RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 FANCAO15360 1455 aa10.28□□□□□ -0.76
HNRNPU-222ENST00000639880 UHRF1BP1Q6BDS2 1440 aa10.28□□□□□ -0.76
HNRNPU-222ENST00000639880 NEK4P51957 841 aa10.28□□□□□ -0.76
HNRNPU-222ENST00000639880 NFE2L2Q16236 605 aa10.28□□□□□ -0.76
HNRNPU-222ENST00000639880 RTEL1-TNFRSF6BF6WH68 1400 aa10.27□□□□□ -0.76
HNRNPU-222ENST00000639880 ARHGEF12Q9NZN5 1544 aa10.27□□□□□ -0.76
HNRNPU-222ENST00000639880 HSP90B1P14625 803 aaKnown RBP10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 SLC26A8Q96RN1 970 aa10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 MIS18AQ9NYP9 233 aa10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 HDAC5Q9UQL6 1122 aa10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 RLBP1P12271 317 aa10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 CAVIN1Q6NZI2 390 aaKnown RBP10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 ASXL1Q8IXJ9 1541 aa10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 PLCH2O75038 1416 aa10.27□□□□□ -0.77
HNRNPU-222ENST00000639880 C1orf141Q5JVX7 400 aa10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 NME9Q86XW9 330 aa10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 CD109Q6YHK3 1445 aa10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 DMRT2Q9Y5R5 561 aa10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 A2MP01023 1474 aa10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 UBTFL1P0CB47 393 aaPredicted RBP10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 RNF214Q8ND24 703 aa10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 GCC2Q8IWJ2 1684 aa10.26□□□□□ -0.77
HNRNPU-222ENST00000639880 HSP90AA2PQ14568 343 aaPredicted RBP10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 SURF6O75683 361 aaKnown RBP10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 NASPP49321 788 aaPredicted RBP10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 GORABQ5T7V8 394 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 MCM10Q7L590 875 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 ZNF428Q96B54 188 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 K7ELQ4 463 aaPredicted RBP10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 PRPF40AO75400 957 aaKnown RBP10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 PHF14O94880 888 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 SEC24BO95487 1268 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 PSME1Q06323 249 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 NUDT16Q96DE0 195 aaKnown RBP10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 ADGRL2O95490 1459 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
HNRNPU-222ENST00000639880 NUP160Q12769 1436 aa10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 COL17A1Q9UMD9 1497 aaPredicted RBP10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 IFIT2P09913 472 aaKnown RBP10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 SHANK2Q9UPX8 1470 aa10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 KDM5BQ9UGL1 1544 aa10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 RABEP1Q15276 862 aa10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 AIMP1Q12904 312 aaKnown RBP10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 ABTB2Q8N961 1025 aa10.24□□□□□ -0.77
HNRNPU-222ENST00000639880 EIF4G3O43432 1585 aaKnown RBP10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 FAM43AQ8N2R8 423 aa10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 PBRM1Q86U86 1689 aa10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 GNAI3P08754 354 aa10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 VPS37CA5D8V6 355 aaPredicted RBP10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 GOLGA6L6A8MZA4 724 aa10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 FYB1O15117 783 aa10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 GNAI2P04899 355 aa10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 ZKSCAN1P17029 563 aaPredicted RBP10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 TBC1D32Q96NH3 1257 aa10.23□□□□□ -0.77
HNRNPU-222ENST00000639880 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 GNL2Q13823 731 aaKnown RBP10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 CCDC30Q5VVM6 783 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 CSPP1Q1MSJ5 1256 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 EXOC6BQ9Y2D4 811 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 GAS2L2Q8NHY3 880 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 ATP6V1DQ9Y5K8 247 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 GRPEL1Q9HAV7 217 aa10.22□□□□□ -0.77
HNRNPU-222ENST00000639880 NRDCO43847 1150 aa10.21□□□□□ -0.77
HNRNPU-222ENST00000639880 NEXNQ0ZGT2 675 aa10.21□□□□□ -0.77
HNRNPU-222ENST00000639880 ALDH1L2Q3SY69 923 aa10.21□□□□□ -0.77
HNRNPU-222ENST00000639880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.21□□□□□ -0.78
HNRNPU-222ENST00000639880 TAF7LQ5H9L4 462 aa10.21□□□□□ -0.78
HNRNPU-222ENST00000639880 HDGFL1Q5TGJ6 251 aa10.21□□□□□ -0.78
HNRNPU-222ENST00000639880 SMC3Q9UQE7 1217 aa10.21□□□□□ -0.78
HNRNPU-222ENST00000639880 MAP4K4O95819 1239 aaPredicted RBP10.21□□□□□ -0.78
HNRNPU-222ENST00000639880 IL1RAPL2Q9NP60 686 aa10.21□□□□□ -0.78
HNRNPU-222ENST00000639880 ERC2O15083 957 aa10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 HTATSF1O43719 755 aaKnown RBP10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 G3BP1Q13283 466 aaKnown RBP eCLIP10.2□□□□□ -0.787e-8■■□□□ 13.7
HNRNPU-222ENST00000639880 POLR3AO14802 1390 aaPredicted RBP10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 ABCC11Q96J66 1382 aa10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 PIK3C2GO75747 1445 aa10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 F6X3S4 739 aa10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 H3BQV1 296 aa10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 IFFO2Q5TF58 517 aa10.2□□□□□ -0.78
HNRNPU-222ENST00000639880 CCDC27Q2M243 656 aa10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 LRRCC1Q9C099 1032 aa10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 IFT57Q9NWB7 429 aa10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 TARBP1Q13395 1621 aaKnown RBP10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 RPAP2Q8IXW5 612 aaPredicted RBP10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 FAM184AQ8NB25 1140 aa10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 CCT4P50991 539 aaKnown RBP10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 CLASRPQ8N2M8 674 aaKnown RBP10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 KDM2BQ8NHM5 1336 aa10.19□□□□□ -0.78
HNRNPU-222ENST00000639880 MBIPQ9NS73 344 aa10.18□□□□□ -0.78
HNRNPU-222ENST00000639880 FAM13BQ9NYF5 915 aa10.18□□□□□ -0.78
HNRNPU-222ENST00000639880 MPNDQ8N594 471 aa10.18□□□□□ -0.78
HNRNPU-222ENST00000639880 NPHP1O15259 732 aa10.18□□□□□ -0.78
HNRNPU-222ENST00000639880 TTC5Q8N0Z6 440 aa10.18□□□□□ -0.78
HNRNPU-222ENST00000639880 DDX58O95786 925 aaKnown RBP10.18□□□□□ -0.78
HNRNPU-222ENST00000639880 HSP90AB4PQ58FF6 505 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms