341 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
SCARB2-221ENST00000640341 MIS18AQ9NYP9 233 aa18.19■□□□□ 0.5
SCARB2-221ENST00000640341 COL3A1P02461 1466 aaPredicted RBP18.19■□□□□ 0.5
SCARB2-221ENST00000640341 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
SCARB2-221ENST00000640341 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms